RNA–Protein interactions for RNA: ENST00000464225.5

CHKB-203, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-203ENST00000464225 ZFYVE16Q7Z3T8 1539 aa16.34■□□□□ 0.21
CHKB-203ENST00000464225 BCORL1Q5H9F3 1711 aa16.33■□□□□ 0.21
CHKB-203ENST00000464225 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.2
CHKB-203ENST00000464225 YEATS2Q9ULM3 1422 aa16.33■□□□□ 0.2
CHKB-203ENST00000464225 ARHGAP5Q13017 1502 aa16.33■□□□□ 0.2
CHKB-203ENST00000464225 HECW2Q9P2P5 1572 aa16.32■□□□□ 0.2
CHKB-203ENST00000464225 MAGI2Q86UL8 1455 aa16.31■□□□□ 0.2
CHKB-203ENST00000464225 ARID4BQ4LE39 1312 aaPredicted RBP16.31■□□□□ 0.2
CHKB-203ENST00000464225 PTPRMP28827 1452 aa16.29■□□□□ 0.2
CHKB-203ENST00000464225 SIGLEC1Q9BZZ2 1709 aa16.29■□□□□ 0.2
CHKB-203ENST00000464225 PREX2Q70Z35 1606 aa16.29■□□□□ 0.2
CHKB-203ENST00000464225 MADDQ8WXG6 1647 aa16.29■□□□□ 0.2
CHKB-203ENST00000464225 CDC42BPBQ9Y5S2 1711 aa16.28■□□□□ 0.2
CHKB-203ENST00000464225 ZNF518AQ6AHZ1 1483 aa16.26■□□□□ 0.19
CHKB-203ENST00000464225 CEP162Q5TB80 1403 aa16.26■□□□□ 0.19
CHKB-203ENST00000464225 KDM5CP41229 1560 aa16.26■□□□□ 0.19
CHKB-203ENST00000464225 ABCC1P33527 1531 aa16.24■□□□□ 0.19
CHKB-203ENST00000464225 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
CHKB-203ENST00000464225 AFAP1Q8N556 730 aa16.23■□□□□ 0.19
CHKB-203ENST00000464225 RIMS1Q86UR5 1692 aaKnown RBP16.23■□□□□ 0.19
CHKB-203ENST00000464225 ARHGEF12Q9NZN5 1544 aa16.23■□□□□ 0.19
CHKB-203ENST00000464225 ATP10AO60312 1499 aa16.22■□□□□ 0.19
CHKB-203ENST00000464225 C9orf84Q5VXU9 1444 aa16.22■□□□□ 0.19
CHKB-203ENST00000464225 ITSN2Q9NZM3 1697 aa16.2■□□□□ 0.18
CHKB-203ENST00000464225 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
CHKB-203ENST00000464225 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
CHKB-203ENST00000464225 DIP2CQ9Y2E4 1556 aa16.18■□□□□ 0.18
CHKB-203ENST00000464225 MTUS2Q5JR59 1369 aa16.18■□□□□ 0.18
CHKB-203ENST00000464225 MLECQ14165 292 aa16.18■□□□□ 0.18
CHKB-203ENST00000464225 SAMD9LQ8IVG5 1584 aa16.17■□□□□ 0.18
CHKB-203ENST00000464225 MLH3Q9UHC1 1453 aa16.17■□□□□ 0.18
CHKB-203ENST00000464225 ABCA6Q8N139 1617 aa16.17■□□□□ 0.18
CHKB-203ENST00000464225 FER1L4A9Z1Z3 1794 aa16.16■□□□□ 0.18
CHKB-203ENST00000464225 SYCP2Q9BX26 1530 aa16.15■□□□□ 0.18
CHKB-203ENST00000464225 MYT1LQ9UL68 1186 aa16.15■□□□□ 0.18
CHKB-203ENST00000464225 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.18
CHKB-203ENST00000464225 REREQ9P2R6 1566 aa16.14■□□□□ 0.17
CHKB-203ENST00000464225 LOC105371045A0A1W2PR82 267 aa16.14■□□□□ 0.17
CHKB-203ENST00000464225 ZNF777Q9ULD5 760 aaPredicted RBP16.14■□□□□ 0.17
CHKB-203ENST00000464225 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
CHKB-203ENST00000464225 LMTK3Q96Q04 1460 aa16.13■□□□□ 0.17
CHKB-203ENST00000464225 KIDINS220Q9ULH0 1771 aa16.13■□□□□ 0.17
CHKB-203ENST00000464225 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
CHKB-203ENST00000464225 CFDP1Q9UEE9 299 aaPredicted RBP16.12■□□□□ 0.17
CHKB-203ENST00000464225 TIAM1Q13009 1591 aa16.12■□□□□ 0.17
CHKB-203ENST00000464225 KIAA1107Q9UPP5 1409 aa16.11■□□□□ 0.17
CHKB-203ENST00000464225 PLEKHH2Q8IVE3 1493 aa16.1■□□□□ 0.17
CHKB-203ENST00000464225 AGLP35573 1532 aa16.09■□□□□ 0.17
CHKB-203ENST00000464225 HNRNPMP52272 730 aaKnown RBP eCLIP16.09■□□□□ 0.17
CHKB-203ENST00000464225 VPS8Q8N3P4 1428 aa16.08■□□□□ 0.16
CHKB-203ENST00000464225 INO80Q9ULG1 1556 aaPredicted RBP16.06■□□□□ 0.16
CHKB-203ENST00000464225 SPAG9O60271 1321 aaKnown RBP16.06■□□□□ 0.16
CHKB-203ENST00000464225 ATP7AQ04656 1500 aa16.05■□□□□ 0.16
CHKB-203ENST00000464225 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
CHKB-203ENST00000464225 NCOA2Q15596 1464 aa16.04■□□□□ 0.16
CHKB-203ENST00000464225 CEBPAP49715 358 aaPredicted RBP16.04■□□□□ 0.16
CHKB-203ENST00000464225 SUPT6HQ7KZ85 1726 aaKnown RBP16.04■□□□□ 0.16
CHKB-203ENST00000464225 HSPA2P54652 639 aa16.03■□□□□ 0.16
CHKB-203ENST00000464225 MBD5Q9P267 1494 aa16.03■□□□□ 0.16
CHKB-203ENST00000464225 PLXNC1O60486 1568 aa16.01■□□□□ 0.15
CHKB-203ENST00000464225 PREX1Q8TCU6 1659 aa16■□□□□ 0.15
CHKB-203ENST00000464225 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
CHKB-203ENST00000464225 ILDR1Q86SU0 546 aaPredicted RBP16■□□□□ 0.15
CHKB-203ENST00000464225 C3P01024 1663 aa15.99■□□□□ 0.15
CHKB-203ENST00000464225 A2MP01023 1474 aa15.99■□□□□ 0.15
CHKB-203ENST00000464225 CAMSAP2Q08AD1 1489 aa15.97■□□□□ 0.15
CHKB-203ENST00000464225 CNTLNQ9NXG0 1405 aa15.97■□□□□ 0.15
CHKB-203ENST00000464225 MAP3K1Q13233 1512 aa15.97■□□□□ 0.15
CHKB-203ENST00000464225 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
CHKB-203ENST00000464225 CCDC141Q6ZP82 1450 aa15.96■□□□□ 0.14
CHKB-203ENST00000464225 ADGBQ8N7X0 1667 aa15.95■□□□□ 0.14
CHKB-203ENST00000464225 RTEL1-TNFRSF6BF6WH68 1400 aa15.94■□□□□ 0.14
CHKB-203ENST00000464225 UHRF1BP1Q6BDS2 1440 aa15.94■□□□□ 0.14
CHKB-203ENST00000464225 KANK4Q5T7N3 995 aaPredicted RBP15.94■□□□□ 0.14
CHKB-203ENST00000464225 MROH2AA6NES4 1674 aa15.93■□□□□ 0.14
CHKB-203ENST00000464225 SETD1BQ9UPS6 1966 aaKnown RBP15.93■□□□□ 0.14
CHKB-203ENST00000464225 ARHGEF5Q12774 1597 aa15.91■□□□□ 0.14
CHKB-203ENST00000464225 CLTCQ00610 1675 aaKnown RBP15.9■□□□□ 0.14
CHKB-203ENST00000464225 ZMYM3Q14202 1370 aa15.89■□□□□ 0.13
CHKB-203ENST00000464225 DHX29Q7Z478 1369 aaKnown RBP15.89■□□□□ 0.13
CHKB-203ENST00000464225 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
CHKB-203ENST00000464225 GGT6Q6P531 493 aa15.89■□□□□ 0.13
CHKB-203ENST00000464225 NPATQ14207 1427 aa15.88■□□□□ 0.13
CHKB-203ENST00000464225 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
CHKB-203ENST00000464225 STRCQ7RTU9 1775 aa15.87■□□□□ 0.13
CHKB-203ENST00000464225 MIA2Q96PC5 1412 aa15.86■□□□□ 0.13
CHKB-203ENST00000464225 TSPY4P0CV99 314 aa15.84■□□□□ 0.13
CHKB-203ENST00000464225 TSPY10P0CW01 314 aa15.84■□□□□ 0.13
CHKB-203ENST00000464225 PPP6R1Q9UPN7 881 aa15.84■□□□□ 0.13
CHKB-203ENST00000464225 PTPRKQ15262 1439 aa15.84■□□□□ 0.13
CHKB-203ENST00000464225 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.13
CHKB-203ENST00000464225 KIF3BO15066 747 aa15.83■□□□□ 0.12
CHKB-203ENST00000464225 FBXO41Q8TF61 875 aa15.83■□□□□ 0.12
CHKB-203ENST00000464225 APLP2Q06481 763 aa15.82■□□□□ 0.12
CHKB-203ENST00000464225 MYO3AQ8NEV4 1616 aa15.82■□□□□ 0.12
CHKB-203ENST00000464225 KDM5DQ9BY66 1539 aa15.8■□□□□ 0.12
CHKB-203ENST00000464225 NCOA1Q15788 1441 aa15.8■□□□□ 0.12
CHKB-203ENST00000464225 ZNF142P52746 1687 aaPredicted RBP15.79■□□□□ 0.12
CHKB-203ENST00000464225 FAM135AQ9P2D6 1515 aa15.79■□□□□ 0.12
CHKB-203ENST00000464225 DMRT2Q9Y5R5 561 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms