RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 LARP6Q9BRS8 491 aaKnown RBP14.62□□□□□ -0.07
UBE4B-204ENST00000462658 PDE4AP27815 886 aa14.61□□□□□ -0.07
UBE4B-204ENST00000462658 POTEJP0CG39 1038 aa14.6□□□□□ -0.07
UBE4B-204ENST00000462658 WDR70Q9NW82 654 aa14.6□□□□□ -0.07
UBE4B-204ENST00000462658 TMEM92Q6UXU6 159 aa14.59□□□□□ -0.07
UBE4B-204ENST00000462658 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
UBE4B-204ENST00000462658 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
UBE4B-204ENST00000462658 TMC2Q8TDI7 906 aa14.55□□□□□ -0.08
UBE4B-204ENST00000462658 GPHNQ9NQX3 736 aaPredicted RBP14.55□□□□□ -0.08
UBE4B-204ENST00000462658 C2orf72A6NCS6 295 aa14.54□□□□□ -0.08
UBE4B-204ENST00000462658 MFSD10Q14728 455 aa14.53□□□□□ -0.08
UBE4B-204ENST00000462658 DDX27Q96GQ7 796 aaKnown RBP14.53□□□□□ -0.08
UBE4B-204ENST00000462658 KIF3CO14782 793 aa14.51□□□□□ -0.09
UBE4B-204ENST00000462658 DSG2Q14126 1118 aa14.5□□□□□ -0.09
UBE4B-204ENST00000462658 PPP1R15BQ5SWA1 713 aa14.49□□□□□ -0.09
UBE4B-204ENST00000462658 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.49□□□□□ -0.09
UBE4B-204ENST00000462658 FOXK1P85037 733 aa14.45□□□□□ -0.1
UBE4B-204ENST00000462658 E2F4Q16254 413 aa14.45□□□□□ -0.1
UBE4B-204ENST00000462658 KCNV2Q8TDN2 545 aa14.45□□□□□ -0.1
UBE4B-204ENST00000462658 PLPP6Q8IY26 295 aa14.44□□□□□ -0.1
UBE4B-204ENST00000462658 P3H3Q8IVL6 736 aa14.39□□□□□ -0.11
UBE4B-204ENST00000462658 SCUBE2Q9NQ36 999 aa14.39□□□□□ -0.11
UBE4B-204ENST00000462658 CAMK2BQ13554 666 aa14.37□□□□□ -0.11
UBE4B-204ENST00000462658 LHX8Q68G74 356 aa14.36□□□□□ -0.11
UBE4B-204ENST00000462658 MAMSTRQ6ZN01 415 aa14.36□□□□□ -0.11
UBE4B-204ENST00000462658 SLAIN1Q8ND83 568 aa14.36□□□□□ -0.11
UBE4B-204ENST00000462658 EMILIN3Q9NT22 766 aa14.34□□□□□ -0.11
UBE4B-204ENST00000462658 ABCC9O60706 1549 aa14.34□□□□□ -0.11
UBE4B-204ENST00000462658 OTUD5Q96G74 571 aa14.32□□□□□ -0.12
UBE4B-204ENST00000462658 BCANQ96GW7 911 aa14.32□□□□□ -0.12
UBE4B-204ENST00000462658 ARHGEF1Q92888 912 aaKnown RBP14.29□□□□□ -0.12
UBE4B-204ENST00000462658 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBE4B-204ENST00000462658 NBR1Q14596 966 aa14.28□□□□□ -0.12
UBE4B-204ENST00000462658 DPYSL4O14531 572 aa14.27□□□□□ -0.13
UBE4B-204ENST00000462658 ARIH1Q9Y4X5 557 aaPredicted RBP14.23□□□□□ -0.13
UBE4B-204ENST00000462658 OXER1Q8TDS5 423 aa14.21□□□□□ -0.13
UBE4B-204ENST00000462658 MAP3K9P80192 1104 aa14.19□□□□□ -0.14
UBE4B-204ENST00000462658 HOXB3P14651 431 aaPredicted RBP14.18□□□□□ -0.14
UBE4B-204ENST00000462658 SEMA3EO15041 775 aa14.17□□□□□ -0.14
UBE4B-204ENST00000462658 SLC34A2O95436 690 aa14.17□□□□□ -0.14
UBE4B-204ENST00000462658 PTCD2Q8WV60 388 aaKnown RBP14.17□□□□□ -0.14
UBE4B-204ENST00000462658 DOK7Q18PE1 504 aa14.14□□□□□ -0.15
UBE4B-204ENST00000462658 PCDHGA4Q9Y5G9 962 aa14.13□□□□□ -0.15
UBE4B-204ENST00000462658 PDIA6Q15084 440 aa14.12□□□□□ -0.15
UBE4B-204ENST00000462658 KHSRPQ92945 711 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBE4B-204ENST00000462658 TBC1D12O60347 775 aa14.1□□□□□ -0.15
UBE4B-204ENST00000462658 SPDYE16A6NNV3 312 aaPredicted RBP14.09□□□□□ -0.15
UBE4B-204ENST00000462658 EVI5O60447 810 aa14.09□□□□□ -0.15
UBE4B-204ENST00000462658 TESPA1A2RU30 521 aaPredicted RBP14.08□□□□□ -0.16
UBE4B-204ENST00000462658 MLLT3P42568 568 aaPredicted RBP14.08□□□□□ -0.16
UBE4B-204ENST00000462658 ARSIQ5FYB1 569 aa14.08□□□□□ -0.16
UBE4B-204ENST00000462658 ZNF710Q8N1W2 664 aa14.07□□□□□ -0.16
UBE4B-204ENST00000462658 SNPHO15079 494 aa14.06□□□□□ -0.16
UBE4B-204ENST00000462658 RIMBP2O15034 1052 aa14.05□□□□□ -0.16
UBE4B-204ENST00000462658 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
UBE4B-204ENST00000462658 NUDT7P0C024 238 aa14.03□□□□□ -0.16
UBE4B-204ENST00000462658 DDX12PQ92771 950 aa14.01□□□□□ -0.17
UBE4B-204ENST00000462658 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
UBE4B-204ENST00000462658 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
UBE4B-204ENST00000462658 GRXCR2A6NFK2 248 aa14□□□□□ -0.17
UBE4B-204ENST00000462658 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
UBE4B-204ENST00000462658 ZNF316A6NFI3 1004 aaPredicted RBP13.98□□□□□ -0.17
UBE4B-204ENST00000462658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.97□□□□□ -0.17
UBE4B-204ENST00000462658 PTGER2P43116 358 aa13.95□□□□□ -0.18
UBE4B-204ENST00000462658 HOXB1P14653 301 aaPredicted RBP13.94□□□□□ -0.18
UBE4B-204ENST00000462658 SMYD5Q6GMV2 418 aa13.94□□□□□ -0.18
UBE4B-204ENST00000462658 LMOD2Q6P5Q4 547 aa13.94□□□□□ -0.18
UBE4B-204ENST00000462658 TULP1O00294 542 aaPredicted RBP13.93□□□□□ -0.18
UBE4B-204ENST00000462658 ST18O60284 1047 aa13.91□□□□□ -0.18
UBE4B-204ENST00000462658 RBM26Q5T8P6 1007 aaKnown RBP13.91□□□□□ -0.18
UBE4B-204ENST00000462658 FAM163AQ96GL9 167 aaPredicted RBP13.91□□□□□ -0.18
UBE4B-204ENST00000462658 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
UBE4B-204ENST00000462658 OSBPP22059 807 aa13.89□□□□□ -0.19
UBE4B-204ENST00000462658 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
UBE4B-204ENST00000462658 PCDHGA10Q9Y5H3 936 aa13.88□□□□□ -0.19
UBE4B-204ENST00000462658 PRKCSHP14314 528 aaPredicted RBP13.87□□□□□ -0.19
UBE4B-204ENST00000462658 TPRNQ4KMQ1 711 aa13.87□□□□□ -0.19
UBE4B-204ENST00000462658 PHF14O94880 888 aa13.86□□□□□ -0.19
UBE4B-204ENST00000462658 ZNF454Q8N9F8 522 aa13.86□□□□□ -0.19
UBE4B-204ENST00000462658 FOSBP53539 338 aa13.85□□□□□ -0.19
UBE4B-204ENST00000462658 JPH4Q96JJ6 628 aa13.85□□□□□ -0.19
UBE4B-204ENST00000462658 MARVELD3Q96A59 401 aa13.84□□□□□ -0.19
UBE4B-204ENST00000462658 RBM33Q96EV2 1170 aaKnown RBP13.84□□□□□ -0.19
UBE4B-204ENST00000462658 EPAS1Q99814 870 aa13.82□□□□□ -0.2
UBE4B-204ENST00000462658 LCE2DQ5TA82 110 aaPredicted RBP13.81□□□□□ -0.2
UBE4B-204ENST00000462658 TYW1BQ6NUM6 668 aa13.81□□□□□ -0.2
UBE4B-204ENST00000462658 NUTM2FA1L443 756 aa13.78□□□□□ -0.2
UBE4B-204ENST00000462658 EMP3P54852 163 aa13.78□□□□□ -0.2
UBE4B-204ENST00000462658 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
UBE4B-204ENST00000462658 GPIHBP1Q8IV16 184 aa13.78□□□□□ -0.2
UBE4B-204ENST00000462658 ZDHHC16Q969W1 377 aa13.78□□□□□ -0.2
UBE4B-204ENST00000462658 ZCCHC6Q5VYS8 1495 aaKnown RBP13.78□□□□□ -0.2
UBE4B-204ENST00000462658 MAP3K7O43318 606 aa13.77□□□□□ -0.21
UBE4B-204ENST00000462658 ERBB3P21860 1342 aa13.77□□□□□ -0.21
UBE4B-204ENST00000462658 TSR1Q2NL82 804 aaKnown RBP13.76□□□□□ -0.21
UBE4B-204ENST00000462658 ZC3H15Q8WU90 426 aaKnown RBP13.76□□□□□ -0.21
UBE4B-204ENST00000462658 ADAM33Q9BZ11 813 aa13.76□□□□□ -0.21
UBE4B-204ENST00000462658 PPP4R3BQ5MIZ7 849 aa13.75□□□□□ -0.21
UBE4B-204ENST00000462658 FBXW7Q969H0 707 aa13.75□□□□□ -0.21
UBE4B-204ENST00000462658 CDHR5Q9HBB8 845 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms