RNA–Protein interactions for RNA: ENST00000462219.5

LINC00879-201, long intergenic non-protein coding RNA 879, humanhuman

TSL 2

Gene LINC00879, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-201ENST00000462219 CFAP74Q9C0B2 1584 aa20.49■□□□□ 0.87
LINC00879-201ENST00000462219 AKNAQ7Z591 1439 aa20.48■□□□□ 0.87
LINC00879-201ENST00000462219 GPATCH8Q9UKJ3 1502 aaKnown RBP20.48■□□□□ 0.87
LINC00879-201ENST00000462219 SUPT6HQ7KZ85 1726 aaKnown RBP20.47■□□□□ 0.87
LINC00879-201ENST00000462219 EFCAB2Q5VUJ9 269 aa20.45■□□□□ 0.86
LINC00879-201ENST00000462219 ARHGAP5Q13017 1502 aa20.44■□□□□ 0.86
LINC00879-201ENST00000462219 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
LINC00879-201ENST00000462219 APLP2Q06481 763 aa20.42■□□□□ 0.86
LINC00879-201ENST00000462219 RICTORQ6R327 1708 aa20.41■□□□□ 0.86
LINC00879-201ENST00000462219 CCNB3Q8WWL7 1395 aa20.41■□□□□ 0.86
LINC00879-201ENST00000462219 FRMPD1Q5SYB0 1578 aa20.41■□□□□ 0.86
LINC00879-201ENST00000462219 ADGRL1O94910 1474 aa20.4■□□□□ 0.86
LINC00879-201ENST00000462219 RAPGEF3O95398 923 aa20.4■□□□□ 0.86
LINC00879-201ENST00000462219 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
LINC00879-201ENST00000462219 DENND4BO75064 1496 aaPredicted RBP20.38■□□□□ 0.85
LINC00879-201ENST00000462219 SCAPERQ9BY12 1400 aa20.38■□□□□ 0.85
LINC00879-201ENST00000462219 SAMD9LQ8IVG5 1584 aa20.37■□□□□ 0.85
LINC00879-201ENST00000462219 ARHGEF12Q9NZN5 1544 aa20.36■□□□□ 0.85
LINC00879-201ENST00000462219 CFDP1Q9UEE9 299 aaPredicted RBP20.35■□□□□ 0.85
LINC00879-201ENST00000462219 ABCC1P33527 1531 aa20.35■□□□□ 0.85
LINC00879-201ENST00000462219 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
LINC00879-201ENST00000462219 ZNF777Q9ULD5 760 aaPredicted RBP20.32■□□□□ 0.84
LINC00879-201ENST00000462219 POGZQ7Z3K3 1410 aa20.32■□□□□ 0.84
LINC00879-201ENST00000462219 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
LINC00879-201ENST00000462219 ZMYM4Q5VZL5 1548 aa20.3■□□□□ 0.84
LINC00879-201ENST00000462219 TRAPPC8Q9Y2L5 1435 aa20.29■□□□□ 0.84
LINC00879-201ENST00000462219 AFAP1Q8N556 730 aa20.28■□□□□ 0.84
LINC00879-201ENST00000462219 KDM5CP41229 1560 aa20.28■□□□□ 0.84
LINC00879-201ENST00000462219 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.84
LINC00879-201ENST00000462219 KIAA1107Q9UPP5 1409 aa20.27■□□□□ 0.84
LINC00879-201ENST00000462219 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.84
LINC00879-201ENST00000462219 ZNF518AQ6AHZ1 1483 aa20.27■□□□□ 0.84
LINC00879-201ENST00000462219 PLEKHH2Q8IVE3 1493 aa20.26■□□□□ 0.83
LINC00879-201ENST00000462219 HNRNPMP52272 730 aaKnown RBP eCLIP20.26■□□□□ 0.83
LINC00879-201ENST00000462219 MBD5Q9P267 1494 aa20.24■□□□□ 0.83
LINC00879-201ENST00000462219 MIA2Q96PC5 1412 aa20.24■□□□□ 0.83
LINC00879-201ENST00000462219 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
LINC00879-201ENST00000462219 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
LINC00879-201ENST00000462219 YEATS2Q9ULM3 1422 aa20.22■□□□□ 0.83
LINC00879-201ENST00000462219 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
LINC00879-201ENST00000462219 ARHGEF40Q8TER5 1519 aa20.21■□□□□ 0.83
LINC00879-201ENST00000462219 KIDINS220Q9ULH0 1771 aa20.21■□□□□ 0.83
LINC00879-201ENST00000462219 MLH3Q9UHC1 1453 aa20.2■□□□□ 0.82
LINC00879-201ENST00000462219 ZFYVE16Q7Z3T8 1539 aa20.2■□□□□ 0.82
LINC00879-201ENST00000462219 HECW2Q9P2P5 1572 aa20.2■□□□□ 0.82
LINC00879-201ENST00000462219 FGD6Q6ZV73 1430 aa20.18■□□□□ 0.82
LINC00879-201ENST00000462219 PTPN23Q9H3S7 1636 aa20.17■□□□□ 0.82
LINC00879-201ENST00000462219 SIGLEC1Q9BZZ2 1709 aa20.17■□□□□ 0.82
LINC00879-201ENST00000462219 ARHGEF5Q12774 1597 aa20.17■□□□□ 0.82
LINC00879-201ENST00000462219 TCOF1Q13428 1488 aaKnown RBP20.15■□□□□ 0.82
LINC00879-201ENST00000462219 DIP2CQ9Y2E4 1556 aa20.15■□□□□ 0.82
LINC00879-201ENST00000462219 ABCA6Q8N139 1617 aa20.15■□□□□ 0.82
LINC00879-201ENST00000462219 INO80Q9ULG1 1556 aaPredicted RBP20.14■□□□□ 0.81
LINC00879-201ENST00000462219 ATP10AO60312 1499 aa20.13■□□□□ 0.81
LINC00879-201ENST00000462219 CCDC141Q6ZP82 1450 aa20.13■□□□□ 0.81
LINC00879-201ENST00000462219 SPAG9O60271 1321 aaKnown RBP20.13■□□□□ 0.81
LINC00879-201ENST00000462219 RSPH4AQ5TD94 716 aa20.13■□□□□ 0.81
LINC00879-201ENST00000462219 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
LINC00879-201ENST00000462219 KDM4FA0A1W2PPD8 638 aa20.1■□□□□ 0.81
LINC00879-201ENST00000462219 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
LINC00879-201ENST00000462219 RTEL1-TNFRSF6BF6WH68 1400 aa20.09■□□□□ 0.81
LINC00879-201ENST00000462219 REREQ9P2R6 1566 aa20.08■□□□□ 0.81
LINC00879-201ENST00000462219 C9orf84Q5VXU9 1444 aa20.08■□□□□ 0.8
LINC00879-201ENST00000462219 DNMT1P26358 1616 aaKnown RBP20.06■□□□□ 0.8
LINC00879-201ENST00000462219 ABCC5O15440 1437 aa20.06■□□□□ 0.8
LINC00879-201ENST00000462219 BCORL1Q5H9F3 1711 aa20.06■□□□□ 0.8
LINC00879-201ENST00000462219 MAST1Q9Y2H9 1570 aa20.06■□□□□ 0.8
LINC00879-201ENST00000462219 CROCC2H7BZ55 1655 aa20.06■□□□□ 0.8
LINC00879-201ENST00000462219 ADGBQ8N7X0 1667 aa20.04■□□□□ 0.8
LINC00879-201ENST00000462219 TSPY4P0CV99 314 aa20.04■□□□□ 0.8
LINC00879-201ENST00000462219 TSPY10P0CW01 314 aa20.04■□□□□ 0.8
LINC00879-201ENST00000462219 ADAMTSL3P82987 1691 aa20.03■□□□□ 0.8
LINC00879-201ENST00000462219 ARID4BQ4LE39 1312 aaPredicted RBP20.02■□□□□ 0.8
LINC00879-201ENST00000462219 DAPK1P53355 1430 aa20.02■□□□□ 0.8
LINC00879-201ENST00000462219 AGLP35573 1532 aa20.02■□□□□ 0.79
LINC00879-201ENST00000462219 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
LINC00879-201ENST00000462219 PLXNC1O60486 1568 aa20■□□□□ 0.79
LINC00879-201ENST00000462219 A2MP01023 1474 aa20■□□□□ 0.79
LINC00879-201ENST00000462219 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
LINC00879-201ENST00000462219 RRBP1Q9P2E9 1410 aaKnown RBP19.98■□□□□ 0.79
LINC00879-201ENST00000462219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.97■□□□□ 0.79
LINC00879-201ENST00000462219 DHX29Q7Z478 1369 aaKnown RBP19.96■□□□□ 0.79
LINC00879-201ENST00000462219 MADDQ8WXG6 1647 aa19.95■□□□□ 0.78
LINC00879-201ENST00000462219 PTPRKQ15262 1439 aa19.94■□□□□ 0.78
LINC00879-201ENST00000462219 MLECQ14165 292 aa19.94■□□□□ 0.78
LINC00879-201ENST00000462219 CHIC2Q9UKJ5 165 aa19.92■□□□□ 0.78
LINC00879-201ENST00000462219 FER1L4A9Z1Z3 1794 aa19.92■□□□□ 0.78
LINC00879-201ENST00000462219 NCOA1Q15788 1441 aa19.91■□□□□ 0.78
LINC00879-201ENST00000462219 ADGRL2O95490 1459 aa19.91■□□□□ 0.78
LINC00879-201ENST00000462219 RIMS1Q86UR5 1692 aaKnown RBP19.9■□□□□ 0.78
LINC00879-201ENST00000462219 DUOX2Q9NRD8 1548 aa19.88■□□□□ 0.77
LINC00879-201ENST00000462219 RRP7BPQ9NSQ0 103 aa19.88■□□□□ 0.77
LINC00879-201ENST00000462219 ANKRD30AQ9BXX3 1397 aa19.87■□□□□ 0.77
LINC00879-201ENST00000462219 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
LINC00879-201ENST00000462219 PTPRMP28827 1452 aa19.86■□□□□ 0.77
LINC00879-201ENST00000462219 EIF2AK4Q9P2K8 1649 aaKnown RBP19.85■□□□□ 0.77
LINC00879-201ENST00000462219 KIF3BO15066 747 aa19.85■□□□□ 0.77
LINC00879-201ENST00000462219 ITGAEP38570 1179 aa19.84■□□□□ 0.77
LINC00879-201ENST00000462219 GGT6Q6P531 493 aa19.83■□□□□ 0.77
LINC00879-201ENST00000462219 RNF17Q9BXT8 1623 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms