RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MNX1P50219 401 aaPredicted RBP5.61□□□□□ -1.51
COL8A1-205ENST00000463753 MED1Q15648 1581 aaPredicted RBP5.61□□□□□ -1.51
COL8A1-205ENST00000463753 CFAP74Q9C0B2 1584 aa5.6□□□□□ -1.51
COL8A1-205ENST00000463753 PRR29P0C7W0 189 aa5.6□□□□□ -1.51
COL8A1-205ENST00000463753 DISP3Q9P2K9 1392 aa5.6□□□□□ -1.51
COL8A1-205ENST00000463753 REREQ9P2R6 1566 aa5.59□□□□□ -1.51
COL8A1-205ENST00000463753 PTPRMP28827 1452 aa5.59□□□□□ -1.51
COL8A1-205ENST00000463753 ZMYM4Q5VZL5 1548 aa5.58□□□□□ -1.52
COL8A1-205ENST00000463753 IFNLR1Q8IU57 520 aaPredicted RBP5.58□□□□□ -1.52
COL8A1-205ENST00000463753 PIP4P2Q8N4L2 257 aa5.58□□□□□ -1.52
COL8A1-205ENST00000463753 CERKQ8TCT0 537 aa5.58□□□□□ -1.52
COL8A1-205ENST00000463753 ABCC2Q92887 1545 aa5.58□□□□□ -1.52
COL8A1-205ENST00000463753 ANP32EQ9BTT0 268 aa5.57□□□□□ -1.52
COL8A1-205ENST00000463753 KDM5BQ9UGL1 1544 aa5.57□□□□□ -1.52
COL8A1-205ENST00000463753 ILDR2Q71H61 639 aa5.57□□□□□ -1.52
COL8A1-205ENST00000463753 CLEC11AQ9Y240 323 aa5.57□□□□□ -1.52
COL8A1-205ENST00000463753 FHAD1B1AJZ9 1412 aa5.56□□□□□ -1.52
COL8A1-205ENST00000463753 ZBTB47Q9UFB7 747 aaPredicted RBP5.56□□□□□ -1.52
COL8A1-205ENST00000463753 ARHGEF40Q8TER5 1519 aa5.56□□□□□ -1.52
COL8A1-205ENST00000463753 STRCQ7RTU9 1775 aa5.55□□□□□ -1.52
COL8A1-205ENST00000463753 ZNF142P52746 1687 aaPredicted RBP5.55□□□□□ -1.52
COL8A1-205ENST00000463753 LRP5O75197 1615 aa5.55□□□□□ -1.52
COL8A1-205ENST00000463753 MROH2AA6NES4 1674 aa5.55□□□□□ -1.52
COL8A1-205ENST00000463753 SLC24A1O60721 1099 aa5.55□□□□□ -1.52
COL8A1-205ENST00000463753 MAGI2Q86UL8 1455 aa5.53□□□□□ -1.52
COL8A1-205ENST00000463753 ZEB1P37275 1124 aaPredicted RBP5.53□□□□□ -1.52
COL8A1-205ENST00000463753 NUBP1P53384 320 aa5.52□□□□□ -1.53
COL8A1-205ENST00000463753 MIER1Q8N108 512 aa5.52□□□□□ -1.53
COL8A1-205ENST00000463753 CUL7Q14999 1698 aa5.52□□□□□ -1.53
COL8A1-205ENST00000463753 KIF21BO75037 1637 aa5.52□□□□□ -1.53
COL8A1-205ENST00000463753 BIVM-ERCC5R4GMW8 1640 aa5.52□□□□□ -1.53
COL8A1-205ENST00000463753 PLEKHG5O94827 1062 aa5.52□□□□□ -1.53
COL8A1-205ENST00000463753 NEO1Q92859 1461 aa5.52□□□□□ -1.53
COL8A1-205ENST00000463753 CUX1P39880 1505 aa5.52□□□□□ -1.53
COL8A1-205ENST00000463753 FAM135AQ9P2D6 1515 aa5.52□□□□□ -1.53
COL8A1-205ENST00000463753 PRKAR2AP13861 404 aaKnown RBP5.51□□□□□ -1.53
COL8A1-205ENST00000463753 SPOCK2Q92563 424 aa5.51□□□□□ -1.53
COL8A1-205ENST00000463753 FARP1Q9Y4F1 1045 aaPredicted RBP5.51□□□□□ -1.53
COL8A1-205ENST00000463753 CPS1P31327 1500 aa5.51□□□□□ -1.53
COL8A1-205ENST00000463753 AQRO60306 1485 aaKnown RBP eCLIP5.51□□□□□ -1.53
COL8A1-205ENST00000463753 PLCD3Q8N3E9 789 aa5.51□□□□□ -1.53
COL8A1-205ENST00000463753 CDK12Q9NYV4 1490 aaPredicted RBP5.51□□□□□ -1.53
COL8A1-205ENST00000463753 WIZO95785 1651 aa5.5□□□□□ -1.53
COL8A1-205ENST00000463753 SYNMO15061 1565 aa5.5□□□□□ -1.53
COL8A1-205ENST00000463753 SOGA1O94964 1423 aa5.5□□□□□ -1.53
COL8A1-205ENST00000463753 NPM1P06748 294 aaKnown RBP eCLIP5.5□□□□□ -1.53
COL8A1-205ENST00000463753 YEATS2Q9ULM3 1422 aa5.49□□□□□ -1.53
COL8A1-205ENST00000463753 TSPOAP1O95153 1857 aa5.49□□□□□ -1.53
COL8A1-205ENST00000463753 MADDQ8WXG6 1647 aa5.49□□□□□ -1.53
COL8A1-205ENST00000463753 CCDC88BA6NC98 1476 aa5.49□□□□□ -1.53
COL8A1-205ENST00000463753 ARHGEF12Q9NZN5 1544 aa5.49□□□□□ -1.53
COL8A1-205ENST00000463753 YTHDC1Q96MU7 727 aaKnown RBP5.49□□□□□ -1.53
COL8A1-205ENST00000463753 ANO8Q9HCE9 1232 aaPredicted RBP5.49□□□□□ -1.53
COL8A1-205ENST00000463753 ABCA9Q8IUA7 1624 aa5.48□□□□□ -1.53
COL8A1-205ENST00000463753 PLA2R1Q13018 1463 aa5.48□□□□□ -1.53
COL8A1-205ENST00000463753 AMER1Q5JTC6 1135 aaPredicted RBP5.48□□□□□ -1.53
COL8A1-205ENST00000463753 EFCAB5A4FU69 1503 aa5.48□□□□□ -1.53
COL8A1-205ENST00000463753 SETD1BQ9UPS6 1966 aaKnown RBP5.47□□□□□ -1.53
COL8A1-205ENST00000463753 C19orf67A6NJJ6 358 aa5.47□□□□□ -1.53
COL8A1-205ENST00000463753 CHADLQ6NUI6 762 aa5.47□□□□□ -1.53
COL8A1-205ENST00000463753 POGZQ7Z3K3 1410 aa5.46□□□□□ -1.53
COL8A1-205ENST00000463753 RIMS1Q86UR5 1692 aaKnown RBP5.46□□□□□ -1.54
COL8A1-205ENST00000463753 FANCAO15360 1455 aa5.46□□□□□ -1.54
COL8A1-205ENST00000463753 FGD5Q6ZNL6 1462 aa5.46□□□□□ -1.54
COL8A1-205ENST00000463753 CHRM1P11229 460 aaPredicted RBP5.46□□□□□ -1.54
COL8A1-205ENST00000463753 ZCCHC11Q5TAX3 1644 aaKnown RBP5.45□□□□□ -1.54
COL8A1-205ENST00000463753 KIF14Q15058 1648 aa5.45□□□□□ -1.54
COL8A1-205ENST00000463753 FRMPD1Q5SYB0 1578 aa5.44□□□□□ -1.54
COL8A1-205ENST00000463753 AGLP35573 1532 aa5.44□□□□□ -1.54
COL8A1-205ENST00000463753 RICTORQ6R327 1708 aa5.44□□□□□ -1.54
COL8A1-205ENST00000463753 EIF5BO60841 1220 aaKnown RBP5.44□□□□□ -1.54
COL8A1-205ENST00000463753 DCAF8L2P0C7V8 631 aa5.44□□□□□ -1.54
COL8A1-205ENST00000463753 TRIM26Q12899 539 aaPredicted RBP5.44□□□□□ -1.54
COL8A1-205ENST00000463753 GSE1Q14687 1217 aa5.44□□□□□ -1.54
COL8A1-205ENST00000463753 PCDH10Q9P2E7 1040 aa5.43□□□□□ -1.54
COL8A1-205ENST00000463753 KDM5CP41229 1560 aa5.43□□□□□ -1.54
COL8A1-205ENST00000463753 RASEFQ8IZ41 740 aa5.43□□□□□ -1.54
COL8A1-205ENST00000463753 PRG4Q92954 1404 aaPredicted RBP5.42□□□□□ -1.54
COL8A1-205ENST00000463753 PKD2Q13563 968 aa5.42□□□□□ -1.54
COL8A1-205ENST00000463753 KLHL34Q8N239 644 aa5.42□□□□□ -1.54
COL8A1-205ENST00000463753 FAM69CQ0P6D2 419 aa5.42□□□□□ -1.54
COL8A1-205ENST00000463753 NHSL1Q5SYE7 1610 aa5.41□□□□□ -1.54
COL8A1-205ENST00000463753 CHMP7Q8WUX9 453 aaPredicted RBP5.41□□□□□ -1.54
COL8A1-205ENST00000463753 CCDC136Q96JN2 1154 aa5.41□□□□□ -1.54
COL8A1-205ENST00000463753 COL17A1Q9UMD9 1497 aaPredicted RBP5.41□□□□□ -1.54
COL8A1-205ENST00000463753 NPATQ14207 1427 aa5.41□□□□□ -1.54
COL8A1-205ENST00000463753 ASXL2Q76L83 1435 aa5.41□□□□□ -1.54
COL8A1-205ENST00000463753 DIEXFQ68CQ4 756 aaKnown RBP5.41□□□□□ -1.54
COL8A1-205ENST00000463753 RNF17Q9BXT8 1623 aaKnown RBP5.41□□□□□ -1.54
COL8A1-205ENST00000463753 WDR7Q9Y4E6 1490 aa5.41□□□□□ -1.54
COL8A1-205ENST00000463753 CLCN6P51797 869 aa5.4□□□□□ -1.54
COL8A1-205ENST00000463753 FHOD3Q2V2M9 1422 aa5.4□□□□□ -1.54
COL8A1-205ENST00000463753 KIAA0556O60303 1618 aa5.4□□□□□ -1.54
COL8A1-205ENST00000463753 SUPT5HO00267 1087 aaKnown RBP5.4□□□□□ -1.54
COL8A1-205ENST00000463753 CCDC61Q9Y6R9 512 aa5.4□□□□□ -1.54
COL8A1-205ENST00000463753 ZNF579Q8NAF0 562 aaKnown RBP5.4□□□□□ -1.55
COL8A1-205ENST00000463753 FAM212AQ96EL1 285 aa5.4□□□□□ -1.55
COL8A1-205ENST00000463753 ABCA8O94911 1581 aa5.39□□□□□ -1.55
COL8A1-205ENST00000463753 SGIP1Q9BQI5 828 aa5.39□□□□□ -1.55
COL8A1-205ENST00000463753 UGGT2Q9NYU1 1516 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms