RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
CCT4-203ENST00000461540 SOX12O15370 315 aa12.74□□□□□ -0.37
CCT4-203ENST00000461540 HCSTQ9UBK5 93 aa12.74□□□□□ -0.37
CCT4-203ENST00000461540 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.373e-6■■■□□ 16.4
CCT4-203ENST00000461540 PBX2P40425 430 aa12.72□□□□□ -0.37
CCT4-203ENST00000461540 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
CCT4-203ENST00000461540 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
CCT4-203ENST00000461540 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
CCT4-203ENST00000461540 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
CCT4-203ENST00000461540 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
CCT4-203ENST00000461540 NUDT7P0C024 238 aa12.61□□□□□ -0.39
CCT4-203ENST00000461540 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
CCT4-203ENST00000461540 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
CCT4-203ENST00000461540 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
CCT4-203ENST00000461540 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.55□□□□□ -0.4
CCT4-203ENST00000461540 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
CCT4-203ENST00000461540 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
CCT4-203ENST00000461540 NLRP6P59044 892 aa12.52□□□□□ -0.41
CCT4-203ENST00000461540 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
CCT4-203ENST00000461540 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
CCT4-203ENST00000461540 PCDHGA4Q9Y5G9 962 aa12.5□□□□□ -0.41
CCT4-203ENST00000461540 C2orf72A6NCS6 295 aa12.48□□□□□ -0.41
CCT4-203ENST00000461540 KIF3CO14782 793 aa12.47□□□□□ -0.41
CCT4-203ENST00000461540 SLC34A2O95436 690 aa12.46□□□□□ -0.41
CCT4-203ENST00000461540 PSDA5PKW4 1024 aaPredicted RBP12.45□□□□□ -0.42
CCT4-203ENST00000461540 RNF25Q96BH1 459 aaPredicted RBP12.45□□□□□ -0.42
CCT4-203ENST00000461540 TK2O00142 265 aa12.43□□□□□ -0.42
CCT4-203ENST00000461540 FBXO22Q8NEZ5 403 aa12.43□□□□□ -0.42
CCT4-203ENST00000461540 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
CCT4-203ENST00000461540 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
CCT4-203ENST00000461540 HRO43593 1189 aa12.4□□□□□ -0.42
CCT4-203ENST00000461540 IRX2Q9BZI1 471 aaPredicted RBP12.39□□□□□ -0.43
CCT4-203ENST00000461540 RGS20O76081 388 aa12.38□□□□□ -0.43
CCT4-203ENST00000461540 TMC2Q8TDI7 906 aa12.37□□□□□ -0.43
CCT4-203ENST00000461540 PSEN2P49810 448 aa12.35□□□□□ -0.43
CCT4-203ENST00000461540 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
CCT4-203ENST00000461540 BCL11BQ9C0K0 894 aaPredicted RBP12.35□□□□□ -0.43
CCT4-203ENST00000461540 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
CCT4-203ENST00000461540 MFRPQ9BY79 579 aa12.32□□□□□ -0.44
CCT4-203ENST00000461540 STK24Q9Y6E0 443 aa12.31□□□□□ -0.44
CCT4-203ENST00000461540 PTPN5P54829 565 aa12.3□□□□□ -0.44
CCT4-203ENST00000461540 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.45
CCT4-203ENST00000461540 IFFO2Q5TF58 517 aa12.27□□□□□ -0.45
CCT4-203ENST00000461540 KCNH8Q96L42 1107 aa12.27□□□□□ -0.45
CCT4-203ENST00000461540 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
CCT4-203ENST00000461540 PTCD2Q8WV60 388 aaKnown RBP12.22□□□□□ -0.45
CCT4-203ENST00000461540 KCNK17Q96T54 332 aa12.21□□□□□ -0.45
CCT4-203ENST00000461540 A0A0G2JS52 829 aa12.2□□□□□ -0.46
CCT4-203ENST00000461540 STK25O00506 426 aa12.19□□□□□ -0.46
CCT4-203ENST00000461540 VPS9D1Q9Y2B5 631 aa12.17□□□□□ -0.46
CCT4-203ENST00000461540 TBC1D12O60347 775 aa12.14□□□□□ -0.47
CCT4-203ENST00000461540 THSD4Q6ZMP0 1018 aa12.13□□□□□ -0.47
CCT4-203ENST00000461540 GOLGA8CPA6NN73 597 aa12.12□□□□□ -0.47
CCT4-203ENST00000461540 Q6ZNB5 142 aa12.09□□□□□ -0.47
CCT4-203ENST00000461540 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
CCT4-203ENST00000461540 FOXK1P85037 733 aa12.08□□□□□ -0.48
CCT4-203ENST00000461540 WNT2BQ93097 391 aa12.07□□□□□ -0.48
CCT4-203ENST00000461540 SLC4A5Q9BY07 1137 aa12.06□□□□□ -0.48
CCT4-203ENST00000461540 PPP1R37O75864 691 aa12.05□□□□□ -0.48
CCT4-203ENST00000461540 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
CCT4-203ENST00000461540 BHMG1C9JSJ3 638 aaPredicted RBP12.02□□□□□ -0.49
CCT4-203ENST00000461540 ZNF454Q8N9F8 522 aa12.01□□□□□ -0.49
CCT4-203ENST00000461540 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
CCT4-203ENST00000461540 GPHNQ9NQX3 736 aaPredicted RBP12.01□□□□□ -0.49
CCT4-203ENST00000461540 PTPREP23469 700 aa11.98□□□□□ -0.49
CCT4-203ENST00000461540 DSG2Q14126 1118 aa11.97□□□□□ -0.49
CCT4-203ENST00000461540 NBPF3Q9H094 633 aa11.97□□□□□ -0.49
CCT4-203ENST00000461540 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
CCT4-203ENST00000461540 ECM2O94769 699 aaPredicted RBP11.93□□□□□ -0.5
CCT4-203ENST00000461540 ITGBL1O95965 494 aaPredicted RBP11.92□□□□□ -0.5
CCT4-203ENST00000461540 OXER1Q8TDS5 423 aa11.91□□□□□ -0.5
CCT4-203ENST00000461540 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCT4-203ENST00000461540 FOSBP53539 338 aa11.89□□□□□ -0.51
CCT4-203ENST00000461540 LAPTM4AQ15012 233 aa11.89□□□□□ -0.51
CCT4-203ENST00000461540 ANKK1Q8NFD2 765 aa11.87□□□□□ -0.51
CCT4-203ENST00000461540 RGL2O15211 777 aa11.82□□□□□ -0.52
CCT4-203ENST00000461540 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
CCT4-203ENST00000461540 KCNC4Q03721 635 aa11.81□□□□□ -0.52
CCT4-203ENST00000461540 TRAF7Q6Q0C0 670 aa11.81□□□□□ -0.52
CCT4-203ENST00000461540 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
CCT4-203ENST00000461540 NYAP1Q6ZVC0 841 aa11.8□□□□□ -0.52
CCT4-203ENST00000461540 ADAM33Q9BZ11 813 aa11.79□□□□□ -0.52
CCT4-203ENST00000461540 GFRA3O60609 400 aa11.78□□□□□ -0.52
CCT4-203ENST00000461540 BCAMP50895 628 aa11.78□□□□□ -0.52
CCT4-203ENST00000461540 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
CCT4-203ENST00000461540 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
CCT4-203ENST00000461540 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
CCT4-203ENST00000461540 LCE2BO14633 110 aa11.74□□□□□ -0.53
CCT4-203ENST00000461540 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
CCT4-203ENST00000461540 EVI5O60447 810 aa11.72□□□□□ -0.53
CCT4-203ENST00000461540 PPP1R15BQ5SWA1 713 aa11.72□□□□□ -0.53
CCT4-203ENST00000461540 LAPTM4BQ86VI4 370 aa11.72□□□□□ -0.53
CCT4-203ENST00000461540 PROX2Q3B8N5 592 aa11.71□□□□□ -0.53
CCT4-203ENST00000461540 WBP1LQ9NX94 342 aa11.71□□□□□ -0.53
CCT4-203ENST00000461540 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
CCT4-203ENST00000461540 PKD2Q13563 968 aa11.67□□□□□ -0.54
CCT4-203ENST00000461540 CRISPLD2Q9H0B8 497 aa11.67□□□□□ -0.54
CCT4-203ENST00000461540 NRG2O14511 850 aaPredicted RBP11.64□□□□□ -0.55
CCT4-203ENST00000461540 COL9A1P20849 921 aa11.62□□□□□ -0.55
CCT4-203ENST00000461540 KIAA1468Q9P260 1216 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms