RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 VPS8Q8N3P4 1428 aa32.5■■■□□ 2.79
SCAF8-204ENST00000461219 CDC42BPAQ5VT25 1732 aa32.48■■■□□ 2.79
SCAF8-204ENST00000461219 FRMPD1Q5SYB0 1578 aa32.47■■■□□ 2.79
SCAF8-204ENST00000461219 SCAPERQ9BY12 1400 aa32.44■■■□□ 2.78
SCAF8-204ENST00000461219 EHBP1L1Q8N3D4 1523 aa32.44■■■□□ 2.78
SCAF8-204ENST00000461219 TIAM1Q13009 1591 aa32.37■■■□□ 2.77
SCAF8-204ENST00000461219 CCNB3Q8WWL7 1395 aa32.37■■■□□ 2.77
SCAF8-204ENST00000461219 POGZQ7Z3K3 1410 aa32.35■■■□□ 2.77
SCAF8-204ENST00000461219 SUPT6HQ7KZ85 1726 aaKnown RBP32.35■■■□□ 2.77
SCAF8-204ENST00000461219 ZNF777Q9ULD5 760 aaPredicted RBP32.34■■■□□ 2.77
SCAF8-204ENST00000461219 ZMYM4Q5VZL5 1548 aa32.34■■■□□ 2.77
SCAF8-204ENST00000461219 ITSN2Q9NZM3 1697 aa32.34■■■□□ 2.77
SCAF8-204ENST00000461219 ARHGEF40Q8TER5 1519 aa32.33■■■□□ 2.77
SCAF8-204ENST00000461219 KDM4FA0A1W2PPD8 638 aa32.33■■■□□ 2.77
SCAF8-204ENST00000461219 MYT1LQ9UL68 1186 aa32.33■■■□□ 2.77
SCAF8-204ENST00000461219 APLP2Q06481 763 aa32.32■■■□□ 2.76
SCAF8-204ENST00000461219 ZFYVE16Q7Z3T8 1539 aa32.31■■■□□ 2.76
SCAF8-204ENST00000461219 ZNF518AQ6AHZ1 1483 aa32.3■■■□□ 2.76
SCAF8-204ENST00000461219 ARID4BQ4LE39 1312 aaPredicted RBP32.29■■■□□ 2.76
SCAF8-204ENST00000461219 GPATCH8Q9UKJ3 1502 aaKnown RBP32.29■■■□□ 2.76
SCAF8-204ENST00000461219 ABCC1P33527 1531 aa32.28■■■□□ 2.76
SCAF8-204ENST00000461219 CFDP1Q9UEE9 299 aaPredicted RBP32.28■■■□□ 2.76
SCAF8-204ENST00000461219 MAGI2Q86UL8 1455 aa32.27■■■□□ 2.76
SCAF8-204ENST00000461219 SAMD9LQ8IVG5 1584 aa32.23■■■□□ 2.75
SCAF8-204ENST00000461219 MAP3K1Q13233 1512 aa32.21■■■□□ 2.75
SCAF8-204ENST00000461219 HECW2Q9P2P5 1572 aa32.2■■■□□ 2.75
SCAF8-204ENST00000461219 AFAP1Q8N556 730 aa32.2■■■□□ 2.75
SCAF8-204ENST00000461219 LRRC9Q6ZRR7 1453 aa32.2■■■□□ 2.75
SCAF8-204ENST00000461219 NCOA2Q15596 1464 aa32.19■■■□□ 2.74
SCAF8-204ENST00000461219 KDM5CP41229 1560 aa32.19■■■□□ 2.74
SCAF8-204ENST00000461219 YEATS2Q9ULM3 1422 aa32.18■■■□□ 2.74
SCAF8-204ENST00000461219 SYCP2Q9BX26 1530 aa32.18■■■□□ 2.74
SCAF8-204ENST00000461219 PLEKHH2Q8IVE3 1493 aa32.17■■■□□ 2.74
SCAF8-204ENST00000461219 ARHGEF12Q9NZN5 1544 aa32.14■■■□□ 2.74
SCAF8-204ENST00000461219 BCORL1Q5H9F3 1711 aa32.14■■■□□ 2.74
SCAF8-204ENST00000461219 TRAPPC8Q9Y2L5 1435 aa32.13■■■□□ 2.73
SCAF8-204ENST00000461219 HNRNPMP52272 730 aaKnown RBP eCLIP32.11■■■□□ 2.732e-6■■■□□ 15.7
SCAF8-204ENST00000461219 ATP10AO60312 1499 aa32.1■■■□□ 2.73
SCAF8-204ENST00000461219 C9orf84Q5VXU9 1444 aa32.09■■■□□ 2.73
SCAF8-204ENST00000461219 KANK4Q5T7N3 995 aaPredicted RBP32.07■■■□□ 2.72
SCAF8-204ENST00000461219 KIAA1107Q9UPP5 1409 aa32.07■■■□□ 2.72
SCAF8-204ENST00000461219 ADAMTSL3P82987 1691 aa32.06■■■□□ 2.72
SCAF8-204ENST00000461219 MLH3Q9UHC1 1453 aa32.06■■■□□ 2.72
SCAF8-204ENST00000461219 ABCA6Q8N139 1617 aa32.04■■■□□ 2.72
SCAF8-204ENST00000461219 DIP2CQ9Y2E4 1556 aa32.04■■■□□ 2.72
SCAF8-204ENST00000461219 KIDINS220Q9ULH0 1771 aa32.04■■■□□ 2.72
SCAF8-204ENST00000461219 SPAG9O60271 1321 aaKnown RBP32.03■■■□□ 2.72
SCAF8-204ENST00000461219 SIGLEC1Q9BZZ2 1709 aa32.03■■■□□ 2.72
SCAF8-204ENST00000461219 ZNF644Q9H582 1327 aaPredicted RBP32.01■■■□□ 2.72
SCAF8-204ENST00000461219 MADDQ8WXG6 1647 aa32.01■■■□□ 2.72
SCAF8-204ENST00000461219 MLECQ14165 292 aa32.01■■■□□ 2.71
SCAF8-204ENST00000461219 CAMSAP2Q08AD1 1489 aa31.99■■■□□ 2.71
SCAF8-204ENST00000461219 RIMS1Q86UR5 1692 aaKnown RBP31.99■■■□□ 2.71
SCAF8-204ENST00000461219 FER1L4A9Z1Z3 1794 aa31.98■■■□□ 2.71
SCAF8-204ENST00000461219 ATP7AQ04656 1500 aa31.96■■■□□ 2.71
SCAF8-204ENST00000461219 REREQ9P2R6 1566 aa31.93■■■□□ 2.7
SCAF8-204ENST00000461219 INO80Q9ULG1 1556 aaPredicted RBP31.93■■■□□ 2.7
SCAF8-204ENST00000461219 MYOM3Q5VTT5 1437 aa31.92■■■□□ 2.7
SCAF8-204ENST00000461219 PTPRMP28827 1452 aa31.9■■■□□ 2.7
SCAF8-204ENST00000461219 CCDC141Q6ZP82 1450 aa31.89■■■□□ 2.7
SCAF8-204ENST00000461219 MBD5Q9P267 1494 aa31.88■■■□□ 2.69
SCAF8-204ENST00000461219 ADGBQ8N7X0 1667 aa31.88■■■□□ 2.69
SCAF8-204ENST00000461219 RSPH4AQ5TD94 716 aa31.87■■■□□ 2.69
SCAF8-204ENST00000461219 PLPPR3Q6T4P5 718 aa31.87■■■□□ 2.69
SCAF8-204ENST00000461219 MIA2Q96PC5 1412 aa31.85■■■□□ 2.69
SCAF8-204ENST00000461219 ARHGEF5Q12774 1597 aa31.84■■■□□ 2.69
SCAF8-204ENST00000461219 ESF1Q9H501 851 aaKnown RBP31.83■■■□□ 2.69
SCAF8-204ENST00000461219 AGLP35573 1532 aa31.82■■■□□ 2.68
SCAF8-204ENST00000461219 TSPY4P0CV99 314 aa31.82■■■□□ 2.68
SCAF8-204ENST00000461219 TSPY10P0CW01 314 aa31.82■■■□□ 2.68
SCAF8-204ENST00000461219 A2MP01023 1474 aa31.79■■■□□ 2.68
SCAF8-204ENST00000461219 PTPN23Q9H3S7 1636 aa31.79■■■□□ 2.68
SCAF8-204ENST00000461219 RTEL1-TNFRSF6BF6WH68 1400 aa31.79■■■□□ 2.68
SCAF8-204ENST00000461219 FGD6Q6ZV73 1430 aa31.71■■■□□ 2.67
SCAF8-204ENST00000461219 PLXNC1O60486 1568 aa31.71■■■□□ 2.67
SCAF8-204ENST00000461219 CROCC2H7BZ55 1655 aa31.67■■■□□ 2.66
SCAF8-204ENST00000461219 MAST1Q9Y2H9 1570 aa31.66■■■□□ 2.66
SCAF8-204ENST00000461219 GGT6Q6P531 493 aa31.64■■■□□ 2.66
SCAF8-204ENST00000461219 DHX29Q7Z478 1369 aaKnown RBP31.63■■■□□ 2.65
SCAF8-204ENST00000461219 CNTLNQ9NXG0 1405 aa31.62■■■□□ 2.65
SCAF8-204ENST00000461219 C3P01024 1663 aa31.61■■■□□ 2.65
SCAF8-204ENST00000461219 FAM50AQ14320 339 aaKnown RBP31.61■■■□□ 2.65
SCAF8-204ENST00000461219 CLTCQ00610 1675 aaKnown RBP31.6■■■□□ 2.65
SCAF8-204ENST00000461219 DNMT1P26358 1616 aaKnown RBP31.6■■■□□ 2.65
SCAF8-204ENST00000461219 TCOF1Q13428 1488 aaKnown RBP31.6■■■□□ 2.65
SCAF8-204ENST00000461219 PPARGC1BQ86YN6 1023 aaKnown RBP31.6■■■□□ 2.65
SCAF8-204ENST00000461219 CEBPAP49715 358 aaPredicted RBP31.58■■■□□ 2.65
SCAF8-204ENST00000461219 MROH2AA6NES4 1674 aa31.57■■■□□ 2.65
SCAF8-204ENST00000461219 KIF3BO15066 747 aa31.57■■■□□ 2.64
SCAF8-204ENST00000461219 DAPK1P53355 1430 aa31.56■■■□□ 2.64
SCAF8-204ENST00000461219 SHANK2Q9UPX8 1470 aa31.55■■■□□ 2.64
SCAF8-204ENST00000461219 SETD1BQ9UPS6 1966 aaKnown RBP31.55■■■□□ 2.64
SCAF8-204ENST00000461219 PREX1Q8TCU6 1659 aa31.54■■■□□ 2.64
SCAF8-204ENST00000461219 ABCC5O15440 1437 aa31.53■■■□□ 2.64
SCAF8-204ENST00000461219 PPP6R1Q9UPN7 881 aa31.49■■■□□ 2.63
SCAF8-204ENST00000461219 EIF2AK4Q9P2K8 1649 aaKnown RBP31.48■■■□□ 2.63
SCAF8-204ENST00000461219 DUOX2Q9NRD8 1548 aa31.48■■■□□ 2.63
SCAF8-204ENST00000461219 CHIC2Q9UKJ5 165 aa31.47■■■□□ 2.63
SCAF8-204ENST00000461219 LMTK3Q96Q04 1460 aa31.46■■■□□ 2.63
SCAF8-204ENST00000461219 KIF15Q9NS87 1388 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms