RNA–Protein interactions for RNA: ENST00000464378.1

GDF9-203, Transcript of growth differentiation factor 9, humanhuman

TSL 2

Gene GDF9, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-203ENST00000464378 ST18O60284 1047 aa9.96□□□□□ -0.82
GDF9-203ENST00000464378 BBXQ8WY36 941 aaPredicted RBP9.96□□□□□ -0.82
GDF9-203ENST00000464378 RYDENQ9NUL5 291 aaKnown RBP9.95□□□□□ -0.82
GDF9-203ENST00000464378 C2orf72A6NCS6 295 aa9.93□□□□□ -0.82
GDF9-203ENST00000464378 SNPHO15079 494 aa9.92□□□□□ -0.82
GDF9-203ENST00000464378 POTEMA6NI47 508 aa9.89□□□□□ -0.83
GDF9-203ENST00000464378 POTEGQ6S5H5 508 aa9.89□□□□□ -0.83
GDF9-203ENST00000464378 CRISPLD2Q9H0B8 497 aa9.86□□□□□ -0.83
GDF9-203ENST00000464378 TMC2Q8TDI7 906 aa9.85□□□□□ -0.83
GDF9-203ENST00000464378 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
GDF9-203ENST00000464378 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
GDF9-203ENST00000464378 DOK7Q18PE1 504 aa9.84□□□□□ -0.83
GDF9-203ENST00000464378 CADPS2Q86UW7 1296 aa9.84□□□□□ -0.83
GDF9-203ENST00000464378 FOXK1P85037 733 aa9.83□□□□□ -0.84
GDF9-203ENST00000464378 DSG2Q14126 1118 aa9.82□□□□□ -0.84
GDF9-203ENST00000464378 MARVELD3Q96A59 401 aa9.82□□□□□ -0.84
GDF9-203ENST00000464378 CCDC180Q9P1Z9 1646 aa9.82□□□□□ -0.84
GDF9-203ENST00000464378 RB1CC1Q8TDY2 1594 aa9.81□□□□□ -0.84
GDF9-203ENST00000464378 HOXB1P14653 301 aaPredicted RBP9.81□□□□□ -0.84
GDF9-203ENST00000464378 GPR153Q6NV75 609 aa9.81□□□□□ -0.84
GDF9-203ENST00000464378 SPRYD3Q8NCJ5 442 aa9.81□□□□□ -0.84
GDF9-203ENST00000464378 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.8□□□□□ -0.84
GDF9-203ENST00000464378 SLC34A2O95436 690 aa9.79□□□□□ -0.84
GDF9-203ENST00000464378 PAXIP1Q6ZW49 1069 aaPredicted RBP9.79□□□□□ -0.84
GDF9-203ENST00000464378 POTEB3A0JP26 581 aa9.78□□□□□ -0.84
GDF9-203ENST00000464378 POTEBQ6S5H4 581 aa9.78□□□□□ -0.84
GDF9-203ENST00000464378 PLPP6Q8IY26 295 aa9.78□□□□□ -0.84
GDF9-203ENST00000464378 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
GDF9-203ENST00000464378 ZSWIM6Q9HCJ5 1215 aa9.78□□□□□ -0.84
GDF9-203ENST00000464378 KHSRPQ92945 711 aaKnown RBP eCLIP9.76□□□□□ -0.85
GDF9-203ENST00000464378 CFAP44Q96MT7 982 aa9.76□□□□□ -0.85
GDF9-203ENST00000464378 RIMBP2O15034 1052 aa9.75□□□□□ -0.85
GDF9-203ENST00000464378 PDE4AP27815 886 aa9.75□□□□□ -0.85
GDF9-203ENST00000464378 MFSD10Q14728 455 aa9.75□□□□□ -0.85
GDF9-203ENST00000464378 ARSIQ5FYB1 569 aa9.75□□□□□ -0.85
GDF9-203ENST00000464378 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
GDF9-203ENST00000464378 EMP3P54852 163 aa9.74□□□□□ -0.85
GDF9-203ENST00000464378 PPP1R15BQ5SWA1 713 aa9.73□□□□□ -0.85
GDF9-203ENST00000464378 PTCD2Q8WV60 388 aaKnown RBP9.72□□□□□ -0.85
GDF9-203ENST00000464378 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
GDF9-203ENST00000464378 PCDHGA4Q9Y5G9 962 aa9.72□□□□□ -0.85
GDF9-203ENST00000464378 KDM4FA0A1W2PPD8 638 aa9.71□□□□□ -0.86
GDF9-203ENST00000464378 FAM205CA6NFA0 338 aa9.7□□□□□ -0.86
GDF9-203ENST00000464378 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
GDF9-203ENST00000464378 DDX27Q96GQ7 796 aaKnown RBP9.69□□□□□ -0.86
GDF9-203ENST00000464378 CDAN1Q8IWY9 1227 aa9.68□□□□□ -0.86
GDF9-203ENST00000464378 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
GDF9-203ENST00000464378 NUDT7P0C024 238 aa9.67□□□□□ -0.86
GDF9-203ENST00000464378 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
GDF9-203ENST00000464378 CUX2O14529 1486 aa9.66□□□□□ -0.86
GDF9-203ENST00000464378 EMILIN3Q9NT22 766 aa9.65□□□□□ -0.86
GDF9-203ENST00000464378 ERBB3P21860 1342 aa9.64□□□□□ -0.87
GDF9-203ENST00000464378 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
GDF9-203ENST00000464378 VARS2Q5ST30 1063 aaKnown RBP9.64□□□□□ -0.87
GDF9-203ENST00000464378 CAMK2BQ13554 666 aa9.63□□□□□ -0.87
GDF9-203ENST00000464378 TSHZ2Q9NRE2 1034 aa9.63□□□□□ -0.87
GDF9-203ENST00000464378 UPF1Q92900 1129 aaKnown RBP eCLIP9.62□□□□□ -0.87
GDF9-203ENST00000464378 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
GDF9-203ENST00000464378 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
GDF9-203ENST00000464378 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
GDF9-203ENST00000464378 CC2D2AQ9P2K1 1620 aa9.6□□□□□ -0.87
GDF9-203ENST00000464378 PLCB2Q00722 1185 aa9.59□□□□□ -0.87
GDF9-203ENST00000464378 TBC1D12O60347 775 aa9.57□□□□□ -0.88
GDF9-203ENST00000464378 ZNF687Q8N1G0 1237 aa9.57□□□□□ -0.88
GDF9-203ENST00000464378 ANO8Q9HCE9 1232 aaPredicted RBP9.56□□□□□ -0.88
GDF9-203ENST00000464378 POTEEQ6S8J3 1075 aa9.55□□□□□ -0.88
GDF9-203ENST00000464378 UNC13AQ9UPW8 1703 aa9.55□□□□□ -0.88
GDF9-203ENST00000464378 EVI5O60447 810 aa9.52□□□□□ -0.89
GDF9-203ENST00000464378 MAP3K9P80192 1104 aa9.51□□□□□ -0.89
GDF9-203ENST00000464378 DPYSL4O14531 572 aa9.5□□□□□ -0.89
GDF9-203ENST00000464378 E2F4Q16254 413 aa9.49□□□□□ -0.89
GDF9-203ENST00000464378 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
GDF9-203ENST00000464378 FOSBP53539 338 aa9.48□□□□□ -0.89
GDF9-203ENST00000464378 ARIH1Q9Y4X5 557 aaPredicted RBP9.48□□□□□ -0.89
GDF9-203ENST00000464378 NACADO15069 1562 aa9.48□□□□□ -0.89
GDF9-203ENST00000464378 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
GDF9-203ENST00000464378 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
GDF9-203ENST00000464378 AXIN2Q9Y2T1 843 aa9.46□□□□□ -0.9
GDF9-203ENST00000464378 PPP4R3BQ5MIZ7 849 aa9.45□□□□□ -0.9
GDF9-203ENST00000464378 JPH4Q96JJ6 628 aa9.45□□□□□ -0.9
GDF9-203ENST00000464378 PBX2P40425 430 aa9.44□□□□□ -0.9
GDF9-203ENST00000464378 PDIA6Q15084 440 aa9.44□□□□□ -0.9
GDF9-203ENST00000464378 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
GDF9-203ENST00000464378 BICRAQ9NZM4 1560 aa9.43□□□□□ -0.9
GDF9-203ENST00000464378 PCDHGA10Q9Y5H3 936 aa9.43□□□□□ -0.9
GDF9-203ENST00000464378 PTGER2P43116 358 aa9.42□□□□□ -0.9
GDF9-203ENST00000464378 ARHGAP33O14559 1287 aa9.41□□□□□ -0.9
GDF9-203ENST00000464378 PSEN2P49810 448 aa9.41□□□□□ -0.9
GDF9-203ENST00000464378 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
GDF9-203ENST00000464378 KCNV2Q8TDN2 545 aa9.41□□□□□ -0.9
GDF9-203ENST00000464378 BCL2L12Q9HB09 334 aa9.41□□□□□ -0.9
GDF9-203ENST00000464378 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
GDF9-203ENST00000464378 ADAM33Q9BZ11 813 aa9.4□□□□□ -0.9
GDF9-203ENST00000464378 HAP1P54257 671 aaPredicted RBP9.39□□□□□ -0.91
GDF9-203ENST00000464378 MMRN1Q13201 1228 aa9.39□□□□□ -0.91
GDF9-203ENST00000464378 KDM2AQ9Y2K7 1162 aa9.39□□□□□ -0.91
GDF9-203ENST00000464378 SPDYE16A6NNV3 312 aaPredicted RBP9.38□□□□□ -0.91
GDF9-203ENST00000464378 PHF14O94880 888 aa9.38□□□□□ -0.91
GDF9-203ENST00000464378 ZDHHC16Q969W1 377 aa9.38□□□□□ -0.91
GDF9-203ENST00000464378 ERCC6Q03468 1493 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms