RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
NPHP1-209ENST00000461707 ZCCHC11Q5TAX3 1644 aaKnown RBP11.15□□□□□ -0.62
NPHP1-209ENST00000461707 TEX14Q8IWB6 1497 aa11.15□□□□□ -0.62
NPHP1-209ENST00000461707 TTC37Q6PGP7 1564 aa11.13□□□□□ -0.63
NPHP1-209ENST00000461707 MROH1Q8NDA8 1641 aa11.12□□□□□ -0.63
NPHP1-209ENST00000461707 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
NPHP1-209ENST00000461707 ERCC6L2Q5T890 1561 aa11.1□□□□□ -0.63
NPHP1-209ENST00000461707 UACAQ9BZF9 1416 aa11.1□□□□□ -0.63
NPHP1-209ENST00000461707 EIF2AK4Q9P2K8 1649 aaKnown RBP11.1□□□□□ -0.63
NPHP1-209ENST00000461707 PZPP20742 1482 aa11.1□□□□□ -0.63
NPHP1-209ENST00000461707 TDRD9Q8NDG6 1382 aaKnown RBP11.09□□□□□ -0.63
NPHP1-209ENST00000461707 CEP152O94986 1710 aa11.09□□□□□ -0.63
NPHP1-209ENST00000461707 GPATCH8Q9UKJ3 1502 aaKnown RBP11.08□□□□□ -0.64
NPHP1-209ENST00000461707 SETD5Q9C0A6 1442 aa11.08□□□□□ -0.64
NPHP1-209ENST00000461707 ABCC2Q92887 1545 aa11.07□□□□□ -0.64
NPHP1-209ENST00000461707 ARHGEF12Q9NZN5 1544 aa11.07□□□□□ -0.64
NPHP1-209ENST00000461707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
NPHP1-209ENST00000461707 TRPM1Q7Z4N2 1603 aa11.07□□□□□ -0.64
NPHP1-209ENST00000461707 KDM5CP41229 1560 aa11.06□□□□□ -0.64
NPHP1-209ENST00000461707 RAB3GAP2Q9H2M9 1393 aa11.06□□□□□ -0.64
NPHP1-209ENST00000461707 ZC3H13Q5T200 1668 aaKnown RBP11.06□□□□□ -0.64
NPHP1-209ENST00000461707 KIAA1210Q9ULL0 1709 aa11.06□□□□□ -0.64
NPHP1-209ENST00000461707 ATP10AO60312 1499 aa11.06□□□□□ -0.64
NPHP1-209ENST00000461707 SPATA31E1Q6ZUB1 1445 aa11.04□□□□□ -0.64
NPHP1-209ENST00000461707 DAPK1P53355 1430 aa11.04□□□□□ -0.64
NPHP1-209ENST00000461707 APLP2Q06481 763 aa11.04□□□□□ -0.64
NPHP1-209ENST00000461707 ABCC5O15440 1437 aa11.04□□□□□ -0.64
NPHP1-209ENST00000461707 CAMSAP2Q08AD1 1489 aa11.04□□□□□ -0.64
NPHP1-209ENST00000461707 P3H3Q8IVL6 736 aa11.03□□□□□ -0.64
NPHP1-209ENST00000461707 ATP10BO94823 1461 aa11.03□□□□□ -0.64
NPHP1-209ENST00000461707 SPHKAPQ2M3C7 1700 aa11.03□□□□□ -0.64
NPHP1-209ENST00000461707 IQGAP1P46940 1657 aa11.02□□□□□ -0.64
NPHP1-209ENST00000461707 ABCC1P33527 1531 aa11.02□□□□□ -0.64
NPHP1-209ENST00000461707 TROQ12816 1431 aaPredicted RBP11.01□□□□□ -0.65
NPHP1-209ENST00000461707 MYO3AQ8NEV4 1616 aa11.01□□□□□ -0.65
NPHP1-209ENST00000461707 WDR7Q9Y4E6 1490 aa11.01□□□□□ -0.65
NPHP1-209ENST00000461707 SCAF1Q9H7N4 1312 aaKnown RBP11.01□□□□□ -0.65
NPHP1-209ENST00000461707 DIEXFQ68CQ4 756 aaKnown RBP11□□□□□ -0.65
NPHP1-209ENST00000461707 PPRC1Q5VV67 1664 aaKnown RBP11□□□□□ -0.65
NPHP1-209ENST00000461707 RPRD2Q5VT52 1461 aaKnown RBP10.98□□□□□ -0.65
NPHP1-209ENST00000461707 PLB1Q6P1J6 1458 aa10.98□□□□□ -0.65
NPHP1-209ENST00000461707 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
NPHP1-209ENST00000461707 ITGAEP38570 1179 aa10.98□□□□□ -0.65
NPHP1-209ENST00000461707 MYOM1P52179 1685 aa10.97□□□□□ -0.65
NPHP1-209ENST00000461707 PIK3C2BO00750 1634 aa10.97□□□□□ -0.65
NPHP1-209ENST00000461707 MAP3K4Q9Y6R4 1608 aa10.97□□□□□ -0.65
NPHP1-209ENST00000461707 PRDM15P57071 1507 aaPredicted RBP10.95□□□□□ -0.66
NPHP1-209ENST00000461707 ZFYVE16Q7Z3T8 1539 aa10.95□□□□□ -0.66
NPHP1-209ENST00000461707 TIMELESSQ9UNS1 1208 aa10.94□□□□□ -0.66
NPHP1-209ENST00000461707 NEUROD1Q13562 356 aa10.93□□□□□ -0.66
NPHP1-209ENST00000461707 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
NPHP1-209ENST00000461707 RICTORQ6R327 1708 aa10.93□□□□□ -0.66
NPHP1-209ENST00000461707 ABCA6Q8N139 1617 aa10.93□□□□□ -0.66
NPHP1-209ENST00000461707 ZNF518AQ6AHZ1 1483 aa10.93□□□□□ -0.66
NPHP1-209ENST00000461707 NCOA1Q15788 1441 aa10.92□□□□□ -0.66
NPHP1-209ENST00000461707 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
NPHP1-209ENST00000461707 DUOX2Q9NRD8 1548 aa10.92□□□□□ -0.66
NPHP1-209ENST00000461707 LMTK2Q8IWU2 1503 aa10.92□□□□□ -0.66
NPHP1-209ENST00000461707 TET3O43151 1660 aa10.91□□□□□ -0.66
NPHP1-209ENST00000461707 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
NPHP1-209ENST00000461707 FRMPD1Q5SYB0 1578 aa10.91□□□□□ -0.66
NPHP1-209ENST00000461707 MADDQ8WXG6 1647 aa10.91□□□□□ -0.66
NPHP1-209ENST00000461707 KIAA1107Q9UPP5 1409 aa10.89□□□□□ -0.67
NPHP1-209ENST00000461707 SETD1AO15047 1707 aaKnown RBP10.89□□□□□ -0.67
NPHP1-209ENST00000461707 ANKRD30BQ9BXX2 1392 aa10.89□□□□□ -0.67
NPHP1-209ENST00000461707 SIGLEC1Q9BZZ2 1709 aa10.89□□□□□ -0.67
NPHP1-209ENST00000461707 ERCC6Q03468 1493 aa10.89□□□□□ -0.67
NPHP1-209ENST00000461707 MROH2AA6NES4 1674 aa10.88□□□□□ -0.67
NPHP1-209ENST00000461707 MIER1Q8N108 512 aa10.87□□□□□ -0.67
NPHP1-209ENST00000461707 REREQ9P2R6 1566 aa10.87□□□□□ -0.67
NPHP1-209ENST00000461707 GLI2P10070 1586 aa10.87□□□□□ -0.67
NPHP1-209ENST00000461707 NRXN1Q9ULB1 1477 aa10.86□□□□□ -0.67
NPHP1-209ENST00000461707 CFAP74Q9C0B2 1584 aa10.86□□□□□ -0.67
NPHP1-209ENST00000461707 PLA2R1Q13018 1463 aa10.86□□□□□ -0.67
NPHP1-209ENST00000461707 PPLO60437 1756 aa10.86□□□□□ -0.67
NPHP1-209ENST00000461707 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
NPHP1-209ENST00000461707 YTHDC1Q96MU7 727 aaKnown RBP10.84□□□□□ -0.67
NPHP1-209ENST00000461707 TRPM2O94759 1503 aa10.83□□□□□ -0.68
NPHP1-209ENST00000461707 ACIN1Q9UKV3 1341 aaKnown RBP10.83□□□□□ -0.68
NPHP1-209ENST00000461707 ZMYM4Q5VZL5 1548 aa10.82□□□□□ -0.68
NPHP1-209ENST00000461707 RALGAPBQ86X10 1494 aa10.82□□□□□ -0.68
NPHP1-209ENST00000461707 FAM135AQ9P2D6 1515 aa10.82□□□□□ -0.68
NPHP1-209ENST00000461707 FAM50AQ14320 339 aaKnown RBP10.81□□□□□ -0.68
NPHP1-209ENST00000461707 SYCP2Q9BX26 1530 aa10.8□□□□□ -0.68
NPHP1-209ENST00000461707 USP32Q8NFA0 1604 aa10.8□□□□□ -0.68
NPHP1-209ENST00000461707 HECW2Q9P2P5 1572 aa10.8□□□□□ -0.68
NPHP1-209ENST00000461707 KDM5AP29375 1690 aaKnown RBP10.8□□□□□ -0.68
NPHP1-209ENST00000461707 CLTCL1P53675 1640 aa10.79□□□□□ -0.68
NPHP1-209ENST00000461707 PPP1R15AO75807 674 aaPredicted RBP10.79□□□□□ -0.68
NPHP1-209ENST00000461707 PTPRTO14522 1441 aa10.79□□□□□ -0.68
NPHP1-209ENST00000461707 ERBINQ96RT1 1412 aa10.79□□□□□ -0.68
NPHP1-209ENST00000461707 RTEL1-TNFRSF6BF6WH68 1400 aa10.78□□□□□ -0.68
NPHP1-209ENST00000461707 SIN3AQ96ST3 1273 aa10.77□□□□□ -0.68
NPHP1-209ENST00000461707 CCDC141Q6ZP82 1450 aa10.77□□□□□ -0.69
NPHP1-209ENST00000461707 SYNMO15061 1565 aa10.77□□□□□ -0.69
NPHP1-209ENST00000461707 CLTCQ00610 1675 aaKnown RBP10.77□□□□□ -0.69
NPHP1-209ENST00000461707 KIF13AQ9H1H9 1805 aa10.77□□□□□ -0.69
NPHP1-209ENST00000461707 ARID3CA6NKF2 412 aa10.76□□□□□ -0.69
NPHP1-209ENST00000461707 GTF3C3Q9Y5Q9 886 aa10.76□□□□□ -0.69
NPHP1-209ENST00000461707 GPRASP1Q5JY77 1395 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms