RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 ARHGAP5Q13017 1502 aa25.87■■□□□ 1.73
SSNA1-204ENST00000464553 ZMYM4Q5VZL5 1548 aa25.86■■□□□ 1.73
SSNA1-204ENST00000464553 POGZQ7Z3K3 1410 aa25.86■■□□□ 1.73
SSNA1-204ENST00000464553 RICTORQ6R327 1708 aa25.85■■□□□ 1.73
SSNA1-204ENST00000464553 VPS8Q8N3P4 1428 aa25.84■■□□□ 1.73
SSNA1-204ENST00000464553 ZNF518AQ6AHZ1 1483 aa25.81■■□□□ 1.72
SSNA1-204ENST00000464553 PREX2Q70Z35 1606 aa25.8■■□□□ 1.72
SSNA1-204ENST00000464553 CCNB3Q8WWL7 1395 aa25.79■■□□□ 1.72
SSNA1-204ENST00000464553 GPATCH8Q9UKJ3 1502 aaKnown RBP25.78■■□□□ 1.72
SSNA1-204ENST00000464553 CDC42BPBQ9Y5S2 1711 aa25.78■■□□□ 1.72
SSNA1-204ENST00000464553 ARHGEF40Q8TER5 1519 aa25.77■■□□□ 1.72
SSNA1-204ENST00000464553 AFAP1Q8N556 730 aa25.76■■□□□ 1.71
SSNA1-204ENST00000464553 CFDP1Q9UEE9 299 aaPredicted RBP25.76■■□□□ 1.71
SSNA1-204ENST00000464553 EHBP1L1Q8N3D4 1523 aa25.76■■□□□ 1.71
SSNA1-204ENST00000464553 ZFYVE16Q7Z3T8 1539 aa25.75■■□□□ 1.71
SSNA1-204ENST00000464553 ARID4BQ4LE39 1312 aaPredicted RBP25.74■■□□□ 1.71
SSNA1-204ENST00000464553 MAP3K1Q13233 1512 aa25.73■■□□□ 1.71
SSNA1-204ENST00000464553 KIAA1107Q9UPP5 1409 aa25.72■■□□□ 1.71
SSNA1-204ENST00000464553 CDC42BPAQ5VT25 1732 aa25.72■■□□□ 1.71
SSNA1-204ENST00000464553 ATP10AO60312 1499 aa25.72■■□□□ 1.71
SSNA1-204ENST00000464553 PLEKHH2Q8IVE3 1493 aa25.72■■□□□ 1.71
SSNA1-204ENST00000464553 YEATS2Q9ULM3 1422 aa25.71■■□□□ 1.71
SSNA1-204ENST00000464553 KDM5CP41229 1560 aa25.71■■□□□ 1.71
SSNA1-204ENST00000464553 MLH3Q9UHC1 1453 aa25.7■■□□□ 1.7
SSNA1-204ENST00000464553 ABCC1P33527 1531 aa25.69■■□□□ 1.7
SSNA1-204ENST00000464553 ZNF777Q9ULD5 760 aaPredicted RBP25.69■■□□□ 1.7
SSNA1-204ENST00000464553 TIAM1Q13009 1591 aa25.68■■□□□ 1.7
SSNA1-204ENST00000464553 ARHGEF12Q9NZN5 1544 aa25.68■■□□□ 1.7
SSNA1-204ENST00000464553 TRAPPC8Q9Y2L5 1435 aa25.66■■□□□ 1.7
SSNA1-204ENST00000464553 C9orf84Q5VXU9 1444 aa25.64■■□□□ 1.7
SSNA1-204ENST00000464553 MYT1LQ9UL68 1186 aa25.64■■□□□ 1.7
SSNA1-204ENST00000464553 APLP2Q06481 763 aa25.63■■□□□ 1.69
SSNA1-204ENST00000464553 LRRC9Q6ZRR7 1453 aa25.63■■□□□ 1.69
SSNA1-204ENST00000464553 ADAMTSL3P82987 1691 aa25.63■■□□□ 1.69
SSNA1-204ENST00000464553 HNRNPMP52272 730 aaKnown RBP eCLIP25.62■■□□□ 1.69
SSNA1-204ENST00000464553 BCORL1Q5H9F3 1711 aa25.62■■□□□ 1.69
SSNA1-204ENST00000464553 SAMD9LQ8IVG5 1584 aa25.61■■□□□ 1.69
SSNA1-204ENST00000464553 NCOA2Q15596 1464 aa25.61■■□□□ 1.69
SSNA1-204ENST00000464553 RSPH4AQ5TD94 716 aa25.61■■□□□ 1.69
SSNA1-204ENST00000464553 HECW2Q9P2P5 1572 aa25.61■■□□□ 1.69
SSNA1-204ENST00000464553 ITSN2Q9NZM3 1697 aa25.6■■□□□ 1.69
SSNA1-204ENST00000464553 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
SSNA1-204ENST00000464553 SPAG9O60271 1321 aaKnown RBP25.58■■□□□ 1.69
SSNA1-204ENST00000464553 REREQ9P2R6 1566 aa25.56■■□□□ 1.68
SSNA1-204ENST00000464553 PTPRMP28827 1452 aa25.56■■□□□ 1.68
SSNA1-204ENST00000464553 SYCP2Q9BX26 1530 aa25.55■■□□□ 1.68
SSNA1-204ENST00000464553 KANK4Q5T7N3 995 aaPredicted RBP25.54■■□□□ 1.68
SSNA1-204ENST00000464553 ZNF644Q9H582 1327 aaPredicted RBP25.53■■□□□ 1.68
SSNA1-204ENST00000464553 MBD5Q9P267 1494 aa25.52■■□□□ 1.68
SSNA1-204ENST00000464553 DIP2CQ9Y2E4 1556 aa25.52■■□□□ 1.68
SSNA1-204ENST00000464553 AGLP35573 1532 aa25.51■■□□□ 1.67
SSNA1-204ENST00000464553 RTEL1-TNFRSF6BF6WH68 1400 aa25.49■■□□□ 1.67
SSNA1-204ENST00000464553 KIDINS220Q9ULH0 1771 aa25.49■■□□□ 1.67
SSNA1-204ENST00000464553 MLECQ14165 292 aa25.48■■□□□ 1.67
SSNA1-204ENST00000464553 MADDQ8WXG6 1647 aa25.47■■□□□ 1.67
SSNA1-204ENST00000464553 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
SSNA1-204ENST00000464553 ABCA6Q8N139 1617 aa25.46■■□□□ 1.67
SSNA1-204ENST00000464553 SIGLEC1Q9BZZ2 1709 aa25.46■■□□□ 1.67
SSNA1-204ENST00000464553 ATP7AQ04656 1500 aa25.43■■□□□ 1.66
SSNA1-204ENST00000464553 MYOM3Q5VTT5 1437 aa25.43■■□□□ 1.66
SSNA1-204ENST00000464553 CAMSAP2Q08AD1 1489 aa25.41■■□□□ 1.66
SSNA1-204ENST00000464553 TSPY4P0CV99 314 aa25.41■■□□□ 1.66
SSNA1-204ENST00000464553 TSPY10P0CW01 314 aa25.41■■□□□ 1.66
SSNA1-204ENST00000464553 CCDC141Q6ZP82 1450 aa25.4■■□□□ 1.66
SSNA1-204ENST00000464553 INO80Q9ULG1 1556 aaPredicted RBP25.39■■□□□ 1.66
SSNA1-204ENST00000464553 PPP6R1Q9UPN7 881 aa25.39■■□□□ 1.66
SSNA1-204ENST00000464553 ESF1Q9H501 851 aaKnown RBP25.38■■□□□ 1.65
SSNA1-204ENST00000464553 RIMS1Q86UR5 1692 aaKnown RBP25.37■■□□□ 1.65
SSNA1-204ENST00000464553 ARHGEF5Q12774 1597 aa25.37■■□□□ 1.65
SSNA1-204ENST00000464553 A2MP01023 1474 aa25.37■■□□□ 1.65
SSNA1-204ENST00000464553 DHX29Q7Z478 1369 aaKnown RBP25.34■■□□□ 1.65
SSNA1-204ENST00000464553 CNTLNQ9NXG0 1405 aa25.34■■□□□ 1.65
SSNA1-204ENST00000464553 FER1L4A9Z1Z3 1794 aa25.33■■□□□ 1.65
SSNA1-204ENST00000464553 PLXNC1O60486 1568 aa25.31■■□□□ 1.64
SSNA1-204ENST00000464553 ADGBQ8N7X0 1667 aa25.29■■□□□ 1.64
SSNA1-204ENST00000464553 CEBPAP49715 358 aaPredicted RBP25.24■■□□□ 1.63
SSNA1-204ENST00000464553 MAST1Q9Y2H9 1570 aa25.23■■□□□ 1.63
SSNA1-204ENST00000464553 FGD6Q6ZV73 1430 aa25.23■■□□□ 1.63
SSNA1-204ENST00000464553 GGT6Q6P531 493 aa25.23■■□□□ 1.63
SSNA1-204ENST00000464553 LMTK3Q96Q04 1460 aa25.22■■□□□ 1.63
SSNA1-204ENST00000464553 PLPPR3Q6T4P5 718 aa25.22■■□□□ 1.63
SSNA1-204ENST00000464553 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
SSNA1-204ENST00000464553 ZMYM3Q14202 1370 aa25.2■■□□□ 1.63
SSNA1-204ENST00000464553 KIF3BO15066 747 aa25.2■■□□□ 1.62
SSNA1-204ENST00000464553 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
SSNA1-204ENST00000464553 PTPN23Q9H3S7 1636 aa25.18■■□□□ 1.62
SSNA1-204ENST00000464553 SHANK2Q9UPX8 1470 aa25.16■■□□□ 1.62
SSNA1-204ENST00000464553 NPATQ14207 1427 aa25.16■■□□□ 1.62
SSNA1-204ENST00000464553 MROH2AA6NES4 1674 aa25.16■■□□□ 1.62
SSNA1-204ENST00000464553 FAM135AQ9P2D6 1515 aa25.16■■□□□ 1.62
SSNA1-204ENST00000464553 ABCC5O15440 1437 aa25.15■■□□□ 1.62
SSNA1-204ENST00000464553 UHRF1BP1Q6BDS2 1440 aa25.12■■□□□ 1.61
SSNA1-204ENST00000464553 C3P01024 1663 aa25.12■■□□□ 1.61
SSNA1-204ENST00000464553 DAPK1P53355 1430 aa25.12■■□□□ 1.61
SSNA1-204ENST00000464553 PREX1Q8TCU6 1659 aa25.1■■□□□ 1.61
SSNA1-204ENST00000464553 WASHC2CQ9Y4E1 1318 aa25.09■■□□□ 1.61
SSNA1-204ENST00000464553 DUOX2Q9NRD8 1548 aa25.08■■□□□ 1.61
SSNA1-204ENST00000464553 DNMT1P26358 1616 aaKnown RBP25.08■■□□□ 1.6
SSNA1-204ENST00000464553 HSPA2P54652 639 aa25.07■■□□□ 1.6
SSNA1-204ENST00000464553 ANKRD30AQ9BXX3 1397 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms