RNA–Protein interactions for RNA: ENST00000463224.5

SFR1-203, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

TSL 3

Gene SFR1, Length 496 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-203ENST00000463224 C2orf72A6NCS6 295 aa15.43■□□□□ 0.06
SFR1-203ENST00000463224 KIF3CO14782 793 aa15.43■□□□□ 0.06
SFR1-203ENST00000463224 GTPBP6O43824 516 aaPredicted RBP15.39■□□□□ 0.05
SFR1-203ENST00000463224 DOK7Q18PE1 504 aa15.38■□□□□ 0.05
SFR1-203ENST00000463224 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
SFR1-203ENST00000463224 EMP3P54852 163 aa15.33■□□□□ 0.04
SFR1-203ENST00000463224 POTEB3A0JP26 581 aa15.32■□□□□ 0.04
SFR1-203ENST00000463224 HOXB1P14653 301 aaPredicted RBP15.32■□□□□ 0.04
SFR1-203ENST00000463224 POTEBQ6S5H4 581 aa15.32■□□□□ 0.04
SFR1-203ENST00000463224 CDAN1Q8IWY9 1227 aa15.31■□□□□ 0.04
SFR1-203ENST00000463224 TMC2Q8TDI7 906 aa15.31■□□□□ 0.04
SFR1-203ENST00000463224 RYDENQ9NUL5 291 aaKnown RBP15.31■□□□□ 0.04
SFR1-203ENST00000463224 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
SFR1-203ENST00000463224 GPR153Q6NV75 609 aa15.28■□□□□ 0.04
SFR1-203ENST00000463224 FAM205CA6NFA0 338 aa15.26■□□□□ 0.03
SFR1-203ENST00000463224 RIMBP2O15034 1052 aa15.25■□□□□ 0.03
SFR1-203ENST00000463224 ARSIQ5FYB1 569 aa15.24■□□□□ 0.03
SFR1-203ENST00000463224 KHSRPQ92945 711 aaKnown RBP eCLIP15.24■□□□□ 0.03
SFR1-203ENST00000463224 HS3ST6Q96QI5 342 aa15.24■□□□□ 0.03
SFR1-203ENST00000463224 ZSWIM6Q9HCJ5 1215 aa15.24■□□□□ 0.03
SFR1-203ENST00000463224 GPHNQ9NQX3 736 aaPredicted RBP15.23■□□□□ 0.03
SFR1-203ENST00000463224 BBXQ8WY36 941 aaPredicted RBP15.2■□□□□ 0.02
SFR1-203ENST00000463224 FOXK1P85037 733 aa15.19■□□□□ 0.02
SFR1-203ENST00000463224 DSG2Q14126 1118 aa15.19■□□□□ 0.02
SFR1-203ENST00000463224 PLSCR2Q9NRY7 297 aa15.19■□□□□ 0.02
SFR1-203ENST00000463224 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
SFR1-203ENST00000463224 PLPP6Q8IY26 295 aa15.17■□□□□ 0.02
SFR1-203ENST00000463224 CRISPLD2Q9H0B8 497 aa15.17■□□□□ 0.02
SFR1-203ENST00000463224 SLC34A2O95436 690 aa15.16■□□□□ 0.02
SFR1-203ENST00000463224 ERBB3P21860 1342 aa15.15■□□□□ 0.02
SFR1-203ENST00000463224 CADPS2Q86UW7 1296 aa15.13■□□□□ 0.01
SFR1-203ENST00000463224 PCDHGA4Q9Y5G9 962 aa15.13■□□□□ 0.01
SFR1-203ENST00000463224 VARS2Q5ST30 1063 aaKnown RBP15.11■□□□□ 0.01
SFR1-203ENST00000463224 NUDT7P0C024 238 aa15.09■□□□□ 0.01
SFR1-203ENST00000463224 KRTAP3-3Q9BYR6 98 aa15.08■□□□□ 0
SFR1-203ENST00000463224 KRTAP3-2Q9BYR7 98 aa15.08■□□□□ 0
SFR1-203ENST00000463224 PTCD2Q8WV60 388 aaKnown RBP15.06■□□□□ 0
SFR1-203ENST00000463224 PDE4AP27815 886 aa15.05■□□□□ -0
SFR1-203ENST00000463224 PPP1R15BQ5SWA1 713 aa15.05■□□□□ -0
SFR1-203ENST00000463224 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
SFR1-203ENST00000463224 LARP6Q9BRS8 491 aaKnown RBP15.04■□□□□ -0
SFR1-203ENST00000463224 KDM4FA0A1W2PPD8 638 aa15.02■□□□□ -0
SFR1-203ENST00000463224 SPRYD3Q8NCJ5 442 aa15.01□□□□□ -0.01
SFR1-203ENST00000463224 LHX6Q9UPM6 363 aa15□□□□□ -0.01
SFR1-203ENST00000463224 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
SFR1-203ENST00000463224 MFSD10Q14728 455 aa14.98□□□□□ -0.01
SFR1-203ENST00000463224 PAXIP1Q6ZW49 1069 aaPredicted RBP14.97□□□□□ -0.01
SFR1-203ENST00000463224 ZNF687Q8N1G0 1237 aa14.97□□□□□ -0.01
SFR1-203ENST00000463224 OXER1Q8TDS5 423 aa14.97□□□□□ -0.01
SFR1-203ENST00000463224 UPF1Q92900 1129 aaKnown RBP eCLIP14.97□□□□□ -0.01
SFR1-203ENST00000463224 DDX27Q96GQ7 796 aaKnown RBP14.97□□□□□ -0.01
SFR1-203ENST00000463224 SPNS2Q8IVW8 549 aa14.95□□□□□ -0.02
SFR1-203ENST00000463224 CFAP44Q96MT7 982 aa14.95□□□□□ -0.02
SFR1-203ENST00000463224 TBC1D12O60347 775 aa14.88□□□□□ -0.03
SFR1-203ENST00000463224 POTEEQ6S8J3 1075 aa14.88□□□□□ -0.03
SFR1-203ENST00000463224 EMILIN3Q9NT22 766 aa14.88□□□□□ -0.03
SFR1-203ENST00000463224 MMRN1Q13201 1228 aa14.83□□□□□ -0.04
SFR1-203ENST00000463224 AXIN2Q9Y2T1 843 aa14.82□□□□□ -0.04
SFR1-203ENST00000463224 CAMK2BQ13554 666 aa14.78□□□□□ -0.04
SFR1-203ENST00000463224 EVI5O60447 810 aa14.77□□□□□ -0.05
SFR1-203ENST00000463224 ANO8Q9HCE9 1232 aaPredicted RBP14.76□□□□□ -0.05
SFR1-203ENST00000463224 PSDA5PKW4 1024 aaPredicted RBP14.75□□□□□ -0.05
SFR1-203ENST00000463224 MAP3K9P80192 1104 aa14.75□□□□□ -0.05
SFR1-203ENST00000463224 ANKRD13DQ6ZTN6 518 aa14.75□□□□□ -0.05
SFR1-203ENST00000463224 LSM11P83369 360 aaKnown RBP eCLIP14.74□□□□□ -0.05
SFR1-203ENST00000463224 PBX2P40425 430 aa14.72□□□□□ -0.05
SFR1-203ENST00000463224 PPP4R3BQ5MIZ7 849 aa14.71□□□□□ -0.05
SFR1-203ENST00000463224 PSEN2P49810 448 aa14.7□□□□□ -0.06
SFR1-203ENST00000463224 ZNF454Q8N9F8 522 aa14.7□□□□□ -0.06
SFR1-203ENST00000463224 TSHZ2Q9NRE2 1034 aa14.7□□□□□ -0.06
SFR1-203ENST00000463224 DPYSL4O14531 572 aa14.69□□□□□ -0.06
SFR1-203ENST00000463224 FOSBP53539 338 aa14.69□□□□□ -0.06
SFR1-203ENST00000463224 ARHGAP33O14559 1287 aa14.68□□□□□ -0.06
SFR1-203ENST00000463224 DMRTA1Q5VZB9 504 aa14.67□□□□□ -0.06
SFR1-203ENST00000463224 JPH4Q96JJ6 628 aa14.63□□□□□ -0.07
SFR1-203ENST00000463224 KCNK17Q96T54 332 aa14.62□□□□□ -0.07
SFR1-203ENST00000463224 ADAM33Q9BZ11 813 aa14.6□□□□□ -0.07
SFR1-203ENST00000463224 PCDHGA10Q9Y5H3 936 aa14.6□□□□□ -0.07
SFR1-203ENST00000463224 E2F4Q16254 413 aa14.59□□□□□ -0.07
SFR1-203ENST00000463224 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
SFR1-203ENST00000463224 MYT1LQ9UL68 1186 aa14.59□□□□□ -0.07
SFR1-203ENST00000463224 ADGRD1Q6QNK2 874 aa14.58□□□□□ -0.08
SFR1-203ENST00000463224 WDR70Q9NW82 654 aa14.58□□□□□ -0.08
SFR1-203ENST00000463224 ZDHHC16Q969W1 377 aa14.57□□□□□ -0.08
SFR1-203ENST00000463224 RNF166Q96A37 237 aaPredicted RBP14.55□□□□□ -0.08
SFR1-203ENST00000463224 TK2O00142 265 aa14.51□□□□□ -0.09
SFR1-203ENST00000463224 HRO43593 1189 aa14.51□□□□□ -0.09
SFR1-203ENST00000463224 PHF14O94880 888 aa14.51□□□□□ -0.09
SFR1-203ENST00000463224 PTPREP23469 700 aa14.51□□□□□ -0.09
SFR1-203ENST00000463224 PTGER2P43116 358 aa14.51□□□□□ -0.09
SFR1-203ENST00000463224 PDIA6Q15084 440 aa14.51□□□□□ -0.09
SFR1-203ENST00000463224 DDX12PQ92771 950 aa14.51□□□□□ -0.09
SFR1-203ENST00000463224 PLCB2Q00722 1185 aa14.5□□□□□ -0.09
SFR1-203ENST00000463224 ARIH1Q9Y4X5 557 aaPredicted RBP14.49□□□□□ -0.09
SFR1-203ENST00000463224 TYW1BQ6NUM6 668 aa14.48□□□□□ -0.09
SFR1-203ENST00000463224 VPS9D1Q9Y2B5 631 aa14.48□□□□□ -0.09
SFR1-203ENST00000463224 KCNH8Q96L42 1107 aa14.47□□□□□ -0.09
SFR1-203ENST00000463224 COL9A1P20849 921 aa14.45□□□□□ -0.1
SFR1-203ENST00000463224 ZBED2Q9BTP6 218 aa14.45□□□□□ -0.1
SFR1-203ENST00000463224 SPDYE16A6NNV3 312 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms