RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 ARHGAP5Q13017 1502 aa16.08■□□□□ 0.16
SYN3-206ENST00000461446 POGZQ7Z3K3 1410 aa16.05■□□□□ 0.16
SYN3-206ENST00000461446 ARID4BQ4LE39 1312 aaPredicted RBP16.05■□□□□ 0.16
SYN3-206ENST00000461446 YEATS2Q9ULM3 1422 aa16.04■□□□□ 0.16
SYN3-206ENST00000461446 CDC42BPBQ9Y5S2 1711 aa16.04■□□□□ 0.16
SYN3-206ENST00000461446 AFAP1Q8N556 730 aa16.03■□□□□ 0.16
SYN3-206ENST00000461446 ZMYM4Q5VZL5 1548 aa16.03■□□□□ 0.16
SYN3-206ENST00000461446 ARHGEF40Q8TER5 1519 aa16.03■□□□□ 0.16
SYN3-206ENST00000461446 MTUS2Q5JR59 1369 aa16.01■□□□□ 0.15
SYN3-206ENST00000461446 PREX2Q70Z35 1606 aa16.01■□□□□ 0.15
SYN3-206ENST00000461446 ZFYVE16Q7Z3T8 1539 aa16.01■□□□□ 0.15
SYN3-206ENST00000461446 CDC42BPAQ5VT25 1732 aa16■□□□□ 0.15
SYN3-206ENST00000461446 ZNF777Q9ULD5 760 aaPredicted RBP16■□□□□ 0.15
SYN3-206ENST00000461446 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
SYN3-206ENST00000461446 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
SYN3-206ENST00000461446 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
SYN3-206ENST00000461446 TRAPPC8Q9Y2L5 1435 aa15.97■□□□□ 0.15
SYN3-206ENST00000461446 MYT1LQ9UL68 1186 aa15.97■□□□□ 0.15
SYN3-206ENST00000461446 ZNF518AQ6AHZ1 1483 aa15.97■□□□□ 0.15
SYN3-206ENST00000461446 SIGLEC1Q9BZZ2 1709 aa15.97■□□□□ 0.15
SYN3-206ENST00000461446 ADAMTSL3P82987 1691 aa15.96■□□□□ 0.15
SYN3-206ENST00000461446 ABCC1P33527 1531 aa15.96■□□□□ 0.15
SYN3-206ENST00000461446 CCNB3Q8WWL7 1395 aa15.96■□□□□ 0.15
SYN3-206ENST00000461446 BCORL1Q5H9F3 1711 aa15.96■□□□□ 0.15
SYN3-206ENST00000461446 MLECQ14165 292 aa15.95■□□□□ 0.14
SYN3-206ENST00000461446 CFDP1Q9UEE9 299 aaPredicted RBP15.95■□□□□ 0.14
SYN3-206ENST00000461446 ATP10AO60312 1499 aa15.94■□□□□ 0.14
SYN3-206ENST00000461446 KDM5CP41229 1560 aa15.94■□□□□ 0.14
SYN3-206ENST00000461446 SAMD9LQ8IVG5 1584 aa15.93■□□□□ 0.14
SYN3-206ENST00000461446 HNRNPMP52272 730 aaKnown RBP eCLIP15.93■□□□□ 0.14
SYN3-206ENST00000461446 EHBP1L1Q8N3D4 1523 aa15.93■□□□□ 0.14
SYN3-206ENST00000461446 PTPRMP28827 1452 aa15.92■□□□□ 0.14
SYN3-206ENST00000461446 APLP2Q06481 763 aa15.92■□□□□ 0.14
SYN3-206ENST00000461446 MADDQ8WXG6 1647 aa15.92■□□□□ 0.14
SYN3-206ENST00000461446 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
SYN3-206ENST00000461446 ITSN2Q9NZM3 1697 aa15.92■□□□□ 0.14
SYN3-206ENST00000461446 ZNF644Q9H582 1327 aaPredicted RBP15.92■□□□□ 0.14
SYN3-206ENST00000461446 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
SYN3-206ENST00000461446 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
SYN3-206ENST00000461446 SYCP2Q9BX26 1530 aa15.9■□□□□ 0.14
SYN3-206ENST00000461446 HECW2Q9P2P5 1572 aa15.9■□□□□ 0.14
SYN3-206ENST00000461446 MLH3Q9UHC1 1453 aa15.9■□□□□ 0.14
SYN3-206ENST00000461446 PLPPR3Q6T4P5 718 aa15.89■□□□□ 0.13
SYN3-206ENST00000461446 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
SYN3-206ENST00000461446 NCOA2Q15596 1464 aa15.88■□□□□ 0.13
SYN3-206ENST00000461446 DIP2CQ9Y2E4 1556 aa15.87■□□□□ 0.13
SYN3-206ENST00000461446 RIMS1Q86UR5 1692 aaKnown RBP15.87■□□□□ 0.13
SYN3-206ENST00000461446 ABCA6Q8N139 1617 aa15.86■□□□□ 0.13
SYN3-206ENST00000461446 KIAA1107Q9UPP5 1409 aa15.86■□□□□ 0.13
SYN3-206ENST00000461446 LRRC9Q6ZRR7 1453 aa15.86■□□□□ 0.13
SYN3-206ENST00000461446 KIDINS220Q9ULH0 1771 aa15.85■□□□□ 0.13
SYN3-206ENST00000461446 SPAG9O60271 1321 aaKnown RBP15.85■□□□□ 0.13
SYN3-206ENST00000461446 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
SYN3-206ENST00000461446 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
SYN3-206ENST00000461446 MBD5Q9P267 1494 aa15.81■□□□□ 0.12
SYN3-206ENST00000461446 FER1L4A9Z1Z3 1794 aa15.8■□□□□ 0.12
SYN3-206ENST00000461446 REREQ9P2R6 1566 aa15.8■□□□□ 0.12
SYN3-206ENST00000461446 CEBPAP49715 358 aaPredicted RBP15.79■□□□□ 0.12
SYN3-206ENST00000461446 ATP7AQ04656 1500 aa15.78■□□□□ 0.12
SYN3-206ENST00000461446 AGLP35573 1532 aa15.78■□□□□ 0.12
SYN3-206ENST00000461446 CAMSAP2Q08AD1 1489 aa15.78■□□□□ 0.12
SYN3-206ENST00000461446 INO80Q9ULG1 1556 aaPredicted RBP15.77■□□□□ 0.11
SYN3-206ENST00000461446 A2MP01023 1474 aa15.74■□□□□ 0.11
SYN3-206ENST00000461446 LMTK3Q96Q04 1460 aa15.74■□□□□ 0.11
SYN3-206ENST00000461446 HSPA2P54652 639 aa15.73■□□□□ 0.11
SYN3-206ENST00000461446 CCDC141Q6ZP82 1450 aa15.72■□□□□ 0.11
SYN3-206ENST00000461446 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
SYN3-206ENST00000461446 MYOM3Q5VTT5 1437 aa15.71■□□□□ 0.11
SYN3-206ENST00000461446 RSPH4AQ5TD94 716 aa15.71■□□□□ 0.11
SYN3-206ENST00000461446 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
SYN3-206ENST00000461446 PLXNC1O60486 1568 aa15.7■□□□□ 0.1
SYN3-206ENST00000461446 RTEL1-TNFRSF6BF6WH68 1400 aa15.7■□□□□ 0.1
SYN3-206ENST00000461446 GGT6Q6P531 493 aa15.7■□□□□ 0.1
SYN3-206ENST00000461446 ARHGEF5Q12774 1597 aa15.68■□□□□ 0.1
SYN3-206ENST00000461446 TSPY4P0CV99 314 aa15.68■□□□□ 0.1
SYN3-206ENST00000461446 TSPY10P0CW01 314 aa15.68■□□□□ 0.1
SYN3-206ENST00000461446 MIA2Q96PC5 1412 aa15.68■□□□□ 0.1
SYN3-206ENST00000461446 ADGBQ8N7X0 1667 aa15.67■□□□□ 0.1
SYN3-206ENST00000461446 C3P01024 1663 aa15.67■□□□□ 0.1
SYN3-206ENST00000461446 DHX29Q7Z478 1369 aaKnown RBP15.66■□□□□ 0.1
SYN3-206ENST00000461446 ZMYM3Q14202 1370 aa15.65■□□□□ 0.1
SYN3-206ENST00000461446 KIF3BO15066 747 aa15.65■□□□□ 0.1
SYN3-206ENST00000461446 CNTLNQ9NXG0 1405 aa15.65■□□□□ 0.1
SYN3-206ENST00000461446 CLTCQ00610 1675 aaKnown RBP15.62■□□□□ 0.09
SYN3-206ENST00000461446 SETD1BQ9UPS6 1966 aaKnown RBP15.62■□□□□ 0.09
SYN3-206ENST00000461446 PTPN23Q9H3S7 1636 aa15.61■□□□□ 0.09
SYN3-206ENST00000461446 FGD6Q6ZV73 1430 aa15.61■□□□□ 0.09
SYN3-206ENST00000461446 PREX1Q8TCU6 1659 aa15.61■□□□□ 0.09
SYN3-206ENST00000461446 UHRF1BP1Q6BDS2 1440 aa15.6■□□□□ 0.09
SYN3-206ENST00000461446 ABCC5O15440 1437 aa15.6■□□□□ 0.09
SYN3-206ENST00000461446 MAST1Q9Y2H9 1570 aa15.59■□□□□ 0.09
SYN3-206ENST00000461446 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
SYN3-206ENST00000461446 MROH2AA6NES4 1674 aa15.58■□□□□ 0.08
SYN3-206ENST00000461446 TCOF1Q13428 1488 aaKnown RBP15.57■□□□□ 0.08
SYN3-206ENST00000461446 RRP7BPQ9NSQ0 103 aa15.56■□□□□ 0.08
SYN3-206ENST00000461446 NPATQ14207 1427 aa15.56■□□□□ 0.08
SYN3-206ENST00000461446 PTPRKQ15262 1439 aa15.56■□□□□ 0.08
SYN3-206ENST00000461446 DAPK1P53355 1430 aa15.55■□□□□ 0.08
SYN3-206ENST00000461446 WASHC2CQ9Y4E1 1318 aa15.55■□□□□ 0.08
SYN3-206ENST00000461446 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms