RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 VPS8Q8N3P4 1428 aa29.46■■■□□ 2.31
CDKN1A-206ENST00000462537 CDC42BPBQ9Y5S2 1711 aa29.46■■■□□ 2.31
CDKN1A-206ENST00000462537 SCAPERQ9BY12 1400 aa29.44■■■□□ 2.3
CDKN1A-206ENST00000462537 CDC42BPAQ5VT25 1732 aa29.43■■■□□ 2.3
CDKN1A-206ENST00000462537 EHBP1L1Q8N3D4 1523 aa29.41■■■□□ 2.3
CDKN1A-206ENST00000462537 KDM4FA0A1W2PPD8 638 aa29.41■■■□□ 2.3
CDKN1A-206ENST00000462537 POGZQ7Z3K3 1410 aa29.37■■■□□ 2.29
CDKN1A-206ENST00000462537 ZMYM4Q5VZL5 1548 aa29.36■■■□□ 2.29
CDKN1A-206ENST00000462537 TIAM1Q13009 1591 aa29.35■■■□□ 2.29
CDKN1A-206ENST00000462537 ARHGEF40Q8TER5 1519 aa29.35■■■□□ 2.29
CDKN1A-206ENST00000462537 CCNB3Q8WWL7 1395 aa29.33■■■□□ 2.29
CDKN1A-206ENST00000462537 ZFYVE16Q7Z3T8 1539 aa29.31■■■□□ 2.28
CDKN1A-206ENST00000462537 GPATCH8Q9UKJ3 1502 aaKnown RBP29.31■■■□□ 2.28
CDKN1A-206ENST00000462537 ABCC1P33527 1531 aa29.3■■■□□ 2.28
CDKN1A-206ENST00000462537 ZNF518AQ6AHZ1 1483 aa29.29■■■□□ 2.28
CDKN1A-206ENST00000462537 ZNF777Q9ULD5 760 aaPredicted RBP29.29■■■□□ 2.28
CDKN1A-206ENST00000462537 ITSN2Q9NZM3 1697 aa29.28■■■□□ 2.28
CDKN1A-206ENST00000462537 MAGI2Q86UL8 1455 aa29.28■■■□□ 2.28
CDKN1A-206ENST00000462537 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
CDKN1A-206ENST00000462537 YEATS2Q9ULM3 1422 aa29.26■■■□□ 2.27
CDKN1A-206ENST00000462537 SAMD9LQ8IVG5 1584 aa29.25■■■□□ 2.27
CDKN1A-206ENST00000462537 ARID4BQ4LE39 1312 aaPredicted RBP29.24■■■□□ 2.27
CDKN1A-206ENST00000462537 CFDP1Q9UEE9 299 aaPredicted RBP29.24■■■□□ 2.27
CDKN1A-206ENST00000462537 AFAP1Q8N556 730 aa29.23■■■□□ 2.27
CDKN1A-206ENST00000462537 KDM5CP41229 1560 aa29.22■■■□□ 2.27
CDKN1A-206ENST00000462537 ARHGEF12Q9NZN5 1544 aa29.22■■■□□ 2.27
CDKN1A-206ENST00000462537 MYT1LQ9UL68 1186 aa29.22■■■□□ 2.27
CDKN1A-206ENST00000462537 NCOA2Q15596 1464 aa29.21■■■□□ 2.27
CDKN1A-206ENST00000462537 LRRC9Q6ZRR7 1453 aa29.21■■■□□ 2.27
CDKN1A-206ENST00000462537 HECW2Q9P2P5 1572 aa29.2■■■□□ 2.26
CDKN1A-206ENST00000462537 MAP3K1Q13233 1512 aa29.2■■■□□ 2.26
CDKN1A-206ENST00000462537 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.26
CDKN1A-206ENST00000462537 SYCP2Q9BX26 1530 aa29.19■■■□□ 2.26
CDKN1A-206ENST00000462537 APLP2Q06481 763 aa29.17■■■□□ 2.26
CDKN1A-206ENST00000462537 PLEKHH2Q8IVE3 1493 aa29.16■■■□□ 2.26
CDKN1A-206ENST00000462537 BCORL1Q5H9F3 1711 aa29.15■■■□□ 2.26
CDKN1A-206ENST00000462537 ATP10AO60312 1499 aa29.14■■■□□ 2.26
CDKN1A-206ENST00000462537 HNRNPMP52272 730 aaKnown RBP eCLIP29.13■■■□□ 2.25
CDKN1A-206ENST00000462537 SIGLEC1Q9BZZ2 1709 aa29.12■■■□□ 2.25
CDKN1A-206ENST00000462537 KANK4Q5T7N3 995 aaPredicted RBP29.12■■■□□ 2.25
CDKN1A-206ENST00000462537 ADAMTSL3P82987 1691 aa29.12■■■□□ 2.25
CDKN1A-206ENST00000462537 C9orf84Q5VXU9 1444 aa29.11■■■□□ 2.25
CDKN1A-206ENST00000462537 MLH3Q9UHC1 1453 aa29.1■■■□□ 2.25
CDKN1A-206ENST00000462537 KIAA1107Q9UPP5 1409 aa29.1■■■□□ 2.25
CDKN1A-206ENST00000462537 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
CDKN1A-206ENST00000462537 ABCA6Q8N139 1617 aa29.09■■■□□ 2.25
CDKN1A-206ENST00000462537 ZNF644Q9H582 1327 aaPredicted RBP29.07■■■□□ 2.24
CDKN1A-206ENST00000462537 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
CDKN1A-206ENST00000462537 MADDQ8WXG6 1647 aa29.05■■■□□ 2.24
CDKN1A-206ENST00000462537 SPAG9O60271 1321 aaKnown RBP29.03■■■□□ 2.24
CDKN1A-206ENST00000462537 MLECQ14165 292 aa29.02■■■□□ 2.24
CDKN1A-206ENST00000462537 CAMSAP2Q08AD1 1489 aa29.02■■■□□ 2.24
CDKN1A-206ENST00000462537 ATP7AQ04656 1500 aa28.99■■■□□ 2.23
CDKN1A-206ENST00000462537 RIMS1Q86UR5 1692 aaKnown RBP28.99■■■□□ 2.23
CDKN1A-206ENST00000462537 REREQ9P2R6 1566 aa28.99■■■□□ 2.23
CDKN1A-206ENST00000462537 INO80Q9ULG1 1556 aaPredicted RBP28.98■■■□□ 2.23
CDKN1A-206ENST00000462537 PTPRMP28827 1452 aa28.97■■■□□ 2.23
CDKN1A-206ENST00000462537 MBD5Q9P267 1494 aa28.97■■■□□ 2.23
CDKN1A-206ENST00000462537 FER1L4A9Z1Z3 1794 aa28.96■■■□□ 2.23
CDKN1A-206ENST00000462537 MYOM3Q5VTT5 1437 aa28.94■■■□□ 2.22
CDKN1A-206ENST00000462537 CCDC141Q6ZP82 1450 aa28.91■■■□□ 2.22
CDKN1A-206ENST00000462537 AGLP35573 1532 aa28.89■■■□□ 2.21
CDKN1A-206ENST00000462537 MIA2Q96PC5 1412 aa28.88■■■□□ 2.21
CDKN1A-206ENST00000462537 ARHGEF5Q12774 1597 aa28.88■■■□□ 2.21
CDKN1A-206ENST00000462537 ADGBQ8N7X0 1667 aa28.86■■■□□ 2.21
CDKN1A-206ENST00000462537 RSPH4AQ5TD94 716 aa28.86■■■□□ 2.21
CDKN1A-206ENST00000462537 PLPPR3Q6T4P5 718 aa28.86■■■□□ 2.21
CDKN1A-206ENST00000462537 RTEL1-TNFRSF6BF6WH68 1400 aa28.85■■■□□ 2.21
CDKN1A-206ENST00000462537 A2MP01023 1474 aa28.84■■■□□ 2.21
CDKN1A-206ENST00000462537 PTPN23Q9H3S7 1636 aa28.8■■■□□ 2.2
CDKN1A-206ENST00000462537 PLXNC1O60486 1568 aa28.8■■■□□ 2.2
CDKN1A-206ENST00000462537 TSPY4P0CV99 314 aa28.8■■■□□ 2.2
CDKN1A-206ENST00000462537 TSPY10P0CW01 314 aa28.8■■■□□ 2.2
CDKN1A-206ENST00000462537 ESF1Q9H501 851 aaKnown RBP28.78■■■□□ 2.2
CDKN1A-206ENST00000462537 FGD6Q6ZV73 1430 aa28.77■■■□□ 2.2
CDKN1A-206ENST00000462537 MAST1Q9Y2H9 1570 aa28.72■■■□□ 2.19
CDKN1A-206ENST00000462537 DHX29Q7Z478 1369 aaKnown RBP28.71■■■□□ 2.19
CDKN1A-206ENST00000462537 TCOF1Q13428 1488 aaKnown RBP28.69■■■□□ 2.18
CDKN1A-206ENST00000462537 CROCC2H7BZ55 1655 aa28.69■■■□□ 2.18
CDKN1A-206ENST00000462537 CEBPAP49715 358 aaPredicted RBP28.68■■■□□ 2.18
CDKN1A-206ENST00000462537 GGT6Q6P531 493 aa28.67■■■□□ 2.18
CDKN1A-206ENST00000462537 CNTLNQ9NXG0 1405 aa28.67■■■□□ 2.18
CDKN1A-206ENST00000462537 C3P01024 1663 aa28.66■■■□□ 2.18
CDKN1A-206ENST00000462537 DNMT1P26358 1616 aaKnown RBP28.65■■■□□ 2.18
CDKN1A-206ENST00000462537 PPARGC1BQ86YN6 1023 aaKnown RBP28.64■■■□□ 2.18
CDKN1A-206ENST00000462537 CLTCQ00610 1675 aaKnown RBP28.64■■■□□ 2.17
CDKN1A-206ENST00000462537 ABCC5O15440 1437 aa28.62■■■□□ 2.17
CDKN1A-206ENST00000462537 DAPK1P53355 1430 aa28.62■■■□□ 2.17
CDKN1A-206ENST00000462537 MROH2AA6NES4 1674 aa28.62■■■□□ 2.17
CDKN1A-206ENST00000462537 SHANK2Q9UPX8 1470 aa28.62■■■□□ 2.17
CDKN1A-206ENST00000462537 KIF3BO15066 747 aa28.61■■■□□ 2.17
CDKN1A-206ENST00000462537 FAM50AQ14320 339 aaKnown RBP28.61■■■□□ 2.17
CDKN1A-206ENST00000462537 LMTK3Q96Q04 1460 aa28.6■■■□□ 2.17
CDKN1A-206ENST00000462537 PREX1Q8TCU6 1659 aa28.58■■■□□ 2.17
CDKN1A-206ENST00000462537 PPP6R1Q9UPN7 881 aa28.55■■■□□ 2.16
CDKN1A-206ENST00000462537 DUOX2Q9NRD8 1548 aa28.53■■■□□ 2.16
CDKN1A-206ENST00000462537 ZMYM3Q14202 1370 aa28.53■■■□□ 2.16
CDKN1A-206ENST00000462537 CHIC2Q9UKJ5 165 aa28.53■■■□□ 2.16
CDKN1A-206ENST00000462537 EIF2AK4Q9P2K8 1649 aaKnown RBP28.53■■■□□ 2.16
CDKN1A-206ENST00000462537 KIF15Q9NS87 1388 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms