RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 CFAP74Q9C0B2 1584 aa39.84■■■■□ 3.97
PAXBP1-206ENST00000464256 ARAP3Q8WWN8 1544 aa39.84■■■■□ 3.97
PAXBP1-206ENST00000464256 APLP2Q06481 763 aa39.83■■■■□ 3.97
PAXBP1-206ENST00000464256 AKNAQ7Z591 1439 aa39.82■■■■□ 3.97
PAXBP1-206ENST00000464256 CCNB3Q8WWL7 1395 aa39.77■■■■□ 3.96
PAXBP1-206ENST00000464256 FRMPD1Q5SYB0 1578 aa39.74■■■■□ 3.95
PAXBP1-206ENST00000464256 EFCAB2Q5VUJ9 269 aa39.73■■■■□ 3.95
PAXBP1-206ENST00000464256 ITSN2Q9NZM3 1697 aa39.72■■■■□ 3.95
PAXBP1-206ENST00000464256 ADGRL1O94910 1474 aa39.72■■■■□ 3.95
PAXBP1-206ENST00000464256 RAPGEF3O95398 923 aa39.72■■■■□ 3.95
PAXBP1-206ENST00000464256 RICTORQ6R327 1708 aa39.71■■■■□ 3.95
PAXBP1-206ENST00000464256 PHLDB1Q86UU1 1377 aa39.7■■■■□ 3.95
PAXBP1-206ENST00000464256 SAMD9LQ8IVG5 1584 aa39.7■■■■□ 3.95
PAXBP1-206ENST00000464256 SCAPERQ9BY12 1400 aa39.66■■■■□ 3.94
PAXBP1-206ENST00000464256 ZNF777Q9ULD5 760 aaPredicted RBP39.66■■■■□ 3.94
PAXBP1-206ENST00000464256 PPARGC1BQ86YN6 1023 aaKnown RBP39.65■■■■□ 3.94
PAXBP1-206ENST00000464256 ARHGEF12Q9NZN5 1544 aa39.64■■■■□ 3.94
PAXBP1-206ENST00000464256 ABCC1P33527 1531 aa39.64■■■■□ 3.94
PAXBP1-206ENST00000464256 CFDP1Q9UEE9 299 aaPredicted RBP39.64■■■■□ 3.94
PAXBP1-206ENST00000464256 DENND4BO75064 1496 aaPredicted RBP39.63■■■■□ 3.93
PAXBP1-206ENST00000464256 ZNF644Q9H582 1327 aaPredicted RBP39.6■■■■□ 3.93
PAXBP1-206ENST00000464256 SYCP2Q9BX26 1530 aa39.56■■■■□ 3.92
PAXBP1-206ENST00000464256 POGZQ7Z3K3 1410 aa39.56■■■■□ 3.92
PAXBP1-206ENST00000464256 MYOM3Q5VTT5 1437 aa39.52■■■■□ 3.92
PAXBP1-206ENST00000464256 TRAPPC8Q9Y2L5 1435 aa39.52■■■■□ 3.92
PAXBP1-206ENST00000464256 AFAP1Q8N556 730 aa39.48■■■■□ 3.91
PAXBP1-206ENST00000464256 HNRNPMP52272 730 aaKnown RBP eCLIP39.48■■■■□ 3.91
PAXBP1-206ENST00000464256 CAMSAP2Q08AD1 1489 aa39.47■■■■□ 3.91
PAXBP1-206ENST00000464256 ZMYM4Q5VZL5 1548 aa39.46■■■■□ 3.91
PAXBP1-206ENST00000464256 KDM5CP41229 1560 aa39.44■■■■□ 3.9
PAXBP1-206ENST00000464256 ZNF518AQ6AHZ1 1483 aa39.43■■■■□ 3.9
PAXBP1-206ENST00000464256 YEATS2Q9ULM3 1422 aa39.39■■■■□ 3.9
PAXBP1-206ENST00000464256 KIAA1107Q9UPP5 1409 aa39.39■■■■□ 3.9
PAXBP1-206ENST00000464256 PLEKHH2Q8IVE3 1493 aa39.38■■■■□ 3.89
PAXBP1-206ENST00000464256 MBD5Q9P267 1494 aa39.38■■■■□ 3.89
PAXBP1-206ENST00000464256 MIA2Q96PC5 1412 aa39.36■■■■□ 3.89
PAXBP1-206ENST00000464256 PTPN23Q9H3S7 1636 aa39.36■■■■□ 3.89
PAXBP1-206ENST00000464256 ARHGEF40Q8TER5 1519 aa39.35■■■■□ 3.89
PAXBP1-206ENST00000464256 FGD6Q6ZV73 1430 aa39.35■■■■□ 3.89
PAXBP1-206ENST00000464256 HECW2Q9P2P5 1572 aa39.34■■■■□ 3.89
PAXBP1-206ENST00000464256 ZFYVE16Q7Z3T8 1539 aa39.32■■■■□ 3.89
PAXBP1-206ENST00000464256 KIDINS220Q9ULH0 1771 aa39.31■■■■□ 3.88
PAXBP1-206ENST00000464256 SIGLEC1Q9BZZ2 1709 aa39.3■■■■□ 3.88
PAXBP1-206ENST00000464256 ABCA6Q8N139 1617 aa39.27■■■■□ 3.88
PAXBP1-206ENST00000464256 MAGI2Q86UL8 1455 aa39.26■■■■□ 3.87
PAXBP1-206ENST00000464256 MLH3Q9UHC1 1453 aa39.24■■■■□ 3.87
PAXBP1-206ENST00000464256 ARHGEF5Q12774 1597 aa39.23■■■■□ 3.87
PAXBP1-206ENST00000464256 INO80Q9ULG1 1556 aaPredicted RBP39.23■■■■□ 3.87
PAXBP1-206ENST00000464256 DIP2CQ9Y2E4 1556 aa39.22■■■■□ 3.87
PAXBP1-206ENST00000464256 MYT1LQ9UL68 1186 aa39.22■■■■□ 3.87
PAXBP1-206ENST00000464256 TCOF1Q13428 1488 aaKnown RBP39.22■■■■□ 3.87
PAXBP1-206ENST00000464256 CCDC141Q6ZP82 1450 aa39.22■■■■□ 3.87
PAXBP1-206ENST00000464256 ATP7AQ04656 1500 aa39.19■■■■□ 3.86
PAXBP1-206ENST00000464256 SPAG9O60271 1321 aaKnown RBP39.18■■■■□ 3.86
PAXBP1-206ENST00000464256 CROCC2H7BZ55 1655 aa39.12■■■■□ 3.85
PAXBP1-206ENST00000464256 ATP10AO60312 1499 aa39.1■■■■□ 3.85
PAXBP1-206ENST00000464256 DNMT1P26358 1616 aaKnown RBP39.1■■■■□ 3.85
PAXBP1-206ENST00000464256 FAM50AQ14320 339 aaKnown RBP39.09■■■■□ 3.85
PAXBP1-206ENST00000464256 ABCC5O15440 1437 aa39.07■■■■□ 3.85
PAXBP1-206ENST00000464256 C9orf84Q5VXU9 1444 aa39.06■■■■□ 3.84
PAXBP1-206ENST00000464256 ADGBQ8N7X0 1667 aa39.06■■■■□ 3.84
PAXBP1-206ENST00000464256 DAPK1P53355 1430 aa39.04■■■■□ 3.84
PAXBP1-206ENST00000464256 RSPH4AQ5TD94 716 aa39.03■■■■□ 3.84
PAXBP1-206ENST00000464256 MAST1Q9Y2H9 1570 aa39.02■■■■□ 3.84
PAXBP1-206ENST00000464256 RTEL1-TNFRSF6BF6WH68 1400 aa39■■■■□ 3.83
PAXBP1-206ENST00000464256 ARID4BQ4LE39 1312 aaPredicted RBP39■■■■□ 3.83
PAXBP1-206ENST00000464256 KDM4FA0A1W2PPD8 638 aa39■■■■□ 3.83
PAXBP1-206ENST00000464256 BCORL1Q5H9F3 1711 aa38.98■■■■□ 3.83
PAXBP1-206ENST00000464256 REREQ9P2R6 1566 aa38.98■■■■□ 3.83
PAXBP1-206ENST00000464256 TSPY4P0CV99 314 aa38.97■■■■□ 3.83
PAXBP1-206ENST00000464256 TSPY10P0CW01 314 aa38.97■■■■□ 3.83
PAXBP1-206ENST00000464256 RRBP1Q9P2E9 1410 aaKnown RBP38.94■■■■□ 3.82
PAXBP1-206ENST00000464256 PLXNC1O60486 1568 aa38.94■■■■□ 3.82
PAXBP1-206ENST00000464256 SHANK2Q9UPX8 1470 aa38.93■■■■□ 3.82
PAXBP1-206ENST00000464256 A2MP01023 1474 aa38.91■■■■□ 3.82
PAXBP1-206ENST00000464256 CHIC2Q9UKJ5 165 aa38.91■■■■□ 3.82
PAXBP1-206ENST00000464256 PTPRKQ15262 1439 aa38.91■■■■□ 3.82
PAXBP1-206ENST00000464256 MLECQ14165 292 aa38.9■■■■□ 3.82
PAXBP1-206ENST00000464256 ADAMTSL3P82987 1691 aa38.89■■■■□ 3.82
PAXBP1-206ENST00000464256 MADDQ8WXG6 1647 aa38.85■■■■□ 3.81
PAXBP1-206ENST00000464256 AGLP35573 1532 aa38.85■■■■□ 3.81
PAXBP1-206ENST00000464256 ITGAEP38570 1179 aa38.84■■■■□ 3.81
PAXBP1-206ENST00000464256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.8■■■■□ 3.8
PAXBP1-206ENST00000464256 DHX29Q7Z478 1369 aaKnown RBP38.79■■■■□ 3.8
PAXBP1-206ENST00000464256 RRP7BPQ9NSQ0 103 aa38.78■■■■□ 3.8
PAXBP1-206ENST00000464256 FER1L4A9Z1Z3 1794 aa38.77■■■■□ 3.8
PAXBP1-206ENST00000464256 KIF15Q9NS87 1388 aa38.76■■■■□ 3.79
PAXBP1-206ENST00000464256 RIMS1Q86UR5 1692 aaKnown RBP38.76■■■■□ 3.79
PAXBP1-206ENST00000464256 ADGRL2O95490 1459 aa38.74■■■■□ 3.79
PAXBP1-206ENST00000464256 NCOA1Q15788 1441 aa38.74■■■■□ 3.79
PAXBP1-206ENST00000464256 DUOX2Q9NRD8 1548 aa38.7■■■■□ 3.79
PAXBP1-206ENST00000464256 ANKRD30AQ9BXX3 1397 aa38.69■■■■□ 3.78
PAXBP1-206ENST00000464256 KIF3BO15066 747 aa38.65■■■■□ 3.78
PAXBP1-206ENST00000464256 GGT6Q6P531 493 aa38.64■■■■□ 3.78
PAXBP1-206ENST00000464256 EIF2AK4Q9P2K8 1649 aaKnown RBP38.62■■■■□ 3.77
PAXBP1-206ENST00000464256 PTPRMP28827 1452 aa38.6■■■■□ 3.77
PAXBP1-206ENST00000464256 CLTCQ00610 1675 aaKnown RBP38.58■■■■□ 3.77
PAXBP1-206ENST00000464256 RNF17Q9BXT8 1623 aaKnown RBP38.58■■■■□ 3.77
PAXBP1-206ENST00000464256 MROH1Q8NDA8 1641 aa38.57■■■■□ 3.76
PAXBP1-206ENST00000464256 ERBINQ96RT1 1412 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 212.8 ms