RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 ITSN2Q9NZM3 1697 aa27.27■■□□□ 1.96
LST1-220ENST00000464526 SAMD9LQ8IVG5 1584 aa27.25■■□□□ 1.95
LST1-220ENST00000464526 MYOM3Q5VTT5 1437 aa27.25■■□□□ 1.95
LST1-220ENST00000464526 ZNF644Q9H582 1327 aaPredicted RBP27.24■■□□□ 1.95
LST1-220ENST00000464526 ARAP3Q8WWN8 1544 aa27.24■■□□□ 1.95
LST1-220ENST00000464526 COL17A1Q9UMD9 1497 aaPredicted RBP27.22■■□□□ 1.95
LST1-220ENST00000464526 TEX14Q8IWB6 1497 aa27.2■■□□□ 1.94
LST1-220ENST00000464526 ZNF777Q9ULD5 760 aaPredicted RBP27.2■■□□□ 1.94
LST1-220ENST00000464526 CFDP1Q9UEE9 299 aaPredicted RBP27.19■■□□□ 1.94
LST1-220ENST00000464526 ARHGEF12Q9NZN5 1544 aa27.18■■□□□ 1.94
LST1-220ENST00000464526 FGD6Q6ZV73 1430 aa27.17■■□□□ 1.94
LST1-220ENST00000464526 AKNAQ7Z591 1439 aa27.17■■□□□ 1.94
LST1-220ENST00000464526 ABCC1P33527 1531 aa27.17■■□□□ 1.94
LST1-220ENST00000464526 NEO1Q92859 1461 aa27.16■■□□□ 1.94
LST1-220ENST00000464526 CAMSAP2Q08AD1 1489 aa27.16■■□□□ 1.94
LST1-220ENST00000464526 CFAP74Q9C0B2 1584 aa27.15■■□□□ 1.94
LST1-220ENST00000464526 SYCP2Q9BX26 1530 aa27.15■■□□□ 1.94
LST1-220ENST00000464526 ADGRL1O94910 1474 aa27.15■■□□□ 1.94
LST1-220ENST00000464526 EFCAB2Q5VUJ9 269 aa27.14■■□□□ 1.94
LST1-220ENST00000464526 PTPN23Q9H3S7 1636 aa27.13■■□□□ 1.93
LST1-220ENST00000464526 FRMPD1Q5SYB0 1578 aa27.12■■□□□ 1.93
LST1-220ENST00000464526 MIA2Q96PC5 1412 aa27.09■■□□□ 1.93
LST1-220ENST00000464526 SCAPERQ9BY12 1400 aa27.09■■□□□ 1.93
LST1-220ENST00000464526 KDM6BO15054 1643 aa27.09■■□□□ 1.93
LST1-220ENST00000464526 TRAPPC8Q9Y2L5 1435 aa27.08■■□□□ 1.93
LST1-220ENST00000464526 RAPGEF3O95398 923 aa27.07■■□□□ 1.92
LST1-220ENST00000464526 RICTORQ6R327 1708 aa27.07■■□□□ 1.92
LST1-220ENST00000464526 HNRNPMP52272 730 aaKnown RBP eCLIP27.06■■□□□ 1.92
LST1-220ENST00000464526 TCOF1Q13428 1488 aaKnown RBP27.05■■□□□ 1.92
LST1-220ENST00000464526 MBD5Q9P267 1494 aa27.05■■□□□ 1.92
LST1-220ENST00000464526 POGZQ7Z3K3 1410 aa27.04■■□□□ 1.92
LST1-220ENST00000464526 RRBP1Q9P2E9 1410 aaKnown RBP27.02■■□□□ 1.92
LST1-220ENST00000464526 DENND4BO75064 1496 aaPredicted RBP27.01■■□□□ 1.91
LST1-220ENST00000464526 AFAP1Q8N556 730 aa27■■□□□ 1.91
LST1-220ENST00000464526 KIAA1107Q9UPP5 1409 aa26.99■■□□□ 1.91
LST1-220ENST00000464526 FAM50AQ14320 339 aaKnown RBP26.99■■□□□ 1.91
LST1-220ENST00000464526 PLEKHH2Q8IVE3 1493 aa26.96■■□□□ 1.91
LST1-220ENST00000464526 KDM5CP41229 1560 aa26.96■■□□□ 1.91
LST1-220ENST00000464526 ARHGEF5Q12774 1597 aa26.94■■□□□ 1.9
LST1-220ENST00000464526 DNMT1P26358 1616 aaKnown RBP26.94■■□□□ 1.9
LST1-220ENST00000464526 ZNF518AQ6AHZ1 1483 aa26.93■■□□□ 1.9
LST1-220ENST00000464526 ABCC5O15440 1437 aa26.93■■□□□ 1.9
LST1-220ENST00000464526 CCDC141Q6ZP82 1450 aa26.93■■□□□ 1.9
LST1-220ENST00000464526 PTPRKQ15262 1439 aa26.92■■□□□ 1.9
LST1-220ENST00000464526 CROCC2H7BZ55 1655 aa26.92■■□□□ 1.9
LST1-220ENST00000464526 DAPK1P53355 1430 aa26.9■■□□□ 1.9
LST1-220ENST00000464526 ZMYM4Q5VZL5 1548 aa26.9■■□□□ 1.9
LST1-220ENST00000464526 YEATS2Q9ULM3 1422 aa26.9■■□□□ 1.9
LST1-220ENST00000464526 ZFYVE16Q7Z3T8 1539 aa26.89■■□□□ 1.89
LST1-220ENST00000464526 INO80Q9ULG1 1556 aaPredicted RBP26.88■■□□□ 1.89
LST1-220ENST00000464526 KIDINS220Q9ULH0 1771 aa26.88■■□□□ 1.89
LST1-220ENST00000464526 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
LST1-220ENST00000464526 ITGAEP38570 1179 aa26.86■■□□□ 1.89
LST1-220ENST00000464526 ABCA6Q8N139 1617 aa26.85■■□□□ 1.89
LST1-220ENST00000464526 ATP7AQ04656 1500 aa26.83■■□□□ 1.89
LST1-220ENST00000464526 C9orf84Q5VXU9 1444 aa26.82■■□□□ 1.88
LST1-220ENST00000464526 SIGLEC1Q9BZZ2 1709 aa26.82■■□□□ 1.88
LST1-220ENST00000464526 CHIC2Q9UKJ5 165 aa26.81■■□□□ 1.88
LST1-220ENST00000464526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.81■■□□□ 1.88
LST1-220ENST00000464526 ARHGEF40Q8TER5 1519 aa26.81■■□□□ 1.88
LST1-220ENST00000464526 SPAG9O60271 1321 aaKnown RBP26.81■■□□□ 1.88
LST1-220ENST00000464526 MLH3Q9UHC1 1453 aa26.81■■□□□ 1.88
LST1-220ENST00000464526 DIP2CQ9Y2E4 1556 aa26.8■■□□□ 1.88
LST1-220ENST00000464526 MAST1Q9Y2H9 1570 aa26.79■■□□□ 1.88
LST1-220ENST00000464526 SHANK2Q9UPX8 1470 aa26.78■■□□□ 1.88
LST1-220ENST00000464526 ADGBQ8N7X0 1667 aa26.76■■□□□ 1.87
LST1-220ENST00000464526 MYT1LQ9UL68 1186 aa26.74■■□□□ 1.87
LST1-220ENST00000464526 MAGI2Q86UL8 1455 aa26.72■■□□□ 1.87
LST1-220ENST00000464526 TSPY4P0CV99 314 aa26.71■■□□□ 1.87
LST1-220ENST00000464526 TSPY10P0CW01 314 aa26.71■■□□□ 1.87
LST1-220ENST00000464526 RSPH4AQ5TD94 716 aa26.71■■□□□ 1.87
LST1-220ENST00000464526 PLXNC1O60486 1568 aa26.71■■□□□ 1.87
LST1-220ENST00000464526 RTEL1-TNFRSF6BF6WH68 1400 aa26.7■■□□□ 1.87
LST1-220ENST00000464526 ADGRL2O95490 1459 aa26.69■■□□□ 1.86
LST1-220ENST00000464526 NCOA1Q15788 1441 aa26.67■■□□□ 1.86
LST1-220ENST00000464526 RRP7BPQ9NSQ0 103 aa26.67■■□□□ 1.86
LST1-220ENST00000464526 KIF15Q9NS87 1388 aa26.65■■□□□ 1.86
LST1-220ENST00000464526 ATP10AO60312 1499 aa26.64■■□□□ 1.86
LST1-220ENST00000464526 A2MP01023 1474 aa26.62■■□□□ 1.85
LST1-220ENST00000464526 ANKRD30AQ9BXX3 1397 aa26.6■■□□□ 1.85
LST1-220ENST00000464526 REREQ9P2R6 1566 aa26.59■■□□□ 1.85
LST1-220ENST00000464526 ROCK1Q13464 1354 aa26.59■■□□□ 1.85
LST1-220ENST00000464526 NAIPQ13075 1403 aa26.56■■□□□ 1.84
LST1-220ENST00000464526 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
LST1-220ENST00000464526 GCC2Q8IWJ2 1684 aa26.55■■□□□ 1.84
LST1-220ENST00000464526 DHX29Q7Z478 1369 aaKnown RBP26.55■■□□□ 1.84
LST1-220ENST00000464526 TRIM26Q12899 539 aaPredicted RBP26.54■■□□□ 1.84
LST1-220ENST00000464526 HFM1A2PYH4 1435 aa26.52■■□□□ 1.84
LST1-220ENST00000464526 ANKRD50Q9ULJ7 1429 aa26.5■■□□□ 1.83
LST1-220ENST00000464526 AGLP35573 1532 aa26.49■■□□□ 1.83
LST1-220ENST00000464526 MROH1Q8NDA8 1641 aa26.49■■□□□ 1.83
LST1-220ENST00000464526 ERBINQ96RT1 1412 aa26.49■■□□□ 1.83
LST1-220ENST00000464526 MLECQ14165 292 aa26.48■■□□□ 1.83
LST1-220ENST00000464526 ARID4BQ4LE39 1312 aaPredicted RBP26.47■■□□□ 1.83
LST1-220ENST00000464526 EIF2AK4Q9P2K8 1649 aaKnown RBP26.47■■□□□ 1.83
LST1-220ENST00000464526 BCORL1Q5H9F3 1711 aa26.46■■□□□ 1.83
LST1-220ENST00000464526 KIF3BO15066 747 aa26.46■■□□□ 1.83
LST1-220ENST00000464526 RNF17Q9BXT8 1623 aaKnown RBP26.43■■□□□ 1.82
LST1-220ENST00000464526 DEPDC5O75140 1603 aa26.42■■□□□ 1.82
LST1-220ENST00000464526 PCGF6Q9BYE7 350 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms