RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 PPARGC1BQ86YN6 1023 aaKnown RBP17.57■□□□□ 0.4
SSBP1-202ENST00000461433 NEO1Q92859 1461 aa17.57■□□□□ 0.4
SSBP1-202ENST00000461433 ARHGAP5Q13017 1502 aa17.56■□□□□ 0.4
SSBP1-202ENST00000461433 ITSN2Q9NZM3 1697 aa17.56■□□□□ 0.4
SSBP1-202ENST00000461433 CFAP74Q9C0B2 1584 aa17.55■□□□□ 0.4
SSBP1-202ENST00000461433 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
SSBP1-202ENST00000461433 AKNAQ7Z591 1439 aa17.54■□□□□ 0.4
SSBP1-202ENST00000461433 COL17A1Q9UMD9 1497 aaPredicted RBP17.54■□□□□ 0.4
SSBP1-202ENST00000461433 PHLDB1Q86UU1 1377 aa17.54■□□□□ 0.4
SSBP1-202ENST00000461433 CFDP1Q9UEE9 299 aaPredicted RBP17.52■□□□□ 0.4
SSBP1-202ENST00000461433 SAMD9LQ8IVG5 1584 aa17.52■□□□□ 0.4
SSBP1-202ENST00000461433 MYOM3Q5VTT5 1437 aa17.52■□□□□ 0.39
SSBP1-202ENST00000461433 KDM6BO15054 1643 aa17.5■□□□□ 0.39
SSBP1-202ENST00000461433 ZNF644Q9H582 1327 aaPredicted RBP17.48■□□□□ 0.39
SSBP1-202ENST00000461433 ADGRL1O94910 1474 aa17.48■□□□□ 0.39
SSBP1-202ENST00000461433 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
SSBP1-202ENST00000461433 ZNF777Q9ULD5 760 aaPredicted RBP17.48■□□□□ 0.39
SSBP1-202ENST00000461433 MIA2Q96PC5 1412 aa17.48■□□□□ 0.39
SSBP1-202ENST00000461433 ABCC1P33527 1531 aa17.48■□□□□ 0.39
SSBP1-202ENST00000461433 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
SSBP1-202ENST00000461433 RICTORQ6R327 1708 aa17.46■□□□□ 0.39
SSBP1-202ENST00000461433 FRMPD1Q5SYB0 1578 aa17.46■□□□□ 0.39
SSBP1-202ENST00000461433 FGD6Q6ZV73 1430 aa17.45■□□□□ 0.38
SSBP1-202ENST00000461433 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
SSBP1-202ENST00000461433 DENND4BO75064 1496 aaPredicted RBP17.44■□□□□ 0.38
SSBP1-202ENST00000461433 CAMSAP2Q08AD1 1489 aa17.44■□□□□ 0.38
SSBP1-202ENST00000461433 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
SSBP1-202ENST00000461433 RAPGEF3O95398 923 aa17.44■□□□□ 0.38
SSBP1-202ENST00000461433 SYCP2Q9BX26 1530 aa17.43■□□□□ 0.38
SSBP1-202ENST00000461433 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
SSBP1-202ENST00000461433 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.38
SSBP1-202ENST00000461433 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
SSBP1-202ENST00000461433 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
SSBP1-202ENST00000461433 MBD5Q9P267 1494 aa17.42■□□□□ 0.38
SSBP1-202ENST00000461433 TRAPPC8Q9Y2L5 1435 aa17.41■□□□□ 0.38
SSBP1-202ENST00000461433 TCOF1Q13428 1488 aaKnown RBP17.41■□□□□ 0.38
SSBP1-202ENST00000461433 AFAP1Q8N556 730 aa17.4■□□□□ 0.38
SSBP1-202ENST00000461433 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
SSBP1-202ENST00000461433 KDM5CP41229 1560 aa17.38■□□□□ 0.37
SSBP1-202ENST00000461433 ZMYM4Q5VZL5 1548 aa17.37■□□□□ 0.37
SSBP1-202ENST00000461433 ARHGEF5Q12774 1597 aa17.36■□□□□ 0.37
SSBP1-202ENST00000461433 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
SSBP1-202ENST00000461433 RSPH4AQ5TD94 716 aa17.32■□□□□ 0.36
SSBP1-202ENST00000461433 CCDC141Q6ZP82 1450 aa17.32■□□□□ 0.36
SSBP1-202ENST00000461433 MLH3Q9UHC1 1453 aa17.32■□□□□ 0.36
SSBP1-202ENST00000461433 KIDINS220Q9ULH0 1771 aa17.32■□□□□ 0.36
SSBP1-202ENST00000461433 HECW2Q9P2P5 1572 aa17.32■□□□□ 0.36
SSBP1-202ENST00000461433 DNMT1P26358 1616 aaKnown RBP17.31■□□□□ 0.36
SSBP1-202ENST00000461433 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
SSBP1-202ENST00000461433 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
SSBP1-202ENST00000461433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSBP1-202ENST00000461433 ABCC5O15440 1437 aa17.31■□□□□ 0.36
SSBP1-202ENST00000461433 YEATS2Q9ULM3 1422 aa17.31■□□□□ 0.36
SSBP1-202ENST00000461433 INO80Q9ULG1 1556 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-202ENST00000461433 CROCC2H7BZ55 1655 aa17.3■□□□□ 0.36
SSBP1-202ENST00000461433 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
SSBP1-202ENST00000461433 DAPK1P53355 1430 aa17.29■□□□□ 0.36
SSBP1-202ENST00000461433 ZFYVE16Q7Z3T8 1539 aa17.28■□□□□ 0.36
SSBP1-202ENST00000461433 MAST1Q9Y2H9 1570 aa17.27■□□□□ 0.36
SSBP1-202ENST00000461433 ATP7AQ04656 1500 aa17.27■□□□□ 0.36
SSBP1-202ENST00000461433 ARHGEF40Q8TER5 1519 aa17.27■□□□□ 0.36
SSBP1-202ENST00000461433 ABCA6Q8N139 1617 aa17.27■□□□□ 0.35
SSBP1-202ENST00000461433 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.35
SSBP1-202ENST00000461433 DIP2CQ9Y2E4 1556 aa17.25■□□□□ 0.35
SSBP1-202ENST00000461433 PTPRKQ15262 1439 aa17.25■□□□□ 0.35
SSBP1-202ENST00000461433 TSPY4P0CV99 314 aa17.25■□□□□ 0.35
SSBP1-202ENST00000461433 TSPY10P0CW01 314 aa17.25■□□□□ 0.35
SSBP1-202ENST00000461433 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
SSBP1-202ENST00000461433 C9orf84Q5VXU9 1444 aa17.24■□□□□ 0.35
SSBP1-202ENST00000461433 SIGLEC1Q9BZZ2 1709 aa17.23■□□□□ 0.35
SSBP1-202ENST00000461433 ATP10AO60312 1499 aa17.23■□□□□ 0.35
SSBP1-202ENST00000461433 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
SSBP1-202ENST00000461433 ADGBQ8N7X0 1667 aa17.21■□□□□ 0.35
SSBP1-202ENST00000461433 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
SSBP1-202ENST00000461433 PLXNC1O60486 1568 aa17.2■□□□□ 0.34
SSBP1-202ENST00000461433 CHIC2Q9UKJ5 165 aa17.2■□□□□ 0.34
SSBP1-202ENST00000461433 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
SSBP1-202ENST00000461433 ADGRL2O95490 1459 aa17.19■□□□□ 0.34
SSBP1-202ENST00000461433 ITGAEP38570 1179 aa17.18■□□□□ 0.34
SSBP1-202ENST00000461433 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
SSBP1-202ENST00000461433 A2MP01023 1474 aa17.16■□□□□ 0.34
SSBP1-202ENST00000461433 DHX29Q7Z478 1369 aaKnown RBP17.14■□□□□ 0.34
SSBP1-202ENST00000461433 ANKRD30AQ9BXX3 1397 aa17.14■□□□□ 0.34
SSBP1-202ENST00000461433 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
SSBP1-202ENST00000461433 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
SSBP1-202ENST00000461433 AGLP35573 1532 aa17.13■□□□□ 0.33
SSBP1-202ENST00000461433 KIF15Q9NS87 1388 aa17.13■□□□□ 0.33
SSBP1-202ENST00000461433 DUOX2Q9NRD8 1548 aa17.12■□□□□ 0.33
SSBP1-202ENST00000461433 BCORL1Q5H9F3 1711 aa17.1■□□□□ 0.33
SSBP1-202ENST00000461433 ARID4BQ4LE39 1312 aaPredicted RBP17.09■□□□□ 0.33
SSBP1-202ENST00000461433 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
SSBP1-202ENST00000461433 ERBINQ96RT1 1412 aa17.06■□□□□ 0.32
SSBP1-202ENST00000461433 ADAMTSL3P82987 1691 aa17.05■□□□□ 0.32
SSBP1-202ENST00000461433 KIF3BO15066 747 aa17.05■□□□□ 0.32
SSBP1-202ENST00000461433 NAIPQ13075 1403 aa17.05■□□□□ 0.32
SSBP1-202ENST00000461433 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
SSBP1-202ENST00000461433 GCC2Q8IWJ2 1684 aa17.04■□□□□ 0.32
SSBP1-202ENST00000461433 MLECQ14165 292 aa17.04■□□□□ 0.32
SSBP1-202ENST00000461433 HFM1A2PYH4 1435 aa17.03■□□□□ 0.32
SSBP1-202ENST00000461433 KDM4FA0A1W2PPD8 638 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms