RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 FRMPD1Q5SYB0 1578 aa36.79■■■■□ 3.48
LIMK2-206ENST00000462625 PREX2Q70Z35 1606 aa36.77■■■■□ 3.48
LIMK2-206ENST00000462625 SCAPERQ9BY12 1400 aa36.76■■■■□ 3.47
LIMK2-206ENST00000462625 CDC42BPAQ5VT25 1732 aa36.75■■■■□ 3.47
LIMK2-206ENST00000462625 EHBP1L1Q8N3D4 1523 aa36.71■■■■□ 3.47
LIMK2-206ENST00000462625 KDM4FA0A1W2PPD8 638 aa36.7■■■■□ 3.47
LIMK2-206ENST00000462625 POGZQ7Z3K3 1410 aa36.67■■■■□ 3.46
LIMK2-206ENST00000462625 ZMYM4Q5VZL5 1548 aa36.66■■■■□ 3.46
LIMK2-206ENST00000462625 TIAM1Q13009 1591 aa36.64■■■■□ 3.46
LIMK2-206ENST00000462625 CCNB3Q8WWL7 1395 aa36.63■■■■□ 3.45
LIMK2-206ENST00000462625 MAGI2Q86UL8 1455 aa36.62■■■■□ 3.45
LIMK2-206ENST00000462625 GPATCH8Q9UKJ3 1502 aaKnown RBP36.61■■■■□ 3.45
LIMK2-206ENST00000462625 ARHGEF40Q8TER5 1519 aa36.6■■■■□ 3.45
LIMK2-206ENST00000462625 ZNF518AQ6AHZ1 1483 aa36.6■■■■□ 3.45
LIMK2-206ENST00000462625 ZFYVE16Q7Z3T8 1539 aa36.58■■■■□ 3.45
LIMK2-206ENST00000462625 SUPT6HQ7KZ85 1726 aaKnown RBP36.57■■■■□ 3.45
LIMK2-206ENST00000462625 ZNF777Q9ULD5 760 aaPredicted RBP36.56■■■■□ 3.44
LIMK2-206ENST00000462625 ABCC1P33527 1531 aa36.55■■■■□ 3.44
LIMK2-206ENST00000462625 CFDP1Q9UEE9 299 aaPredicted RBP36.55■■■■□ 3.44
LIMK2-206ENST00000462625 ITSN2Q9NZM3 1697 aa36.54■■■■□ 3.44
LIMK2-206ENST00000462625 MAP3K1Q13233 1512 aa36.54■■■■□ 3.44
LIMK2-206ENST00000462625 ARID4BQ4LE39 1312 aaPredicted RBP36.51■■■■□ 3.43
LIMK2-206ENST00000462625 APLP2Q06481 763 aa36.5■■■■□ 3.43
LIMK2-206ENST00000462625 AFAP1Q8N556 730 aa36.49■■■■□ 3.43
LIMK2-206ENST00000462625 MYT1LQ9UL68 1186 aa36.49■■■■□ 3.43
LIMK2-206ENST00000462625 KDM5CP41229 1560 aa36.49■■■■□ 3.43
LIMK2-206ENST00000462625 SAMD9LQ8IVG5 1584 aa36.49■■■■□ 3.43
LIMK2-206ENST00000462625 LRRC9Q6ZRR7 1453 aa36.48■■■■□ 3.43
LIMK2-206ENST00000462625 YEATS2Q9ULM3 1422 aa36.47■■■■□ 3.43
LIMK2-206ENST00000462625 PLEKHH2Q8IVE3 1493 aa36.46■■■■□ 3.43
LIMK2-206ENST00000462625 NCOA2Q15596 1464 aa36.45■■■■□ 3.43
LIMK2-206ENST00000462625 ARHGEF12Q9NZN5 1544 aa36.44■■■■□ 3.42
LIMK2-206ENST00000462625 HECW2Q9P2P5 1572 aa36.44■■■■□ 3.42
LIMK2-206ENST00000462625 TRAPPC8Q9Y2L5 1435 aa36.42■■■■□ 3.42
LIMK2-206ENST00000462625 SYCP2Q9BX26 1530 aa36.4■■■■□ 3.42
LIMK2-206ENST00000462625 ATP10AO60312 1499 aa36.4■■■■□ 3.42
LIMK2-206ENST00000462625 KIAA1107Q9UPP5 1409 aa36.4■■■■□ 3.42
LIMK2-206ENST00000462625 BCORL1Q5H9F3 1711 aa36.39■■■■□ 3.42
LIMK2-206ENST00000462625 MLH3Q9UHC1 1453 aa36.38■■■■□ 3.41
LIMK2-206ENST00000462625 HNRNPMP52272 730 aaKnown RBP eCLIP36.36■■■■□ 3.41
LIMK2-206ENST00000462625 C9orf84Q5VXU9 1444 aa36.35■■■■□ 3.41
LIMK2-206ENST00000462625 KANK4Q5T7N3 995 aaPredicted RBP36.35■■■■□ 3.41
LIMK2-206ENST00000462625 ADAMTSL3P82987 1691 aa36.35■■■■□ 3.41
LIMK2-206ENST00000462625 DIP2CQ9Y2E4 1556 aa36.29■■■■□ 3.4
LIMK2-206ENST00000462625 KIDINS220Q9ULH0 1771 aa36.28■■■■□ 3.4
LIMK2-206ENST00000462625 SPAG9O60271 1321 aaKnown RBP36.28■■■■□ 3.4
LIMK2-206ENST00000462625 SIGLEC1Q9BZZ2 1709 aa36.27■■■■□ 3.4
LIMK2-206ENST00000462625 ZNF644Q9H582 1327 aaPredicted RBP36.27■■■■□ 3.4
LIMK2-206ENST00000462625 ABCA6Q8N139 1617 aa36.26■■■■□ 3.4
LIMK2-206ENST00000462625 REREQ9P2R6 1566 aa36.23■■■■□ 3.39
LIMK2-206ENST00000462625 MADDQ8WXG6 1647 aa36.23■■■■□ 3.39
LIMK2-206ENST00000462625 CAMSAP2Q08AD1 1489 aa36.21■■■■□ 3.39
LIMK2-206ENST00000462625 ATP7AQ04656 1500 aa36.18■■■■□ 3.38
LIMK2-206ENST00000462625 MLECQ14165 292 aa36.18■■■■□ 3.38
LIMK2-206ENST00000462625 RSPH4AQ5TD94 716 aa36.18■■■■□ 3.38
LIMK2-206ENST00000462625 MBD5Q9P267 1494 aa36.18■■■■□ 3.38
LIMK2-206ENST00000462625 PTPRMP28827 1452 aa36.16■■■■□ 3.38
LIMK2-206ENST00000462625 RIMS1Q86UR5 1692 aaKnown RBP36.16■■■■□ 3.38
LIMK2-206ENST00000462625 MYOM3Q5VTT5 1437 aa36.16■■■■□ 3.38
LIMK2-206ENST00000462625 INO80Q9ULG1 1556 aaPredicted RBP36.15■■■■□ 3.38
LIMK2-206ENST00000462625 FER1L4A9Z1Z3 1794 aa36.14■■■■□ 3.38
LIMK2-206ENST00000462625 MIA2Q96PC5 1412 aa36.13■■■■□ 3.37
LIMK2-206ENST00000462625 CCDC141Q6ZP82 1450 aa36.11■■■■□ 3.37
LIMK2-206ENST00000462625 AGLP35573 1532 aa36.1■■■■□ 3.37
LIMK2-206ENST00000462625 ARHGEF5Q12774 1597 aa36.07■■■■□ 3.37
LIMK2-206ENST00000462625 RTEL1-TNFRSF6BF6WH68 1400 aa36.07■■■■□ 3.36
LIMK2-206ENST00000462625 ADGBQ8N7X0 1667 aa36.07■■■■□ 3.36
LIMK2-206ENST00000462625 TSPY4P0CV99 314 aa36.04■■■■□ 3.36
LIMK2-206ENST00000462625 TSPY10P0CW01 314 aa36.04■■■■□ 3.36
LIMK2-206ENST00000462625 A2MP01023 1474 aa36.01■■■■□ 3.36
LIMK2-206ENST00000462625 ESF1Q9H501 851 aaKnown RBP35.98■■■■□ 3.35
LIMK2-206ENST00000462625 PTPN23Q9H3S7 1636 aa35.95■■■■□ 3.35
LIMK2-206ENST00000462625 PLXNC1O60486 1568 aa35.95■■■■□ 3.35
LIMK2-206ENST00000462625 PLPPR3Q6T4P5 718 aa35.93■■■■□ 3.34
LIMK2-206ENST00000462625 FGD6Q6ZV73 1430 aa35.91■■■■□ 3.34
LIMK2-206ENST00000462625 MAST1Q9Y2H9 1570 aa35.88■■■■□ 3.33
LIMK2-206ENST00000462625 DHX29Q7Z478 1369 aaKnown RBP35.88■■■■□ 3.33
LIMK2-206ENST00000462625 CNTLNQ9NXG0 1405 aa35.84■■■■□ 3.33
LIMK2-206ENST00000462625 TCOF1Q13428 1488 aaKnown RBP35.83■■■■□ 3.33
LIMK2-206ENST00000462625 GGT6Q6P531 493 aa35.8■■■■□ 3.32
LIMK2-206ENST00000462625 CROCC2H7BZ55 1655 aa35.79■■■■□ 3.32
LIMK2-206ENST00000462625 PPP6R1Q9UPN7 881 aa35.78■■■■□ 3.32
LIMK2-206ENST00000462625 C3P01024 1663 aa35.78■■■■□ 3.32
LIMK2-206ENST00000462625 DNMT1P26358 1616 aaKnown RBP35.77■■■■□ 3.32
LIMK2-206ENST00000462625 CEBPAP49715 358 aaPredicted RBP35.77■■■■□ 3.32
LIMK2-206ENST00000462625 MROH2AA6NES4 1674 aa35.77■■■■□ 3.32
LIMK2-206ENST00000462625 SETD1BQ9UPS6 1966 aaKnown RBP35.76■■■■□ 3.32
LIMK2-206ENST00000462625 SHANK2Q9UPX8 1470 aa35.75■■■■□ 3.31
LIMK2-206ENST00000462625 KIF3BO15066 747 aa35.75■■■■□ 3.31
LIMK2-206ENST00000462625 ABCC5O15440 1437 aa35.74■■■■□ 3.31
LIMK2-206ENST00000462625 DAPK1P53355 1430 aa35.74■■■■□ 3.31
LIMK2-206ENST00000462625 CLTCQ00610 1675 aaKnown RBP35.72■■■■□ 3.31
LIMK2-206ENST00000462625 FAM50AQ14320 339 aaKnown RBP35.71■■■■□ 3.31
LIMK2-206ENST00000462625 PREX1Q8TCU6 1659 aa35.69■■■■□ 3.3
LIMK2-206ENST00000462625 LMTK3Q96Q04 1460 aa35.68■■■■□ 3.3
LIMK2-206ENST00000462625 PPARGC1BQ86YN6 1023 aaKnown RBP35.66■■■■□ 3.3
LIMK2-206ENST00000462625 ZMYM3Q14202 1370 aa35.65■■■■□ 3.3
LIMK2-206ENST00000462625 DUOX2Q9NRD8 1548 aa35.65■■■■□ 3.3
LIMK2-206ENST00000462625 EIF2AK4Q9P2K8 1649 aaKnown RBP35.65■■■■□ 3.3
LIMK2-206ENST00000462625 FAM135AQ9P2D6 1515 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms