RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 ZFYVE16Q7Z3T8 1539 aa28.7■■■□□ 2.19
COL1A2-202ENST00000461525 ADAMTSL3P82987 1691 aa28.7■■■□□ 2.18
COL1A2-202ENST00000461525 YEATS2Q9ULM3 1422 aa28.69■■■□□ 2.18
COL1A2-202ENST00000461525 MYO5CQ9NQX4 1742 aa28.69■■■□□ 2.18
COL1A2-202ENST00000461525 PTPRMP28827 1452 aa28.68■■■□□ 2.18
COL1A2-202ENST00000461525 FYCO1Q9BQS8 1478 aa28.68■■■□□ 2.18
COL1A2-202ENST00000461525 LRRIQ1Q96JM4 1722 aa28.68■■■□□ 2.18
COL1A2-202ENST00000461525 ARHGAP5Q13017 1502 aa28.67■■■□□ 2.18
COL1A2-202ENST00000461525 BCORL1Q5H9F3 1711 aa28.66■■■□□ 2.18
COL1A2-202ENST00000461525 MADDQ8WXG6 1647 aa28.6■■■□□ 2.17
COL1A2-202ENST00000461525 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
COL1A2-202ENST00000461525 ATP10AO60312 1499 aa28.54■■■□□ 2.16
COL1A2-202ENST00000461525 AFAP1Q8N556 730 aa28.54■■■□□ 2.16
COL1A2-202ENST00000461525 C9orf84Q5VXU9 1444 aa28.52■■■□□ 2.16
COL1A2-202ENST00000461525 PREX2Q70Z35 1606 aa28.52■■■□□ 2.16
COL1A2-202ENST00000461525 MLECQ14165 292 aa28.52■■■□□ 2.16
COL1A2-202ENST00000461525 KDM5CP41229 1560 aa28.5■■■□□ 2.15
COL1A2-202ENST00000461525 MYT1LQ9UL68 1186 aa28.5■■■□□ 2.15
COL1A2-202ENST00000461525 SIGLEC1Q9BZZ2 1709 aa28.49■■■□□ 2.15
COL1A2-202ENST00000461525 CDC42BPBQ9Y5S2 1711 aa28.49■■■□□ 2.15
COL1A2-202ENST00000461525 RIMS1Q86UR5 1692 aaKnown RBP28.48■■■□□ 2.15
COL1A2-202ENST00000461525 ABCC1P33527 1531 aa28.47■■■□□ 2.15
COL1A2-202ENST00000461525 CEP162Q5TB80 1403 aa28.46■■■□□ 2.15
COL1A2-202ENST00000461525 TRAPPC8Q9Y2L5 1435 aa28.44■■■□□ 2.14
COL1A2-202ENST00000461525 ARHGEF12Q9NZN5 1544 aa28.44■■■□□ 2.14
COL1A2-202ENST00000461525 MTUS2Q5JR59 1369 aa28.43■■■□□ 2.14
COL1A2-202ENST00000461525 PLPPR3Q6T4P5 718 aa28.43■■■□□ 2.14
COL1A2-202ENST00000461525 MLH3Q9UHC1 1453 aa28.42■■■□□ 2.14
COL1A2-202ENST00000461525 ZNF777Q9ULD5 760 aaPredicted RBP28.41■■■□□ 2.14
COL1A2-202ENST00000461525 GPATCH8Q9UKJ3 1502 aaKnown RBP28.41■■■□□ 2.14
COL1A2-202ENST00000461525 CDC42BPAQ5VT25 1732 aa28.39■■■□□ 2.14
COL1A2-202ENST00000461525 DIP2CQ9Y2E4 1556 aa28.38■■■□□ 2.13
COL1A2-202ENST00000461525 LMTK3Q96Q04 1460 aa28.38■■■□□ 2.13
COL1A2-202ENST00000461525 CCNB3Q8WWL7 1395 aa28.37■■■□□ 2.13
COL1A2-202ENST00000461525 ITSN2Q9NZM3 1697 aa28.36■■■□□ 2.13
COL1A2-202ENST00000461525 CFDP1Q9UEE9 299 aaPredicted RBP28.35■■■□□ 2.13
COL1A2-202ENST00000461525 REREQ9P2R6 1566 aa28.34■■■□□ 2.13
COL1A2-202ENST00000461525 FER1L4A9Z1Z3 1794 aa28.34■■■□□ 2.13
COL1A2-202ENST00000461525 SAMD9LQ8IVG5 1584 aa28.33■■■□□ 2.12
COL1A2-202ENST00000461525 ABCA6Q8N139 1617 aa28.32■■■□□ 2.12
COL1A2-202ENST00000461525 SYCP2Q9BX26 1530 aa28.31■■■□□ 2.12
COL1A2-202ENST00000461525 EHBP1L1Q8N3D4 1523 aa28.3■■■□□ 2.12
COL1A2-202ENST00000461525 ILDR1Q86SU0 546 aaPredicted RBP28.3■■■□□ 2.12
COL1A2-202ENST00000461525 PLEKHH2Q8IVE3 1493 aa28.29■■■□□ 2.12
COL1A2-202ENST00000461525 HNRNPMP52272 730 aaKnown RBP eCLIP28.29■■■□□ 2.12
COL1A2-202ENST00000461525 KIAA1107Q9UPP5 1409 aa28.28■■■□□ 2.12
COL1A2-202ENST00000461525 SPAG9O60271 1321 aaKnown RBP28.27■■■□□ 2.12
COL1A2-202ENST00000461525 AGLP35573 1532 aa28.27■■■□□ 2.12
COL1A2-202ENST00000461525 LOC105371045A0A1W2PR82 267 aa28.25■■■□□ 2.11
COL1A2-202ENST00000461525 HSPA2P54652 639 aa28.25■■■□□ 2.11
COL1A2-202ENST00000461525 KIDINS220Q9ULH0 1771 aa28.24■■■□□ 2.11
COL1A2-202ENST00000461525 CEBPAP49715 358 aaPredicted RBP28.24■■■□□ 2.11
COL1A2-202ENST00000461525 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
COL1A2-202ENST00000461525 ESF1Q9H501 851 aaKnown RBP28.21■■■□□ 2.11
COL1A2-202ENST00000461525 ATP7AQ04656 1500 aa28.17■■■□□ 2.1
COL1A2-202ENST00000461525 VPS8Q8N3P4 1428 aa28.17■■■□□ 2.1
COL1A2-202ENST00000461525 ZNF644Q9H582 1327 aaPredicted RBP28.17■■■□□ 2.1
COL1A2-202ENST00000461525 NCOA2Q15596 1464 aa28.13■■■□□ 2.09
COL1A2-202ENST00000461525 INO80Q9ULG1 1556 aaPredicted RBP28.12■■■□□ 2.09
COL1A2-202ENST00000461525 CNTLNQ9NXG0 1405 aa28.12■■■□□ 2.09
COL1A2-202ENST00000461525 MBD5Q9P267 1494 aa28.1■■■□□ 2.09
COL1A2-202ENST00000461525 UHRF1BP1Q6BDS2 1440 aa28.09■■■□□ 2.09
COL1A2-202ENST00000461525 A2MP01023 1474 aa28.09■■■□□ 2.09
COL1A2-202ENST00000461525 PREX1Q8TCU6 1659 aa28.08■■■□□ 2.09
COL1A2-202ENST00000461525 SUPT6HQ7KZ85 1726 aaKnown RBP28.08■■■□□ 2.09
COL1A2-202ENST00000461525 PLXNC1O60486 1568 aa28.06■■■□□ 2.08
COL1A2-202ENST00000461525 LRRC9Q6ZRR7 1453 aa28.03■■■□□ 2.08
COL1A2-202ENST00000461525 RTEL1-TNFRSF6BF6WH68 1400 aa28.03■■■□□ 2.08
COL1A2-202ENST00000461525 C3P01024 1663 aa28.03■■■□□ 2.08
COL1A2-202ENST00000461525 CAMSAP2Q08AD1 1489 aa28.02■■■□□ 2.08
COL1A2-202ENST00000461525 CCDC141Q6ZP82 1450 aa28.01■■■□□ 2.07
COL1A2-202ENST00000461525 FBXO41Q8TF61 875 aa28■■■□□ 2.07
COL1A2-202ENST00000461525 GGT6Q6P531 493 aa27.99■■■□□ 2.07
COL1A2-202ENST00000461525 RSPH4AQ5TD94 716 aa27.98■■■□□ 2.07
COL1A2-202ENST00000461525 ZMYM3Q14202 1370 aa27.98■■■□□ 2.07
COL1A2-202ENST00000461525 SETD1BQ9UPS6 1966 aaKnown RBP27.96■■■□□ 2.07
COL1A2-202ENST00000461525 MAP3K1Q13233 1512 aa27.96■■■□□ 2.07
COL1A2-202ENST00000461525 NPATQ14207 1427 aa27.95■■■□□ 2.07
COL1A2-202ENST00000461525 ADGBQ8N7X0 1667 aa27.95■■■□□ 2.07
COL1A2-202ENST00000461525 KANK4Q5T7N3 995 aaPredicted RBP27.94■■■□□ 2.06
COL1A2-202ENST00000461525 DHX29Q7Z478 1369 aaKnown RBP27.94■■■□□ 2.06
COL1A2-202ENST00000461525 MROH2AA6NES4 1674 aa27.94■■■□□ 2.06
COL1A2-202ENST00000461525 PPP6R1Q9UPN7 881 aa27.93■■■□□ 2.06
COL1A2-202ENST00000461525 DMRT2Q9Y5R5 561 aa27.92■■■□□ 2.06
COL1A2-202ENST00000461525 TSPY4P0CV99 314 aa27.89■■■□□ 2.06
COL1A2-202ENST00000461525 TSPY10P0CW01 314 aa27.89■■■□□ 2.06
COL1A2-202ENST00000461525 ARHGEF5Q12774 1597 aa27.88■■■□□ 2.05
COL1A2-202ENST00000461525 CLTCQ00610 1675 aaKnown RBP27.87■■■□□ 2.05
COL1A2-202ENST00000461525 KIF3BO15066 747 aa27.86■■■□□ 2.05
COL1A2-202ENST00000461525 APLP2Q06481 763 aa27.85■■■□□ 2.05
COL1A2-202ENST00000461525 MYOM3Q5VTT5 1437 aa27.84■■■□□ 2.05
COL1A2-202ENST00000461525 PTPRKQ15262 1439 aa27.84■■■□□ 2.05
COL1A2-202ENST00000461525 MIA2Q96PC5 1412 aa27.84■■■□□ 2.05
COL1A2-202ENST00000461525 CERKQ8TCT0 537 aa27.83■■■□□ 2.05
COL1A2-202ENST00000461525 STRCQ7RTU9 1775 aa27.82■■■□□ 2.04
COL1A2-202ENST00000461525 PTPRTO14522 1441 aa27.8■■■□□ 2.04
COL1A2-202ENST00000461525 NCOA1Q15788 1441 aa27.8■■■□□ 2.04
COL1A2-202ENST00000461525 KDM5DQ9BY66 1539 aa27.75■■■□□ 2.03
COL1A2-202ENST00000461525 FAM135AQ9P2D6 1515 aa27.75■■■□□ 2.03
COL1A2-202ENST00000461525 WASHC2CQ9Y4E1 1318 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms