RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
CLSTN1-204ENST00000464286 FAM163AQ96GL9 167 aaPredicted RBP10.69□□□□□ -0.7
CLSTN1-204ENST00000464286 TAOK2Q9UL54 1235 aa10.69□□□□□ -0.7
CLSTN1-204ENST00000464286 SOX12O15370 315 aa10.68□□□□□ -0.7
CLSTN1-204ENST00000464286 ZNF316A6NFI3 1004 aaPredicted RBP10.67□□□□□ -0.7
CLSTN1-204ENST00000464286 BCL11BQ9C0K0 894 aaPredicted RBP10.67□□□□□ -0.7
CLSTN1-204ENST00000464286 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
CLSTN1-204ENST00000464286 TNIKQ9UKE5 1360 aa10.65□□□□□ -0.7
CLSTN1-204ENST00000464286 BOLA1Q9Y3E2 137 aa10.65□□□□□ -0.7
CLSTN1-204ENST00000464286 MROH2BQ7Z745 1585 aa10.65□□□□□ -0.71
CLSTN1-204ENST00000464286 TTBK1Q5TCY1 1321 aaPredicted RBP10.64□□□□□ -0.71
CLSTN1-204ENST00000464286 POTEMA6NI47 508 aa10.64□□□□□ -0.71
CLSTN1-204ENST00000464286 C3orf67Q6ZVT6 689 aa10.64□□□□□ -0.71
CLSTN1-204ENST00000464286 PHF8Q9UPP1 1060 aa10.64□□□□□ -0.71
CLSTN1-204ENST00000464286 STK24Q9Y6E0 443 aa10.64□□□□□ -0.71
CLSTN1-204ENST00000464286 MS4A4AQ96JQ5 239 aa10.63□□□□□ -0.71
CLSTN1-204ENST00000464286 STK25O00506 426 aa10.62□□□□□ -0.71
CLSTN1-204ENST00000464286 POTEGQ6S5H5 508 aa10.62□□□□□ -0.71
CLSTN1-204ENST00000464286 WIZO95785 1651 aa10.62□□□□□ -0.71
CLSTN1-204ENST00000464286 TOP2AP11388 1531 aaKnown RBP10.62□□□□□ -0.71
CLSTN1-204ENST00000464286 CEP162Q5TB80 1403 aa10.61□□□□□ -0.71
CLSTN1-204ENST00000464286 TMEM121BQ9BXQ6 578 aaPredicted RBP10.61□□□□□ -0.71
CLSTN1-204ENST00000464286 G3V3G9 751 aa10.6□□□□□ -0.71
CLSTN1-204ENST00000464286 FBXO22Q8NEZ5 403 aa10.58□□□□□ -0.72
CLSTN1-204ENST00000464286 GOLGA3Q08378 1498 aa10.57□□□□□ -0.72
CLSTN1-204ENST00000464286 CECR2Q9BXF3 1484 aa10.57□□□□□ -0.72
CLSTN1-204ENST00000464286 ST18O60284 1047 aa10.57□□□□□ -0.72
CLSTN1-204ENST00000464286 NLRP6P59044 892 aa10.56□□□□□ -0.72
CLSTN1-204ENST00000464286 MFRPQ9BY79 579 aa10.56□□□□□ -0.72
CLSTN1-204ENST00000464286 MICALL2Q8IY33 904 aa10.55□□□□□ -0.72
CLSTN1-204ENST00000464286 SNPHO15079 494 aa10.54□□□□□ -0.72
CLSTN1-204ENST00000464286 KIF21BO75037 1637 aa10.51□□□□□ -0.73
CLSTN1-204ENST00000464286 TMEM92Q6UXU6 159 aa10.5□□□□□ -0.73
CLSTN1-204ENST00000464286 CEP164Q9UPV0 1460 aa10.49□□□□□ -0.73
CLSTN1-204ENST00000464286 SMARCA2P51531 1590 aa10.49□□□□□ -0.73
CLSTN1-204ENST00000464286 SMARCA4P51532 1647 aa10.49□□□□□ -0.73
CLSTN1-204ENST00000464286 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
CLSTN1-204ENST00000464286 HS6ST3Q8IZP7 471 aa10.47□□□□□ -0.73
CLSTN1-204ENST00000464286 CCDC88BA6NC98 1476 aa10.45□□□□□ -0.74
CLSTN1-204ENST00000464286 UBTFP17480 764 aaKnown RBP10.45□□□□□ -0.74
CLSTN1-204ENST00000464286 PCDH10Q9P2E7 1040 aa10.45□□□□□ -0.74
CLSTN1-204ENST00000464286 HOXB3P14651 431 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-204ENST00000464286 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-204ENST00000464286 ABCC8Q09428 1581 aa10.42□□□□□ -0.74
CLSTN1-204ENST00000464286 VPS8Q8N3P4 1428 aa10.41□□□□□ -0.74
CLSTN1-204ENST00000464286 PPP1R37O75864 691 aa10.41□□□□□ -0.74
CLSTN1-204ENST00000464286 MARVELD3Q96A59 401 aa10.41□□□□□ -0.74
CLSTN1-204ENST00000464286 YTHDC1Q96MU7 727 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-204ENST00000464286 CLIP1P30622 1438 aa10.39□□□□□ -0.75
CLSTN1-204ENST00000464286 CDAN1Q8IWY9 1227 aa10.38□□□□□ -0.75
CLSTN1-204ENST00000464286 SOGA1O94964 1423 aa10.38□□□□□ -0.75
CLSTN1-204ENST00000464286 NKX1-1Q15270 411 aaPredicted RBP10.37□□□□□ -0.75
CLSTN1-204ENST00000464286 DOK7Q18PE1 504 aa10.36□□□□□ -0.75
CLSTN1-204ENST00000464286 PEG3Q9GZU2 1588 aa10.35□□□□□ -0.75
CLSTN1-204ENST00000464286 KIF3CO14782 793 aa10.34□□□□□ -0.75
CLSTN1-204ENST00000464286 PLSCR2Q9NRY7 297 aa10.34□□□□□ -0.75
CLSTN1-204ENST00000464286 HOXB1P14653 301 aaPredicted RBP10.33□□□□□ -0.76
CLSTN1-204ENST00000464286 EMP3P54852 163 aa10.33□□□□□ -0.76
CLSTN1-204ENST00000464286 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
CLSTN1-204ENST00000464286 C2orf72A6NCS6 295 aa10.32□□□□□ -0.76
CLSTN1-204ENST00000464286 POTEB3A0JP26 581 aa10.31□□□□□ -0.76
CLSTN1-204ENST00000464286 POTEBQ6S5H4 581 aa10.31□□□□□ -0.76
CLSTN1-204ENST00000464286 ERICH3Q5RHP9 1530 aa10.31□□□□□ -0.76
CLSTN1-204ENST00000464286 FAM205CA6NFA0 338 aa10.29□□□□□ -0.76
CLSTN1-204ENST00000464286 RIMBP2O15034 1052 aa10.29□□□□□ -0.76
CLSTN1-204ENST00000464286 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
CLSTN1-204ENST00000464286 ANP32EQ9BTT0 268 aa10.28□□□□□ -0.76
CLSTN1-204ENST00000464286 ZSWIM6Q9HCJ5 1215 aa10.28□□□□□ -0.76
CLSTN1-204ENST00000464286 SUPT16HQ9Y5B9 1047 aaKnown RBP10.28□□□□□ -0.76
CLSTN1-204ENST00000464286 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
CLSTN1-204ENST00000464286 CUX2O14529 1486 aa10.26□□□□□ -0.77
CLSTN1-204ENST00000464286 UNC13AQ9UPW8 1703 aa10.25□□□□□ -0.77
CLSTN1-204ENST00000464286 TMC2Q8TDI7 906 aa10.25□□□□□ -0.77
CLSTN1-204ENST00000464286 RUSC2Q8N2Y8 1516 aa10.24□□□□□ -0.77
CLSTN1-204ENST00000464286 DHX57Q6P158 1386 aaKnown RBP10.24□□□□□ -0.77
CLSTN1-204ENST00000464286 SYNJ1O43426 1573 aa10.23□□□□□ -0.77
CLSTN1-204ENST00000464286 RYDENQ9NUL5 291 aaKnown RBP10.23□□□□□ -0.77
CLSTN1-204ENST00000464286 GTPBP6O43824 516 aaPredicted RBP10.22□□□□□ -0.77
CLSTN1-204ENST00000464286 NEFLP07196 543 aa10.22□□□□□ -0.77
CLSTN1-204ENST00000464286 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
CLSTN1-204ENST00000464286 RRBP1Q9P2E9 1410 aaKnown RBP10.22□□□□□ -0.77
CLSTN1-204ENST00000464286 TOP2BQ02880 1626 aa10.22□□□□□ -0.77
CLSTN1-204ENST00000464286 TIMELESSQ9UNS1 1208 aa10.21□□□□□ -0.77
CLSTN1-204ENST00000464286 ERBB3P21860 1342 aa10.21□□□□□ -0.78
CLSTN1-204ENST00000464286 KHSRPQ92945 711 aaKnown RBP eCLIP10.2□□□□□ -0.78
CLSTN1-204ENST00000464286 BIVM-ERCC5R4GMW8 1640 aa10.2□□□□□ -0.78
CLSTN1-204ENST00000464286 MYT1LQ9UL68 1186 aa10.19□□□□□ -0.78
CLSTN1-204ENST00000464286 MAP3K1Q13233 1512 aa10.18□□□□□ -0.78
CLSTN1-204ENST00000464286 SLC34A2O95436 690 aa10.18□□□□□ -0.78
CLSTN1-204ENST00000464286 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
CLSTN1-204ENST00000464286 KRTAP3-3Q9BYR6 98 aa10.18□□□□□ -0.78
CLSTN1-204ENST00000464286 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
CLSTN1-204ENST00000464286 GPHNQ9NQX3 736 aaPredicted RBP10.18□□□□□ -0.78
CLSTN1-204ENST00000464286 TSHZ2Q9NRE2 1034 aa10.17□□□□□ -0.78
CLSTN1-204ENST00000464286 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
CLSTN1-204ENST00000464286 FOXK1P85037 733 aa10.16□□□□□ -0.78
CLSTN1-204ENST00000464286 VARS2Q5ST30 1063 aaKnown RBP10.16□□□□□ -0.78
CLSTN1-204ENST00000464286 RTN4Q9NQC3 1192 aaKnown RBP10.15□□□□□ -0.78
CLSTN1-204ENST00000464286 DSG2Q14126 1118 aa10.14□□□□□ -0.79
CLSTN1-204ENST00000464286 PLPP6Q8IY26 295 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms