RNA–Protein interactions for RNA: ENST00000462202.2

TRIM8-202, Transcript of tripartite motif containing 8, humanhuman

TSL 5

Gene TRIM8, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-202ENST00000462202 KDM4FA0A1W2PPD8 638 aa34.23■■■■□ 3.07
TRIM8-202ENST00000462202 ZNF777Q9ULD5 760 aaPredicted RBP34.21■■■■□ 3.07
TRIM8-202ENST00000462202 EHBP1L1Q8N3D4 1523 aa34.2■■■■□ 3.07
TRIM8-202ENST00000462202 PREX2Q70Z35 1606 aa34.2■■■■□ 3.07
TRIM8-202ENST00000462202 CCNB3Q8WWL7 1395 aa34.2■■■■□ 3.07
TRIM8-202ENST00000462202 RICTORQ6R327 1708 aa34.19■■■■□ 3.06
TRIM8-202ENST00000462202 POGZQ7Z3K3 1410 aa34.18■■■■□ 3.06
TRIM8-202ENST00000462202 CDC42BPBQ9Y5S2 1711 aa34.18■■■■□ 3.06
TRIM8-202ENST00000462202 MYT1LQ9UL68 1186 aa34.15■■■■□ 3.06
TRIM8-202ENST00000462202 TIAM1Q13009 1591 aa34.15■■■■□ 3.06
TRIM8-202ENST00000462202 CDC42BPAQ5VT25 1732 aa34.14■■■■□ 3.06
TRIM8-202ENST00000462202 GPATCH8Q9UKJ3 1502 aaKnown RBP34.14■■■■□ 3.06
TRIM8-202ENST00000462202 CFDP1Q9UEE9 299 aaPredicted RBP34.13■■■■□ 3.05
TRIM8-202ENST00000462202 ARID4BQ4LE39 1312 aaPredicted RBP34.12■■■■□ 3.05
TRIM8-202ENST00000462202 APLP2Q06481 763 aa34.11■■■■□ 3.05
TRIM8-202ENST00000462202 AFAP1Q8N556 730 aa34.09■■■■□ 3.05
TRIM8-202ENST00000462202 ZMYM4Q5VZL5 1548 aa34.09■■■■□ 3.05
TRIM8-202ENST00000462202 ZFYVE16Q7Z3T8 1539 aa34.08■■■■□ 3.05
TRIM8-202ENST00000462202 ZNF518AQ6AHZ1 1483 aa34.07■■■■□ 3.05
TRIM8-202ENST00000462202 ARHGEF40Q8TER5 1519 aa34.07■■■■□ 3.04
TRIM8-202ENST00000462202 YEATS2Q9ULM3 1422 aa34.06■■■■□ 3.04
TRIM8-202ENST00000462202 ABCC1P33527 1531 aa34.04■■■■□ 3.04
TRIM8-202ENST00000462202 MAGI2Q86UL8 1455 aa34.04■■■■□ 3.04
TRIM8-202ENST00000462202 LRRC9Q6ZRR7 1453 aa34.02■■■■□ 3.04
TRIM8-202ENST00000462202 SUPT6HQ7KZ85 1726 aaKnown RBP34.01■■■■□ 3.04
TRIM8-202ENST00000462202 NCOA2Q15596 1464 aa34.01■■■■□ 3.04
TRIM8-202ENST00000462202 ARHGEF12Q9NZN5 1544 aa34■■■■□ 3.03
TRIM8-202ENST00000462202 TRAPPC8Q9Y2L5 1435 aa34■■■■□ 3.03
TRIM8-202ENST00000462202 SAMD9LQ8IVG5 1584 aa33.99■■■■□ 3.03
TRIM8-202ENST00000462202 KANK4Q5T7N3 995 aaPredicted RBP33.99■■■■□ 3.03
TRIM8-202ENST00000462202 HNRNPMP52272 730 aaKnown RBP eCLIP33.98■■■■□ 3.03
TRIM8-202ENST00000462202 MAP3K1Q13233 1512 aa33.97■■■■□ 3.03
TRIM8-202ENST00000462202 ITSN2Q9NZM3 1697 aa33.96■■■■□ 3.03
TRIM8-202ENST00000462202 SYCP2Q9BX26 1530 aa33.95■■■■□ 3.03
TRIM8-202ENST00000462202 PLEKHH2Q8IVE3 1493 aa33.94■■■■□ 3.02
TRIM8-202ENST00000462202 KDM5CP41229 1560 aa33.94■■■■□ 3.02
TRIM8-202ENST00000462202 ZNF644Q9H582 1327 aaPredicted RBP33.93■■■■□ 3.02
TRIM8-202ENST00000462202 HECW2Q9P2P5 1572 aa33.91■■■■□ 3.02
TRIM8-202ENST00000462202 ATP10AO60312 1499 aa33.89■■■■□ 3.02
TRIM8-202ENST00000462202 MLECQ14165 292 aa33.88■■■■□ 3.01
TRIM8-202ENST00000462202 KIAA1107Q9UPP5 1409 aa33.87■■■■□ 3.01
TRIM8-202ENST00000462202 C9orf84Q5VXU9 1444 aa33.87■■■■□ 3.01
TRIM8-202ENST00000462202 SPAG9O60271 1321 aaKnown RBP33.86■■■■□ 3.01
TRIM8-202ENST00000462202 MLH3Q9UHC1 1453 aa33.85■■■■□ 3.01
TRIM8-202ENST00000462202 BCORL1Q5H9F3 1711 aa33.81■■■■□ 3
TRIM8-202ENST00000462202 DIP2CQ9Y2E4 1556 aa33.79■■■■□ 3
TRIM8-202ENST00000462202 CAMSAP2Q08AD1 1489 aa33.77■■■■□ 3
TRIM8-202ENST00000462202 ABCA6Q8N139 1617 aa33.77■■■■□ 3
TRIM8-202ENST00000462202 ADAMTSL3P82987 1691 aa33.77■■■■□ 3
TRIM8-202ENST00000462202 SIGLEC1Q9BZZ2 1709 aa33.76■■■■□ 3
TRIM8-202ENST00000462202 MADDQ8WXG6 1647 aa33.74■■■□□ 2.99
TRIM8-202ENST00000462202 KIDINS220Q9ULH0 1771 aa33.73■■■□□ 2.99
TRIM8-202ENST00000462202 MYOM3Q5VTT5 1437 aa33.72■■■□□ 2.99
TRIM8-202ENST00000462202 PLPPR3Q6T4P5 718 aa33.72■■■□□ 2.99
TRIM8-202ENST00000462202 MBD5Q9P267 1494 aa33.71■■■□□ 2.99
TRIM8-202ENST00000462202 ATP7AQ04656 1500 aa33.7■■■□□ 2.99
TRIM8-202ENST00000462202 PTPRMP28827 1452 aa33.69■■■□□ 2.98
TRIM8-202ENST00000462202 CCDC141Q6ZP82 1450 aa33.66■■■□□ 2.98
TRIM8-202ENST00000462202 RIMS1Q86UR5 1692 aaKnown RBP33.64■■■□□ 2.98
TRIM8-202ENST00000462202 REREQ9P2R6 1566 aa33.64■■■□□ 2.98
TRIM8-202ENST00000462202 INO80Q9ULG1 1556 aaPredicted RBP33.64■■■□□ 2.98
TRIM8-202ENST00000462202 MIA2Q96PC5 1412 aa33.64■■■□□ 2.98
TRIM8-202ENST00000462202 RSPH4AQ5TD94 716 aa33.64■■■□□ 2.98
TRIM8-202ENST00000462202 TSPY4P0CV99 314 aa33.61■■■□□ 2.97
TRIM8-202ENST00000462202 TSPY10P0CW01 314 aa33.61■■■□□ 2.97
TRIM8-202ENST00000462202 ESF1Q9H501 851 aaKnown RBP33.58■■■□□ 2.97
TRIM8-202ENST00000462202 A2MP01023 1474 aa33.57■■■□□ 2.97
TRIM8-202ENST00000462202 AGLP35573 1532 aa33.57■■■□□ 2.96
TRIM8-202ENST00000462202 FER1L4A9Z1Z3 1794 aa33.56■■■□□ 2.96
TRIM8-202ENST00000462202 ARHGEF5Q12774 1597 aa33.55■■■□□ 2.96
TRIM8-202ENST00000462202 RTEL1-TNFRSF6BF6WH68 1400 aa33.55■■■□□ 2.96
TRIM8-202ENST00000462202 PPARGC1BQ86YN6 1023 aaKnown RBP33.52■■■□□ 2.96
TRIM8-202ENST00000462202 FGD6Q6ZV73 1430 aa33.52■■■□□ 2.96
TRIM8-202ENST00000462202 PTPN23Q9H3S7 1636 aa33.5■■■□□ 2.95
TRIM8-202ENST00000462202 ADGBQ8N7X0 1667 aa33.48■■■□□ 2.95
TRIM8-202ENST00000462202 GGT6Q6P531 493 aa33.46■■■□□ 2.95
TRIM8-202ENST00000462202 CEBPAP49715 358 aaPredicted RBP33.45■■■□□ 2.95
TRIM8-202ENST00000462202 PLXNC1O60486 1568 aa33.45■■■□□ 2.95
TRIM8-202ENST00000462202 FAM50AQ14320 339 aaKnown RBP33.43■■■□□ 2.94
TRIM8-202ENST00000462202 DHX29Q7Z478 1369 aaKnown RBP33.43■■■□□ 2.94
TRIM8-202ENST00000462202 KIF3BO15066 747 aa33.39■■■□□ 2.94
TRIM8-202ENST00000462202 TCOF1Q13428 1488 aaKnown RBP33.37■■■□□ 2.93
TRIM8-202ENST00000462202 ABCC5O15440 1437 aa33.36■■■□□ 2.93
TRIM8-202ENST00000462202 MAST1Q9Y2H9 1570 aa33.36■■■□□ 2.93
TRIM8-202ENST00000462202 CNTLNQ9NXG0 1405 aa33.35■■■□□ 2.93
TRIM8-202ENST00000462202 DAPK1P53355 1430 aa33.34■■■□□ 2.93
TRIM8-202ENST00000462202 CHIC2Q9UKJ5 165 aa33.32■■■□□ 2.92
TRIM8-202ENST00000462202 DNMT1P26358 1616 aaKnown RBP33.29■■■□□ 2.92
TRIM8-202ENST00000462202 RRP7BPQ9NSQ0 103 aa33.29■■■□□ 2.92
TRIM8-202ENST00000462202 SHANK2Q9UPX8 1470 aa33.29■■■□□ 2.92
TRIM8-202ENST00000462202 CROCC2H7BZ55 1655 aa33.26■■■□□ 2.92
TRIM8-202ENST00000462202 KIF15Q9NS87 1388 aa33.25■■■□□ 2.91
TRIM8-202ENST00000462202 ZMYM3Q14202 1370 aa33.24■■■□□ 2.91
TRIM8-202ENST00000462202 C3P01024 1663 aa33.24■■■□□ 2.91
TRIM8-202ENST00000462202 PPP6R1Q9UPN7 881 aa33.24■■■□□ 2.91
TRIM8-202ENST00000462202 LMTK3Q96Q04 1460 aa33.24■■■□□ 2.91
TRIM8-202ENST00000462202 CLTCQ00610 1675 aaKnown RBP33.23■■■□□ 2.91
TRIM8-202ENST00000462202 HSPA2P54652 639 aa33.21■■■□□ 2.91
TRIM8-202ENST00000462202 ANKRD30AQ9BXX3 1397 aa33.21■■■□□ 2.91
TRIM8-202ENST00000462202 DUOX2Q9NRD8 1548 aa33.2■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms