RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 WDR7Q9Y4E6 1490 aa11.05□□□□□ -0.64
LSG1-205ENST00000461343 HFM1A2PYH4 1435 aa11.03□□□□□ -0.64
LSG1-205ENST00000461343 PREX2Q70Z35 1606 aa11.02□□□□□ -0.64
LSG1-205ENST00000461343 CAMSAP2Q08AD1 1489 aa11.02□□□□□ -0.65
LSG1-205ENST00000461343 SHANK2Q9UPX8 1470 aa11.02□□□□□ -0.65
LSG1-205ENST00000461343 MYO5CQ9NQX4 1742 aa11.02□□□□□ -0.65
LSG1-205ENST00000461343 DNMT1P26358 1616 aaKnown RBP11.02□□□□□ -0.65
LSG1-205ENST00000461343 ITGAEP38570 1179 aa11.01□□□□□ -0.65
LSG1-205ENST00000461343 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
LSG1-205ENST00000461343 CDC42BPAQ5VT25 1732 aa11.01□□□□□ -0.65
LSG1-205ENST00000461343 KIAA1107Q9UPP5 1409 aa11.01□□□□□ -0.65
LSG1-205ENST00000461343 ARHGEF5Q12774 1597 aa11□□□□□ -0.65
LSG1-205ENST00000461343 TSPY4P0CV99 314 aa11□□□□□ -0.65
LSG1-205ENST00000461343 TSPY10P0CW01 314 aa11□□□□□ -0.65
LSG1-205ENST00000461343 EFCAB2Q5VUJ9 269 aa11□□□□□ -0.65
LSG1-205ENST00000461343 PLCH2O75038 1416 aa11□□□□□ -0.65
LSG1-205ENST00000461343 DAPK1P53355 1430 aa11□□□□□ -0.65
LSG1-205ENST00000461343 ARHGAP5Q13017 1502 aa10.99□□□□□ -0.65
LSG1-205ENST00000461343 ANKRD30AQ9BXX3 1397 aa10.99□□□□□ -0.65
LSG1-205ENST00000461343 ASXL2Q76L83 1435 aa10.99□□□□□ -0.65
LSG1-205ENST00000461343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.99□□□□□ -0.65
LSG1-205ENST00000461343 CFAP74Q9C0B2 1584 aa10.99□□□□□ -0.65
LSG1-205ENST00000461343 MAPKBP1O60336 1514 aa10.98□□□□□ -0.65
LSG1-205ENST00000461343 RAB3GAP2Q9H2M9 1393 aa10.97□□□□□ -0.65
LSG1-205ENST00000461343 CCDC141Q6ZP82 1450 aa10.97□□□□□ -0.65
LSG1-205ENST00000461343 ABCA9Q8IUA7 1624 aa10.97□□□□□ -0.65
LSG1-205ENST00000461343 GCC2Q8IWJ2 1684 aa10.96□□□□□ -0.65
LSG1-205ENST00000461343 ADGBQ8N7X0 1667 aa10.96□□□□□ -0.65
LSG1-205ENST00000461343 ADGRL2O95490 1459 aa10.96□□□□□ -0.65
LSG1-205ENST00000461343 ZNF777Q9ULD5 760 aaPredicted RBP10.96□□□□□ -0.65
LSG1-205ENST00000461343 RIMBP3CA6NJZ7 1639 aa10.95□□□□□ -0.66
LSG1-205ENST00000461343 RIMBP3BA6NNM3 1639 aa10.95□□□□□ -0.66
LSG1-205ENST00000461343 RIMBP3Q9UFD9 1639 aa10.95□□□□□ -0.66
LSG1-205ENST00000461343 ABCC5O15440 1437 aa10.95□□□□□ -0.66
LSG1-205ENST00000461343 KCNH8Q96L42 1107 aa10.95□□□□□ -0.66
LSG1-205ENST00000461343 CROCC2H7BZ55 1655 aa10.95□□□□□ -0.66
LSG1-205ENST00000461343 TTC37Q6PGP7 1564 aa10.94□□□□□ -0.66
LSG1-205ENST00000461343 NAIPQ13075 1403 aa10.93□□□□□ -0.66
LSG1-205ENST00000461343 CDC42BPBQ9Y5S2 1711 aa10.93□□□□□ -0.66
LSG1-205ENST00000461343 TIMELESSQ9UNS1 1208 aa10.93□□□□□ -0.66
LSG1-205ENST00000461343 C9orf84Q5VXU9 1444 aa10.92□□□□□ -0.66
LSG1-205ENST00000461343 MAST1Q9Y2H9 1570 aa10.92□□□□□ -0.66
LSG1-205ENST00000461343 DHX57Q6P158 1386 aaKnown RBP10.91□□□□□ -0.66
LSG1-205ENST00000461343 MSH5O43196 834 aa10.91□□□□□ -0.66
LSG1-205ENST00000461343 FANCAO15360 1455 aa10.91□□□□□ -0.66
LSG1-205ENST00000461343 NCOA1Q15788 1441 aa10.91□□□□□ -0.66
LSG1-205ENST00000461343 SAMD9LQ8IVG5 1584 aa10.9□□□□□ -0.66
LSG1-205ENST00000461343 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.66
LSG1-205ENST00000461343 RTEL1-TNFRSF6BF6WH68 1400 aa10.9□□□□□ -0.66
LSG1-205ENST00000461343 GLI2P10070 1586 aa10.9□□□□□ -0.67
LSG1-205ENST00000461343 ABCC1P33527 1531 aa10.89□□□□□ -0.67
LSG1-205ENST00000461343 NEO1Q92859 1461 aa10.89□□□□□ -0.67
LSG1-205ENST00000461343 MBD5Q9P267 1494 aa10.89□□□□□ -0.67
LSG1-205ENST00000461343 PTPRKQ15262 1439 aa10.89□□□□□ -0.67
LSG1-205ENST00000461343 CD109Q6YHK3 1445 aa10.89□□□□□ -0.67
LSG1-205ENST00000461343 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
LSG1-205ENST00000461343 PLXNC1O60486 1568 aa10.88□□□□□ -0.67
LSG1-205ENST00000461343 SYCP2Q9BX26 1530 aa10.88□□□□□ -0.67
LSG1-205ENST00000461343 CHIC2Q9UKJ5 165 aa10.87□□□□□ -0.67
LSG1-205ENST00000461343 TEX14Q8IWB6 1497 aa10.87□□□□□ -0.67
LSG1-205ENST00000461343 ANKRD50Q9ULJ7 1429 aa10.86□□□□□ -0.67
LSG1-205ENST00000461343 RRP7BPQ9NSQ0 103 aa10.86□□□□□ -0.67
LSG1-205ENST00000461343 KIF15Q9NS87 1388 aa10.86□□□□□ -0.67
LSG1-205ENST00000461343 ADGRL1O94910 1474 aa10.86□□□□□ -0.67
LSG1-205ENST00000461343 ZNF518AQ6AHZ1 1483 aa10.86□□□□□ -0.67
LSG1-205ENST00000461343 ERBINQ96RT1 1412 aa10.85□□□□□ -0.67
LSG1-205ENST00000461343 DUOX2Q9NRD8 1548 aa10.85□□□□□ -0.67
LSG1-205ENST00000461343 HNRNPMP52272 730 aaKnown RBP eCLIP10.85□□□□□ -0.67
LSG1-205ENST00000461343 SPAG9O60271 1321 aaKnown RBP10.84□□□□□ -0.67
LSG1-205ENST00000461343 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
LSG1-205ENST00000461343 MAP3K4Q9Y6R4 1608 aa10.81□□□□□ -0.68
LSG1-205ENST00000461343 SCAPERQ9BY12 1400 aa10.81□□□□□ -0.68
LSG1-205ENST00000461343 KDM5DQ9BY66 1539 aa10.8□□□□□ -0.68
LSG1-205ENST00000461343 POGZQ7Z3K3 1410 aa10.79□□□□□ -0.68
LSG1-205ENST00000461343 DENND4BO75064 1496 aaPredicted RBP10.79□□□□□ -0.68
LSG1-205ENST00000461343 ATP7AQ04656 1500 aa10.79□□□□□ -0.68
LSG1-205ENST00000461343 DIP2BQ9P265 1576 aa10.78□□□□□ -0.68
LSG1-205ENST00000461343 MPHOSPH9Q99550 1183 aa10.78□□□□□ -0.68
LSG1-205ENST00000461343 SLC4A1APQ9BWU0 796 aaKnown RBP10.78□□□□□ -0.68
LSG1-205ENST00000461343 MLH3Q9UHC1 1453 aa10.78□□□□□ -0.68
LSG1-205ENST00000461343 ZFYVE16Q7Z3T8 1539 aa10.78□□□□□ -0.68
LSG1-205ENST00000461343 KANK1Q14678 1352 aa10.77□□□□□ -0.68
LSG1-205ENST00000461343 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.68
LSG1-205ENST00000461343 EIF2AK4Q9P2K8 1649 aaKnown RBP10.77□□□□□ -0.68
LSG1-205ENST00000461343 FAM69CQ0P6D2 419 aa10.77□□□□□ -0.69
LSG1-205ENST00000461343 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.69
LSG1-205ENST00000461343 KDM5CP41229 1560 aa10.77□□□□□ -0.69
LSG1-205ENST00000461343 NUP155O75694 1391 aa10.77□□□□□ -0.69
LSG1-205ENST00000461343 TONSLQ96HA7 1378 aa10.77□□□□□ -0.69
LSG1-205ENST00000461343 TRAPPC8Q9Y2L5 1435 aa10.76□□□□□ -0.69
LSG1-205ENST00000461343 MAGI2Q86UL8 1455 aa10.76□□□□□ -0.69
LSG1-205ENST00000461343 ARHGEF12Q9NZN5 1544 aa10.76□□□□□ -0.69
LSG1-205ENST00000461343 UNC13BO14795 1591 aa10.75□□□□□ -0.69
LSG1-205ENST00000461343 HECW2Q9P2P5 1572 aa10.75□□□□□ -0.69
LSG1-205ENST00000461343 DHX29Q7Z478 1369 aaKnown RBP10.74□□□□□ -0.69
LSG1-205ENST00000461343 AFAP1Q8N556 730 aa10.73□□□□□ -0.69
LSG1-205ENST00000461343 A2MP01023 1474 aa10.71□□□□□ -0.69
LSG1-205ENST00000461343 PZPP20742 1482 aa10.71□□□□□ -0.69
LSG1-205ENST00000461343 ZMYM4Q5VZL5 1548 aa10.71□□□□□ -0.69
LSG1-205ENST00000461343 IQGAP3Q86VI3 1631 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms