RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 ARHGAP5Q13017 1502 aa18.38■□□□□ 0.53
CPNE1-221ENST00000462352 CDC42BPBQ9Y5S2 1711 aa18.37■□□□□ 0.53
CPNE1-221ENST00000462352 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
CPNE1-221ENST00000462352 CFAP74Q9C0B2 1584 aa18.36■□□□□ 0.53
CPNE1-221ENST00000462352 PHLDB1Q86UU1 1377 aa18.35■□□□□ 0.53
CPNE1-221ENST00000462352 AKNAQ7Z591 1439 aa18.34■□□□□ 0.53
CPNE1-221ENST00000462352 KDM6BO15054 1643 aa18.34■□□□□ 0.53
CPNE1-221ENST00000462352 CFDP1Q9UEE9 299 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-221ENST00000462352 ITSN2Q9NZM3 1697 aa18.33■□□□□ 0.52
CPNE1-221ENST00000462352 COL17A1Q9UMD9 1497 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-221ENST00000462352 PPARGC1BQ86YN6 1023 aaKnown RBP18.32■□□□□ 0.52
CPNE1-221ENST00000462352 ZNF777Q9ULD5 760 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-221ENST00000462352 ADGRL1O94910 1474 aa18.3■□□□□ 0.52
CPNE1-221ENST00000462352 MYOM3Q5VTT5 1437 aa18.3■□□□□ 0.52
CPNE1-221ENST00000462352 SCAPERQ9BY12 1400 aa18.28■□□□□ 0.52
CPNE1-221ENST00000462352 SAMD9LQ8IVG5 1584 aa18.28■□□□□ 0.52
CPNE1-221ENST00000462352 ABCC1P33527 1531 aa18.26■□□□□ 0.51
CPNE1-221ENST00000462352 DENND4BO75064 1496 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-221ENST00000462352 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
CPNE1-221ENST00000462352 MIA2Q96PC5 1412 aa18.25■□□□□ 0.51
CPNE1-221ENST00000462352 RAPGEF3O95398 923 aa18.25■□□□□ 0.51
CPNE1-221ENST00000462352 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
CPNE1-221ENST00000462352 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
CPNE1-221ENST00000462352 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
CPNE1-221ENST00000462352 FRMPD1Q5SYB0 1578 aa18.22■□□□□ 0.51
CPNE1-221ENST00000462352 CAMSAP2Q08AD1 1489 aa18.22■□□□□ 0.51
CPNE1-221ENST00000462352 SYCP2Q9BX26 1530 aa18.22■□□□□ 0.51
CPNE1-221ENST00000462352 FGD6Q6ZV73 1430 aa18.22■□□□□ 0.51
CPNE1-221ENST00000462352 KIAA1107Q9UPP5 1409 aa18.22■□□□□ 0.51
CPNE1-221ENST00000462352 RICTORQ6R327 1708 aa18.21■□□□□ 0.51
CPNE1-221ENST00000462352 HNRNPMP52272 730 aaKnown RBP eCLIP18.2■□□□□ 0.5
CPNE1-221ENST00000462352 TRAPPC8Q9Y2L5 1435 aa18.19■□□□□ 0.5
CPNE1-221ENST00000462352 ZNF518AQ6AHZ1 1483 aa18.19■□□□□ 0.5
CPNE1-221ENST00000462352 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
CPNE1-221ENST00000462352 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
CPNE1-221ENST00000462352 MBD5Q9P267 1494 aa18.18■□□□□ 0.5
CPNE1-221ENST00000462352 TCOF1Q13428 1488 aaKnown RBP18.16■□□□□ 0.5
CPNE1-221ENST00000462352 KDM5CP41229 1560 aa18.16■□□□□ 0.5
CPNE1-221ENST00000462352 ZMYM4Q5VZL5 1548 aa18.15■□□□□ 0.5
CPNE1-221ENST00000462352 CCDC141Q6ZP82 1450 aa18.13■□□□□ 0.49
CPNE1-221ENST00000462352 ARHGEF5Q12774 1597 aa18.13■□□□□ 0.49
CPNE1-221ENST00000462352 RSPH4AQ5TD94 716 aa18.12■□□□□ 0.49
CPNE1-221ENST00000462352 MAGI2Q86UL8 1455 aa18.12■□□□□ 0.49
CPNE1-221ENST00000462352 HECW2Q9P2P5 1572 aa18.1■□□□□ 0.49
CPNE1-221ENST00000462352 MLH3Q9UHC1 1453 aa18.1■□□□□ 0.49
CPNE1-221ENST00000462352 FAM50AQ14320 339 aaKnown RBP18.1■□□□□ 0.49
CPNE1-221ENST00000462352 ZFYVE16Q7Z3T8 1539 aa18.09■□□□□ 0.49
CPNE1-221ENST00000462352 YEATS2Q9ULM3 1422 aa18.09■□□□□ 0.49
CPNE1-221ENST00000462352 SPAG9O60271 1321 aaKnown RBP18.09■□□□□ 0.49
CPNE1-221ENST00000462352 RRBP1Q9P2E9 1410 aaKnown RBP18.08■□□□□ 0.49
CPNE1-221ENST00000462352 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.48
CPNE1-221ENST00000462352 ARHGEF40Q8TER5 1519 aa18.08■□□□□ 0.48
CPNE1-221ENST00000462352 ABCC5O15440 1437 aa18.06■□□□□ 0.48
CPNE1-221ENST00000462352 DNMT1P26358 1616 aaKnown RBP18.06■□□□□ 0.48
CPNE1-221ENST00000462352 INO80Q9ULG1 1556 aaPredicted RBP18.06■□□□□ 0.48
CPNE1-221ENST00000462352 TSPY4P0CV99 314 aa18.06■□□□□ 0.48
CPNE1-221ENST00000462352 TSPY10P0CW01 314 aa18.06■□□□□ 0.48
CPNE1-221ENST00000462352 ATP7AQ04656 1500 aa18.06■□□□□ 0.48
CPNE1-221ENST00000462352 KIDINS220Q9ULH0 1771 aa18.06■□□□□ 0.48
CPNE1-221ENST00000462352 DAPK1P53355 1430 aa18.06■□□□□ 0.48
CPNE1-221ENST00000462352 RTEL1-TNFRSF6BF6WH68 1400 aa18.05■□□□□ 0.48
CPNE1-221ENST00000462352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.48
CPNE1-221ENST00000462352 ABCA6Q8N139 1617 aa18.03■□□□□ 0.48
CPNE1-221ENST00000462352 DIP2CQ9Y2E4 1556 aa18.03■□□□□ 0.48
CPNE1-221ENST00000462352 ATP10AO60312 1499 aa18.02■□□□□ 0.48
CPNE1-221ENST00000462352 SHANK2Q9UPX8 1470 aa18.02■□□□□ 0.48
CPNE1-221ENST00000462352 C9orf84Q5VXU9 1444 aa18.02■□□□□ 0.48
CPNE1-221ENST00000462352 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
CPNE1-221ENST00000462352 CROCC2H7BZ55 1655 aa18.02■□□□□ 0.47
CPNE1-221ENST00000462352 PTPRKQ15262 1439 aa17.98■□□□□ 0.47
CPNE1-221ENST00000462352 CHIC2Q9UKJ5 165 aa17.97■□□□□ 0.47
CPNE1-221ENST00000462352 REREQ9P2R6 1566 aa17.96■□□□□ 0.47
CPNE1-221ENST00000462352 ITGAEP38570 1179 aa17.96■□□□□ 0.47
CPNE1-221ENST00000462352 PLXNC1O60486 1568 aa17.96■□□□□ 0.46
CPNE1-221ENST00000462352 SIGLEC1Q9BZZ2 1709 aa17.95■□□□□ 0.46
CPNE1-221ENST00000462352 ADGBQ8N7X0 1667 aa17.95■□□□□ 0.46
CPNE1-221ENST00000462352 A2MP01023 1474 aa17.95■□□□□ 0.46
CPNE1-221ENST00000462352 ARID4BQ4LE39 1312 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-221ENST00000462352 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
CPNE1-221ENST00000462352 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
CPNE1-221ENST00000462352 ANKRD30AQ9BXX3 1397 aa17.92■□□□□ 0.46
CPNE1-221ENST00000462352 NCOA1Q15788 1441 aa17.92■□□□□ 0.46
CPNE1-221ENST00000462352 KIF15Q9NS87 1388 aa17.91■□□□□ 0.46
CPNE1-221ENST00000462352 RRP7BPQ9NSQ0 103 aa17.91■□□□□ 0.46
CPNE1-221ENST00000462352 AGLP35573 1532 aa17.91■□□□□ 0.46
CPNE1-221ENST00000462352 DUOX2Q9NRD8 1548 aa17.89■□□□□ 0.45
CPNE1-221ENST00000462352 ROCK1Q13464 1354 aa17.89■□□□□ 0.45
CPNE1-221ENST00000462352 BCORL1Q5H9F3 1711 aa17.86■□□□□ 0.45
CPNE1-221ENST00000462352 MLECQ14165 292 aa17.86■□□□□ 0.45
CPNE1-221ENST00000462352 ERBINQ96RT1 1412 aa17.84■□□□□ 0.45
CPNE1-221ENST00000462352 KIF3BO15066 747 aa17.84■□□□□ 0.45
CPNE1-221ENST00000462352 EIF2AK4Q9P2K8 1649 aaKnown RBP17.83■□□□□ 0.44
CPNE1-221ENST00000462352 KDM4FA0A1W2PPD8 638 aa17.82■□□□□ 0.44
CPNE1-221ENST00000462352 ANKRD50Q9ULJ7 1429 aa17.81■□□□□ 0.44
CPNE1-221ENST00000462352 ADAMTSL3P82987 1691 aa17.81■□□□□ 0.44
CPNE1-221ENST00000462352 GGT6Q6P531 493 aa17.81■□□□□ 0.44
CPNE1-221ENST00000462352 MADDQ8WXG6 1647 aa17.78■□□□□ 0.44
CPNE1-221ENST00000462352 HFM1A2PYH4 1435 aa17.78■□□□□ 0.44
CPNE1-221ENST00000462352 NAIPQ13075 1403 aa17.78■□□□□ 0.44
CPNE1-221ENST00000462352 RNF17Q9BXT8 1623 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms