RNA–Protein interactions for RNA: ENST00000463880.1

ARF4-202, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-202ENST00000463880 CCNB3Q8WWL7 1395 aa32.56■■■□□ 2.8
ARF4-202ENST00000463880 MAP3K1Q13233 1512 aa32.55■■■□□ 2.8
ARF4-202ENST00000463880 CDC42BPBQ9Y5S2 1711 aa32.54■■■□□ 2.8
ARF4-202ENST00000463880 ZNF777Q9ULD5 760 aaPredicted RBP32.53■■■□□ 2.8
ARF4-202ENST00000463880 CDC42BPAQ5VT25 1732 aa32.53■■■□□ 2.8
ARF4-202ENST00000463880 PREX2Q70Z35 1606 aa32.52■■■□□ 2.8
ARF4-202ENST00000463880 GPATCH8Q9UKJ3 1502 aaKnown RBP32.51■■■□□ 2.8
ARF4-202ENST00000463880 ADGRL1O94910 1474 aa32.51■■■□□ 2.79
ARF4-202ENST00000463880 SCAPERQ9BY12 1400 aa32.5■■■□□ 2.79
ARF4-202ENST00000463880 DENND4BO75064 1496 aaPredicted RBP32.49■■■□□ 2.79
ARF4-202ENST00000463880 NCOA2Q15596 1464 aa32.49■■■□□ 2.79
ARF4-202ENST00000463880 SUPT6HQ7KZ85 1726 aaKnown RBP32.49■■■□□ 2.79
ARF4-202ENST00000463880 CFDP1Q9UEE9 299 aaPredicted RBP32.47■■■□□ 2.79
ARF4-202ENST00000463880 FRMPD1Q5SYB0 1578 aa32.41■■■□□ 2.78
ARF4-202ENST00000463880 RICTORQ6R327 1708 aa32.37■■■□□ 2.77
ARF4-202ENST00000463880 ITSN2Q9NZM3 1697 aa32.36■■■□□ 2.77
ARF4-202ENST00000463880 POGZQ7Z3K3 1410 aa32.35■■■□□ 2.77
ARF4-202ENST00000463880 SAMD9LQ8IVG5 1584 aa32.35■■■□□ 2.77
ARF4-202ENST00000463880 AFAP1Q8N556 730 aa32.34■■■□□ 2.77
ARF4-202ENST00000463880 ABCC1P33527 1531 aa32.34■■■□□ 2.77
ARF4-202ENST00000463880 ZNF644Q9H582 1327 aaPredicted RBP32.33■■■□□ 2.77
ARF4-202ENST00000463880 ARHGEF12Q9NZN5 1544 aa32.33■■■□□ 2.77
ARF4-202ENST00000463880 HNRNPMP52272 730 aaKnown RBP eCLIP32.32■■■□□ 2.76
ARF4-202ENST00000463880 PPARGC1BQ86YN6 1023 aaKnown RBP32.3■■■□□ 2.76
ARF4-202ENST00000463880 MYT1LQ9UL68 1186 aa32.3■■■□□ 2.76
ARF4-202ENST00000463880 TRAPPC8Q9Y2L5 1435 aa32.29■■■□□ 2.76
ARF4-202ENST00000463880 SYCP2Q9BX26 1530 aa32.28■■■□□ 2.76
ARF4-202ENST00000463880 ZNF518AQ6AHZ1 1483 aa32.28■■■□□ 2.76
ARF4-202ENST00000463880 PLEKHH2Q8IVE3 1493 aa32.23■■■□□ 2.75
ARF4-202ENST00000463880 ZMYM4Q5VZL5 1548 aa32.23■■■□□ 2.75
ARF4-202ENST00000463880 MYOM3Q5VTT5 1437 aa32.23■■■□□ 2.75
ARF4-202ENST00000463880 YEATS2Q9ULM3 1422 aa32.22■■■□□ 2.75
ARF4-202ENST00000463880 KIAA1107Q9UPP5 1409 aa32.2■■■□□ 2.75
ARF4-202ENST00000463880 ZFYVE16Q7Z3T8 1539 aa32.2■■■□□ 2.74
ARF4-202ENST00000463880 CAMSAP2Q08AD1 1489 aa32.19■■■□□ 2.74
ARF4-202ENST00000463880 KDM5CP41229 1560 aa32.18■■■□□ 2.74
ARF4-202ENST00000463880 MAGI2Q86UL8 1455 aa32.16■■■□□ 2.74
ARF4-202ENST00000463880 ARHGEF40Q8TER5 1519 aa32.16■■■□□ 2.74
ARF4-202ENST00000463880 ARID4BQ4LE39 1312 aaPredicted RBP32.14■■■□□ 2.74
ARF4-202ENST00000463880 MIA2Q96PC5 1412 aa32.13■■■□□ 2.73
ARF4-202ENST00000463880 HECW2Q9P2P5 1572 aa32.12■■■□□ 2.73
ARF4-202ENST00000463880 SPAG9O60271 1321 aaKnown RBP32.12■■■□□ 2.73
ARF4-202ENST00000463880 MBD5Q9P267 1494 aa32.11■■■□□ 2.73
ARF4-202ENST00000463880 MLH3Q9UHC1 1453 aa32.1■■■□□ 2.73
ARF4-202ENST00000463880 KDM4FA0A1W2PPD8 638 aa32.07■■■□□ 2.72
ARF4-202ENST00000463880 ATP10AO60312 1499 aa32.06■■■□□ 2.72
ARF4-202ENST00000463880 FGD6Q6ZV73 1430 aa32.06■■■□□ 2.72
ARF4-202ENST00000463880 KIDINS220Q9ULH0 1771 aa32.04■■■□□ 2.72
ARF4-202ENST00000463880 PTPN23Q9H3S7 1636 aa32.04■■■□□ 2.72
ARF4-202ENST00000463880 CCDC141Q6ZP82 1450 aa32.03■■■□□ 2.72
ARF4-202ENST00000463880 ABCA6Q8N139 1617 aa32.02■■■□□ 2.72
ARF4-202ENST00000463880 RSPH4AQ5TD94 716 aa32.02■■■□□ 2.72
ARF4-202ENST00000463880 DIP2CQ9Y2E4 1556 aa32.02■■■□□ 2.72
ARF4-202ENST00000463880 C9orf84Q5VXU9 1444 aa32.01■■■□□ 2.72
ARF4-202ENST00000463880 ATP7AQ04656 1500 aa32■■■□□ 2.71
ARF4-202ENST00000463880 TSPY4P0CV99 314 aa31.99■■■□□ 2.71
ARF4-202ENST00000463880 TSPY10P0CW01 314 aa31.99■■■□□ 2.71
ARF4-202ENST00000463880 FAM50AQ14320 339 aaKnown RBP31.99■■■□□ 2.71
ARF4-202ENST00000463880 ARHGEF5Q12774 1597 aa31.98■■■□□ 2.71
ARF4-202ENST00000463880 MLECQ14165 292 aa31.97■■■□□ 2.71
ARF4-202ENST00000463880 SIGLEC1Q9BZZ2 1709 aa31.97■■■□□ 2.71
ARF4-202ENST00000463880 AEBP2Q6ZN18 517 aaPredicted RBP31.96■■■□□ 2.71
ARF4-202ENST00000463880 INO80Q9ULG1 1556 aaPredicted RBP31.96■■■□□ 2.71
ARF4-202ENST00000463880 TCOF1Q13428 1488 aaKnown RBP31.94■■■□□ 2.7
ARF4-202ENST00000463880 RTEL1-TNFRSF6BF6WH68 1400 aa31.91■■■□□ 2.7
ARF4-202ENST00000463880 BCORL1Q5H9F3 1711 aa31.88■■■□□ 2.69
ARF4-202ENST00000463880 ABCC5O15440 1437 aa31.86■■■□□ 2.69
ARF4-202ENST00000463880 A2MP01023 1474 aa31.84■■■□□ 2.69
ARF4-202ENST00000463880 DAPK1P53355 1430 aa31.84■■■□□ 2.69
ARF4-202ENST00000463880 REREQ9P2R6 1566 aa31.84■■■□□ 2.69
ARF4-202ENST00000463880 CHIC2Q9UKJ5 165 aa31.83■■■□□ 2.69
ARF4-202ENST00000463880 DNMT1P26358 1616 aaKnown RBP31.82■■■□□ 2.68
ARF4-202ENST00000463880 ADAMTSL3P82987 1691 aa31.81■■■□□ 2.68
ARF4-202ENST00000463880 ADGBQ8N7X0 1667 aa31.8■■■□□ 2.68
ARF4-202ENST00000463880 MAST1Q9Y2H9 1570 aa31.79■■■□□ 2.68
ARF4-202ENST00000463880 MADDQ8WXG6 1647 aa31.78■■■□□ 2.68
ARF4-202ENST00000463880 AGLP35573 1532 aa31.77■■■□□ 2.68
ARF4-202ENST00000463880 CROCC2H7BZ55 1655 aa31.76■■■□□ 2.68
ARF4-202ENST00000463880 ITGAEP38570 1179 aa31.76■■■□□ 2.67
ARF4-202ENST00000463880 DHX29Q7Z478 1369 aaKnown RBP31.76■■■□□ 2.67
ARF4-202ENST00000463880 PLPPR3Q6T4P5 718 aa31.75■■■□□ 2.67
ARF4-202ENST00000463880 SHANK2Q9UPX8 1470 aa31.74■■■□□ 2.67
ARF4-202ENST00000463880 RRP7BPQ9NSQ0 103 aa31.74■■■□□ 2.67
ARF4-202ENST00000463880 PLXNC1O60486 1568 aa31.73■■■□□ 2.67
ARF4-202ENST00000463880 GGT6Q6P531 493 aa31.72■■■□□ 2.67
ARF4-202ENST00000463880 RIMS1Q86UR5 1692 aaKnown RBP31.7■■■□□ 2.67
ARF4-202ENST00000463880 KIF3BO15066 747 aa31.7■■■□□ 2.67
ARF4-202ENST00000463880 ESF1Q9H501 851 aaKnown RBP31.68■■■□□ 2.66
ARF4-202ENST00000463880 FER1L4A9Z1Z3 1794 aa31.68■■■□□ 2.66
ARF4-202ENST00000463880 KIF15Q9NS87 1388 aa31.67■■■□□ 2.66
ARF4-202ENST00000463880 RRBP1Q9P2E9 1410 aaKnown RBP31.66■■■□□ 2.66
ARF4-202ENST00000463880 PTPRMP28827 1452 aa31.66■■■□□ 2.66
ARF4-202ENST00000463880 ANKRD30AQ9BXX3 1397 aa31.66■■■□□ 2.66
ARF4-202ENST00000463880 PTPRKQ15262 1439 aa31.65■■■□□ 2.66
ARF4-202ENST00000463880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.63■■■□□ 2.65
ARF4-202ENST00000463880 DUOX2Q9NRD8 1548 aa31.6■■■□□ 2.65
ARF4-202ENST00000463880 NCOA1Q15788 1441 aa31.6■■■□□ 2.65
ARF4-202ENST00000463880 CEBPAP49715 358 aaPredicted RBP31.58■■■□□ 2.65
ARF4-202ENST00000463880 ADGRL2O95490 1459 aa31.57■■■□□ 2.64
ARF4-202ENST00000463880 ERBINQ96RT1 1412 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms