RNA–Protein interactions for RNA: ENST00000460841.1

C4A-245, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-245ENST00000460841 YEATS2Q9ULM3 1422 aa25.33■■□□□ 1.65
C4A-245ENST00000460841 ARHGEF40Q8TER5 1519 aa25.32■■□□□ 1.64
C4A-245ENST00000460841 ARHGAP5Q13017 1502 aa25.32■■□□□ 1.64
C4A-245ENST00000460841 ZMYM4Q5VZL5 1548 aa25.32■■□□□ 1.64
C4A-245ENST00000460841 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
C4A-245ENST00000460841 ADAMTSL3P82987 1691 aa25.3■■□□□ 1.64
C4A-245ENST00000460841 ZFYVE16Q7Z3T8 1539 aa25.29■■□□□ 1.64
C4A-245ENST00000460841 BCORL1Q5H9F3 1711 aa25.27■■□□□ 1.64
C4A-245ENST00000460841 CDC42BPBQ9Y5S2 1711 aa25.27■■□□□ 1.64
C4A-245ENST00000460841 AFAP1Q8N556 730 aa25.27■■□□□ 1.64
C4A-245ENST00000460841 PTPRMP28827 1452 aa25.27■■□□□ 1.64
C4A-245ENST00000460841 MAGI2Q86UL8 1455 aa25.27■■□□□ 1.64
C4A-245ENST00000460841 LOC105371045A0A1W2PR82 267 aa25.26■■□□□ 1.63
C4A-245ENST00000460841 CEP162Q5TB80 1403 aa25.26■■□□□ 1.63
C4A-245ENST00000460841 SIGLEC1Q9BZZ2 1709 aa25.23■■□□□ 1.63
C4A-245ENST00000460841 PREX2Q70Z35 1606 aa25.21■■□□□ 1.63
C4A-245ENST00000460841 MADDQ8WXG6 1647 aa25.21■■□□□ 1.63
C4A-245ENST00000460841 MLECQ14165 292 aa25.2■■□□□ 1.62
C4A-245ENST00000460841 ZNF518AQ6AHZ1 1483 aa25.2■■□□□ 1.62
C4A-245ENST00000460841 MYT1LQ9UL68 1186 aa25.18■■□□□ 1.62
C4A-245ENST00000460841 CDC42BPAQ5VT25 1732 aa25.17■■□□□ 1.62
C4A-245ENST00000460841 ARHGEF12Q9NZN5 1544 aa25.17■■□□□ 1.62
C4A-245ENST00000460841 ATP10AO60312 1499 aa25.17■■□□□ 1.62
C4A-245ENST00000460841 ZNF777Q9ULD5 760 aaPredicted RBP25.17■■□□□ 1.62
C4A-245ENST00000460841 TRAPPC8Q9Y2L5 1435 aa25.15■■□□□ 1.62
C4A-245ENST00000460841 KDM5CP41229 1560 aa25.14■■□□□ 1.62
C4A-245ENST00000460841 GPATCH8Q9UKJ3 1502 aaKnown RBP25.14■■□□□ 1.62
C4A-245ENST00000460841 MTUS2Q5JR59 1369 aa25.14■■□□□ 1.61
C4A-245ENST00000460841 ABCC1P33527 1531 aa25.13■■□□□ 1.61
C4A-245ENST00000460841 RIMS1Q86UR5 1692 aaKnown RBP25.13■■□□□ 1.61
C4A-245ENST00000460841 C9orf84Q5VXU9 1444 aa25.12■■□□□ 1.61
C4A-245ENST00000460841 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
C4A-245ENST00000460841 ITSN2Q9NZM3 1697 aa25.09■■□□□ 1.61
C4A-245ENST00000460841 CCNB3Q8WWL7 1395 aa25.08■■□□□ 1.61
C4A-245ENST00000460841 HNRNPMP52272 730 aaKnown RBP eCLIP25.08■■□□□ 1.61
C4A-245ENST00000460841 CFDP1Q9UEE9 299 aaPredicted RBP25.08■■□□□ 1.61
C4A-245ENST00000460841 MLH3Q9UHC1 1453 aa25.08■■□□□ 1.6
C4A-245ENST00000460841 SAMD9LQ8IVG5 1584 aa25.06■■□□□ 1.6
C4A-245ENST00000460841 FBXO41Q8TF61 875 aa25.06■■□□□ 1.6
C4A-245ENST00000460841 DIP2CQ9Y2E4 1556 aa25.05■■□□□ 1.6
C4A-245ENST00000460841 ABCA6Q8N139 1617 aa25.03■■□□□ 1.6
C4A-245ENST00000460841 LMTK3Q96Q04 1460 aa25.02■■□□□ 1.6
C4A-245ENST00000460841 SYCP2Q9BX26 1530 aa25.02■■□□□ 1.6
C4A-245ENST00000460841 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
C4A-245ENST00000460841 EHBP1L1Q8N3D4 1523 aa25.01■■□□□ 1.59
C4A-245ENST00000460841 ZNF644Q9H582 1327 aaPredicted RBP25■■□□□ 1.59
C4A-245ENST00000460841 KIDINS220Q9ULH0 1771 aa25■■□□□ 1.59
C4A-245ENST00000460841 HSPA2P54652 639 aa24.99■■□□□ 1.59
C4A-245ENST00000460841 TIAM1Q13009 1591 aa24.97■■□□□ 1.59
C4A-245ENST00000460841 KIAA1107Q9UPP5 1409 aa24.97■■□□□ 1.59
C4A-245ENST00000460841 SPAG9O60271 1321 aaKnown RBP24.97■■□□□ 1.59
C4A-245ENST00000460841 CEBPAP49715 358 aaPredicted RBP24.97■■□□□ 1.59
C4A-245ENST00000460841 VPS8Q8N3P4 1428 aa24.96■■□□□ 1.59
C4A-245ENST00000460841 REREQ9P2R6 1566 aa24.96■■□□□ 1.59
C4A-245ENST00000460841 PLEKHH2Q8IVE3 1493 aa24.95■■□□□ 1.58
C4A-245ENST00000460841 AGLP35573 1532 aa24.91■■□□□ 1.58
C4A-245ENST00000460841 NCOA2Q15596 1464 aa24.9■■□□□ 1.58
C4A-245ENST00000460841 SUPT6HQ7KZ85 1726 aaKnown RBP24.88■■□□□ 1.57
C4A-245ENST00000460841 ATP7AQ04656 1500 aa24.87■■□□□ 1.57
C4A-245ENST00000460841 MBD5Q9P267 1494 aa24.86■■□□□ 1.57
C4A-245ENST00000460841 KANK4Q5T7N3 995 aaPredicted RBP24.85■■□□□ 1.57
C4A-245ENST00000460841 ESF1Q9H501 851 aaKnown RBP24.85■■□□□ 1.57
C4A-245ENST00000460841 LRRC9Q6ZRR7 1453 aa24.84■■□□□ 1.57
C4A-245ENST00000460841 INO80Q9ULG1 1556 aaPredicted RBP24.84■■□□□ 1.57
C4A-245ENST00000460841 A2MP01023 1474 aa24.81■■□□□ 1.56
C4A-245ENST00000460841 CAMSAP2Q08AD1 1489 aa24.78■■□□□ 1.56
C4A-245ENST00000460841 C3P01024 1663 aa24.77■■□□□ 1.56
C4A-245ENST00000460841 MAP3K1Q13233 1512 aa24.76■■□□□ 1.55
C4A-245ENST00000460841 GGT6Q6P531 493 aa24.76■■□□□ 1.55
C4A-245ENST00000460841 PLXNC1O60486 1568 aa24.76■■□□□ 1.55
C4A-245ENST00000460841 SETD1BQ9UPS6 1966 aaKnown RBP24.75■■□□□ 1.55
C4A-245ENST00000460841 CERKQ8TCT0 537 aa24.74■■□□□ 1.55
C4A-245ENST00000460841 RTEL1-TNFRSF6BF6WH68 1400 aa24.74■■□□□ 1.55
C4A-245ENST00000460841 PREX1Q8TCU6 1659 aa24.74■■□□□ 1.55
C4A-245ENST00000460841 CCDC141Q6ZP82 1450 aa24.73■■□□□ 1.55
C4A-245ENST00000460841 CNTLNQ9NXG0 1405 aa24.73■■□□□ 1.55
C4A-245ENST00000460841 RSPH4AQ5TD94 716 aa24.72■■□□□ 1.55
C4A-245ENST00000460841 ADGBQ8N7X0 1667 aa24.71■■□□□ 1.55
C4A-245ENST00000460841 UHRF1BP1Q6BDS2 1440 aa24.7■■□□□ 1.55
C4A-245ENST00000460841 ZMYM3Q14202 1370 aa24.7■■□□□ 1.55
C4A-245ENST00000460841 DHX29Q7Z478 1369 aaKnown RBP24.68■■□□□ 1.54
C4A-245ENST00000460841 APLP2Q06481 763 aa24.68■■□□□ 1.54
C4A-245ENST00000460841 DMRT2Q9Y5R5 561 aa24.68■■□□□ 1.54
C4A-245ENST00000460841 TSPY4P0CV99 314 aa24.67■■□□□ 1.54
C4A-245ENST00000460841 TSPY10P0CW01 314 aa24.67■■□□□ 1.54
C4A-245ENST00000460841 CLTCQ00610 1675 aaKnown RBP24.66■■□□□ 1.54
C4A-245ENST00000460841 ARHGEF5Q12774 1597 aa24.65■■□□□ 1.54
C4A-245ENST00000460841 MYOM3Q5VTT5 1437 aa24.65■■□□□ 1.54
C4A-245ENST00000460841 KIF3BO15066 747 aa24.64■■□□□ 1.54
C4A-245ENST00000460841 MROH2AA6NES4 1674 aa24.64■■□□□ 1.53
C4A-245ENST00000460841 MIA2Q96PC5 1412 aa24.61■■□□□ 1.53
C4A-245ENST00000460841 PPP6R1Q9UPN7 881 aa24.61■■□□□ 1.53
C4A-245ENST00000460841 STRCQ7RTU9 1775 aa24.59■■□□□ 1.53
C4A-245ENST00000460841 NPATQ14207 1427 aa24.59■■□□□ 1.53
C4A-245ENST00000460841 PTPRKQ15262 1439 aa24.56■■□□□ 1.52
C4A-245ENST00000460841 MAST1Q9Y2H9 1570 aa24.52■■□□□ 1.52
C4A-245ENST00000460841 WASHC2CQ9Y4E1 1318 aa24.51■■□□□ 1.51
C4A-245ENST00000460841 FBXO31Q5XUX0 539 aaPredicted RBP24.5■■□□□ 1.51
C4A-245ENST00000460841 PTPN23Q9H3S7 1636 aa24.49■■□□□ 1.51
C4A-245ENST00000460841 PTPRTO14522 1441 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms