RNA–Protein interactions for RNA: ENST00000464243.1

CLHC1-210, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 509 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-210ENST00000464243 EMP3P54852 163 aa13.7□□□□□ -0.22
CLHC1-210ENST00000464243 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
CLHC1-210ENST00000464243 ZNF710Q8N1W2 664 aa13.68□□□□□ -0.22
CLHC1-210ENST00000464243 KIF3CO14782 793 aa13.67□□□□□ -0.22
CLHC1-210ENST00000464243 HOXB1P14653 301 aaPredicted RBP13.66□□□□□ -0.22
CLHC1-210ENST00000464243 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
CLHC1-210ENST00000464243 POTEB3A0JP26 581 aa13.63□□□□□ -0.23
CLHC1-210ENST00000464243 RIMBP2O15034 1052 aa13.63□□□□□ -0.23
CLHC1-210ENST00000464243 POTEBQ6S5H4 581 aa13.63□□□□□ -0.23
CLHC1-210ENST00000464243 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
CLHC1-210ENST00000464243 HS3ST6Q96QI5 342 aa13.6□□□□□ -0.23
CLHC1-210ENST00000464243 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
CLHC1-210ENST00000464243 GPR153Q6NV75 609 aa13.58□□□□□ -0.24
CLHC1-210ENST00000464243 TMC2Q8TDI7 906 aa13.57□□□□□ -0.24
CLHC1-210ENST00000464243 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
CLHC1-210ENST00000464243 RYDENQ9NUL5 291 aaKnown RBP13.53□□□□□ -0.24
CLHC1-210ENST00000464243 ARSIQ5FYB1 569 aa13.52□□□□□ -0.25
CLHC1-210ENST00000464243 ERBB3P21860 1342 aa13.51□□□□□ -0.25
CLHC1-210ENST00000464243 GTPBP6O43824 516 aaPredicted RBP13.49□□□□□ -0.25
CLHC1-210ENST00000464243 KHSRPQ92945 711 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLHC1-210ENST00000464243 KRTAP3-3Q9BYR6 98 aa13.48□□□□□ -0.25
CLHC1-210ENST00000464243 KRTAP3-2Q9BYR7 98 aa13.48□□□□□ -0.25
CLHC1-210ENST00000464243 SLC34A2O95436 690 aa13.47□□□□□ -0.25
CLHC1-210ENST00000464243 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
CLHC1-210ENST00000464243 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
CLHC1-210ENST00000464243 FOXK1P85037 733 aa13.43□□□□□ -0.26
CLHC1-210ENST00000464243 PCDHGA4Q9Y5G9 962 aa13.42□□□□□ -0.26
CLHC1-210ENST00000464243 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
CLHC1-210ENST00000464243 SPNS2Q8IVW8 549 aa13.41□□□□□ -0.26
CLHC1-210ENST00000464243 DSG2Q14126 1118 aa13.4□□□□□ -0.26
CLHC1-210ENST00000464243 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
CLHC1-210ENST00000464243 ZNF316A6NFI3 1004 aaPredicted RBP13.38□□□□□ -0.27
CLHC1-210ENST00000464243 NUDT7P0C024 238 aa13.38□□□□□ -0.27
CLHC1-210ENST00000464243 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
CLHC1-210ENST00000464243 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
CLHC1-210ENST00000464243 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
CLHC1-210ENST00000464243 PTCD2Q8WV60 388 aaKnown RBP13.35□□□□□ -0.27
CLHC1-210ENST00000464243 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
CLHC1-210ENST00000464243 MMRN1Q13201 1228 aa13.33□□□□□ -0.28
CLHC1-210ENST00000464243 LHX6Q9UPM6 363 aa13.31□□□□□ -0.28
CLHC1-210ENST00000464243 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
CLHC1-210ENST00000464243 PDE4AP27815 886 aa13.28□□□□□ -0.28
CLHC1-210ENST00000464243 BBXQ8WY36 941 aaPredicted RBP13.28□□□□□ -0.28
CLHC1-210ENST00000464243 PPP1R15BQ5SWA1 713 aa13.27□□□□□ -0.29
CLHC1-210ENST00000464243 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
CLHC1-210ENST00000464243 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
CLHC1-210ENST00000464243 TBC1D12O60347 775 aa13.22□□□□□ -0.29
CLHC1-210ENST00000464243 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
CLHC1-210ENST00000464243 MFSD10Q14728 455 aa13.2□□□□□ -0.3
CLHC1-210ENST00000464243 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLHC1-210ENST00000464243 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
CLHC1-210ENST00000464243 POTEEQ6S8J3 1075 aa13.18□□□□□ -0.3
CLHC1-210ENST00000464243 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
CLHC1-210ENST00000464243 PBX2P40425 430 aa13.16□□□□□ -0.3
CLHC1-210ENST00000464243 LSM11P83369 360 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLHC1-210ENST00000464243 AXIN2Q9Y2T1 843 aa13.14□□□□□ -0.31
CLHC1-210ENST00000464243 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
CLHC1-210ENST00000464243 SPRYD3Q8NCJ5 442 aa13.11□□□□□ -0.31
CLHC1-210ENST00000464243 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.1□□□□□ -0.31
CLHC1-210ENST00000464243 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
CLHC1-210ENST00000464243 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
CLHC1-210ENST00000464243 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
CLHC1-210ENST00000464243 MYT1LQ9UL68 1186 aa13.06□□□□□ -0.32
CLHC1-210ENST00000464243 EVI5O60447 810 aa13.05□□□□□ -0.32
CLHC1-210ENST00000464243 PTGER2P43116 358 aa13.05□□□□□ -0.32
CLHC1-210ENST00000464243 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
CLHC1-210ENST00000464243 RNF166Q96A37 237 aaPredicted RBP13.04□□□□□ -0.32
CLHC1-210ENST00000464243 PSEN2P49810 448 aa13.03□□□□□ -0.32
CLHC1-210ENST00000464243 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
CLHC1-210ENST00000464243 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
CLHC1-210ENST00000464243 ZNF454Q8N9F8 522 aa13.02□□□□□ -0.33
CLHC1-210ENST00000464243 FOSBP53539 338 aa13.01□□□□□ -0.33
CLHC1-210ENST00000464243 CAMK2BQ13554 666 aa13.01□□□□□ -0.33
CLHC1-210ENST00000464243 DMRTA1Q5VZB9 504 aa13.01□□□□□ -0.33
CLHC1-210ENST00000464243 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
CLHC1-210ENST00000464243 ADGRD1Q6QNK2 874 aa12.98□□□□□ -0.33
CLHC1-210ENST00000464243 JPH4Q96JJ6 628 aa12.97□□□□□ -0.33
CLHC1-210ENST00000464243 KCNK17Q96T54 332 aa12.97□□□□□ -0.33
CLHC1-210ENST00000464243 TK2O00142 265 aa12.95□□□□□ -0.34
CLHC1-210ENST00000464243 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
CLHC1-210ENST00000464243 DPYSL4O14531 572 aa12.91□□□□□ -0.34
CLHC1-210ENST00000464243 HRO43593 1189 aa12.91□□□□□ -0.34
CLHC1-210ENST00000464243 ZDHHC16Q969W1 377 aa12.9□□□□□ -0.34
CLHC1-210ENST00000464243 KCNH8Q96L42 1107 aa12.9□□□□□ -0.34
CLHC1-210ENST00000464243 ADAM33Q9BZ11 813 aa12.9□□□□□ -0.34
CLHC1-210ENST00000464243 PCDHGA10Q9Y5H3 936 aa12.88□□□□□ -0.35
CLHC1-210ENST00000464243 PTPREP23469 700 aa12.87□□□□□ -0.35
CLHC1-210ENST00000464243 VPS9D1Q9Y2B5 631 aa12.86□□□□□ -0.35
CLHC1-210ENST00000464243 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
CLHC1-210ENST00000464243 PHF14O94880 888 aa12.83□□□□□ -0.36
CLHC1-210ENST00000464243 TYW1BQ6NUM6 668 aa12.82□□□□□ -0.36
CLHC1-210ENST00000464243 ZBED2Q9BTP6 218 aa12.82□□□□□ -0.36
CLHC1-210ENST00000464243 E2F4Q16254 413 aa12.81□□□□□ -0.36
CLHC1-210ENST00000464243 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
CLHC1-210ENST00000464243 PDIA6Q15084 440 aa12.79□□□□□ -0.36
CLHC1-210ENST00000464243 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
CLHC1-210ENST00000464243 EPAS1Q99814 870 aa12.77□□□□□ -0.37
CLHC1-210ENST00000464243 PPP1R3GB7ZBB8 358 aa12.76□□□□□ -0.37
CLHC1-210ENST00000464243 BHMG1C9JSJ3 638 aaPredicted RBP12.76□□□□□ -0.37
CLHC1-210ENST00000464243 COL9A1P20849 921 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms