RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 PDAP1Q13442 181 aaKnown RBP9.8□□□□□ -0.84
VRK2-208ENST00000463222 C3orf67Q6ZVT6 689 aa9.8□□□□□ -0.84
VRK2-208ENST00000463222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.84
VRK2-208ENST00000463222 RYDENQ9NUL5 291 aaKnown RBP9.74□□□□□ -0.85
VRK2-208ENST00000463222 CABP2Q9NPB3 220 aa9.69□□□□□ -0.86
VRK2-208ENST00000463222 CADPS2Q86UW7 1296 aa9.68□□□□□ -0.86
VRK2-208ENST00000463222 MARVELD3Q96A59 401 aa9.68□□□□□ -0.86
VRK2-208ENST00000463222 BOLA1Q9Y3E2 137 aa9.66□□□□□ -0.86
VRK2-208ENST00000463222 EMP3P54852 163 aa9.65□□□□□ -0.86
VRK2-208ENST00000463222 DPY19L2Q6NUT2 758 aa9.65□□□□□ -0.86
VRK2-208ENST00000463222 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
VRK2-208ENST00000463222 WDR70Q9NW82 654 aa9.64□□□□□ -0.87
VRK2-208ENST00000463222 G3V3G9 751 aa9.63□□□□□ -0.87
VRK2-208ENST00000463222 MMRN1Q13201 1228 aa9.62□□□□□ -0.87
VRK2-208ENST00000463222 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
VRK2-208ENST00000463222 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
VRK2-208ENST00000463222 KCNV2Q8TDN2 545 aa9.59□□□□□ -0.87
VRK2-208ENST00000463222 HOXB3P14651 431 aaPredicted RBP9.58□□□□□ -0.88
VRK2-208ENST00000463222 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
VRK2-208ENST00000463222 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
VRK2-208ENST00000463222 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
VRK2-208ENST00000463222 PPP1R37O75864 691 aa9.55□□□□□ -0.88
VRK2-208ENST00000463222 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
VRK2-208ENST00000463222 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
VRK2-208ENST00000463222 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
VRK2-208ENST00000463222 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
VRK2-208ENST00000463222 DOK7Q18PE1 504 aa9.54□□□□□ -0.88
VRK2-208ENST00000463222 HOXB1P14653 301 aaPredicted RBP9.53□□□□□ -0.88
VRK2-208ENST00000463222 SOX12O15370 315 aa9.51□□□□□ -0.89
VRK2-208ENST00000463222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.51□□□□□ -0.89
VRK2-208ENST00000463222 LMOD2Q6P5Q4 547 aa9.5□□□□□ -0.89
VRK2-208ENST00000463222 MICALL2Q8IY33 904 aa9.5□□□□□ -0.89
VRK2-208ENST00000463222 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
VRK2-208ENST00000463222 PHF8Q9UPP1 1060 aa9.5□□□□□ -0.89
VRK2-208ENST00000463222 FBXO22Q8NEZ5 403 aa9.49□□□□□ -0.89
VRK2-208ENST00000463222 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
VRK2-208ENST00000463222 NLRP6P59044 892 aa9.48□□□□□ -0.89
VRK2-208ENST00000463222 ZSWIM6Q9HCJ5 1215 aa9.47□□□□□ -0.89
VRK2-208ENST00000463222 MS4A4AQ96JQ5 239 aa9.46□□□□□ -0.9
VRK2-208ENST00000463222 GTF3C3Q9Y5Q9 886 aa9.46□□□□□ -0.9
VRK2-208ENST00000463222 TMEM92Q6UXU6 159 aa9.45□□□□□ -0.9
VRK2-208ENST00000463222 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
VRK2-208ENST00000463222 E2F4Q16254 413 aa9.44□□□□□ -0.9
VRK2-208ENST00000463222 ERBB3P21860 1342 aa9.43□□□□□ -0.9
VRK2-208ENST00000463222 ARHGEF1Q92888 912 aaKnown RBP9.43□□□□□ -0.9
VRK2-208ENST00000463222 TIMELESSQ9UNS1 1208 aa9.42□□□□□ -0.9
VRK2-208ENST00000463222 TMEM132AQ24JP5 1023 aa9.4□□□□□ -0.9
VRK2-208ENST00000463222 SEMA3EO15041 775 aa9.39□□□□□ -0.91
VRK2-208ENST00000463222 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
VRK2-208ENST00000463222 NCKAP5LQ9HCH0 1330 aa9.38□□□□□ -0.91
VRK2-208ENST00000463222 VARS2Q5ST30 1063 aaKnown RBP9.37□□□□□ -0.91
VRK2-208ENST00000463222 GPR153Q6NV75 609 aa9.37□□□□□ -0.91
VRK2-208ENST00000463222 ZC3H15Q8WU90 426 aaKnown RBP9.36□□□□□ -0.91
VRK2-208ENST00000463222 PDE4AP27815 886 aa9.35□□□□□ -0.91
VRK2-208ENST00000463222 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
VRK2-208ENST00000463222 ZNF687Q8N1G0 1237 aa9.34□□□□□ -0.91
VRK2-208ENST00000463222 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
VRK2-208ENST00000463222 SLC24A3Q9HC58 644 aa9.31□□□□□ -0.92
VRK2-208ENST00000463222 PTGER2P43116 358 aa9.3□□□□□ -0.92
VRK2-208ENST00000463222 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
VRK2-208ENST00000463222 MFSD10Q14728 455 aa9.29□□□□□ -0.92
VRK2-208ENST00000463222 DDX27Q96GQ7 796 aaKnown RBP9.29□□□□□ -0.92
VRK2-208ENST00000463222 CRISPLD2Q9H0B8 497 aa9.29□□□□□ -0.92
VRK2-208ENST00000463222 KIF3CO14782 793 aa9.28□□□□□ -0.92
VRK2-208ENST00000463222 ARSIQ5FYB1 569 aa9.27□□□□□ -0.93
VRK2-208ENST00000463222 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
VRK2-208ENST00000463222 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
VRK2-208ENST00000463222 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
VRK2-208ENST00000463222 SMYD5Q6GMV2 418 aa9.25□□□□□ -0.93
VRK2-208ENST00000463222 C2orf72A6NCS6 295 aa9.22□□□□□ -0.93
VRK2-208ENST00000463222 ZMYND10O75800 440 aa9.22□□□□□ -0.93
VRK2-208ENST00000463222 SLC34A2O95436 690 aa9.22□□□□□ -0.93
VRK2-208ENST00000463222 CAMK2BQ13554 666 aa9.22□□□□□ -0.93
VRK2-208ENST00000463222 ARIH1Q9Y4X5 557 aaPredicted RBP9.21□□□□□ -0.94
VRK2-208ENST00000463222 MLLT3P42568 568 aaPredicted RBP9.2□□□□□ -0.94
VRK2-208ENST00000463222 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
VRK2-208ENST00000463222 C14orf37Q86TY3 774 aa9.2□□□□□ -0.94
VRK2-208ENST00000463222 KHSRPQ92945 711 aaKnown RBP eCLIP9.2□□□□□ -0.94
VRK2-208ENST00000463222 PBX2P40425 430 aa9.19□□□□□ -0.94
VRK2-208ENST00000463222 LSM11P83369 360 aaKnown RBP eCLIP9.19□□□□□ -0.94
VRK2-208ENST00000463222 RBM26Q5T8P6 1007 aaKnown RBP9.19□□□□□ -0.94
VRK2-208ENST00000463222 PPP1R15BQ5SWA1 713 aa9.18□□□□□ -0.94
VRK2-208ENST00000463222 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
VRK2-208ENST00000463222 GPHNQ9NQX3 736 aaPredicted RBP9.17□□□□□ -0.94
VRK2-208ENST00000463222 TMC2Q8TDI7 906 aa9.16□□□□□ -0.94
VRK2-208ENST00000463222 NUDT7P0C024 238 aa9.15□□□□□ -0.94
VRK2-208ENST00000463222 ANKRD13DQ6ZTN6 518 aa9.15□□□□□ -0.94
VRK2-208ENST00000463222 PCDHGA4Q9Y5G9 962 aa9.15□□□□□ -0.94
VRK2-208ENST00000463222 DPYSL4O14531 572 aa9.13□□□□□ -0.95
VRK2-208ENST00000463222 KRI1Q8N9T8 703 aaKnown RBP9.13□□□□□ -0.95
VRK2-208ENST00000463222 EMILIN3Q9NT22 766 aa9.13□□□□□ -0.95
VRK2-208ENST00000463222 DSG2Q14126 1118 aa9.12□□□□□ -0.95
VRK2-208ENST00000463222 GPIHBP1Q8IV16 184 aa9.12□□□□□ -0.95
VRK2-208ENST00000463222 LHX6Q9UPM6 363 aa9.12□□□□□ -0.95
VRK2-208ENST00000463222 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
VRK2-208ENST00000463222 AK7Q96M32 723 aa9.1□□□□□ -0.95
VRK2-208ENST00000463222 POTEEQ6S8J3 1075 aa9.09□□□□□ -0.95
VRK2-208ENST00000463222 GPBP1L1Q9HC44 474 aaPredicted RBP9.08□□□□□ -0.96
VRK2-208ENST00000463222 KDM4FA0A1W2PPD8 638 aa9.07□□□□□ -0.96
VRK2-208ENST00000463222 PTCD2Q8WV60 388 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms