RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 BCL11BQ9C0K0 894 aaPredicted RBP11.06□□□□□ -0.64
CCDC58-202ENST00000460810 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
CCDC58-202ENST00000460810 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
CCDC58-202ENST00000460810 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
CCDC58-202ENST00000460810 ERBB3P21860 1342 aa11.03□□□□□ -0.64
CCDC58-202ENST00000460810 ECM2O94769 699 aaPredicted RBP11.02□□□□□ -0.65
CCDC58-202ENST00000460810 STK25O00506 426 aa10.99□□□□□ -0.65
CCDC58-202ENST00000460810 MFRPQ9BY79 579 aa10.98□□□□□ -0.65
CCDC58-202ENST00000460810 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
CCDC58-202ENST00000460810 PKD2Q13563 968 aa10.95□□□□□ -0.66
CCDC58-202ENST00000460810 VARS2Q5ST30 1063 aaKnown RBP10.94□□□□□ -0.66
CCDC58-202ENST00000460810 ZNF687Q8N1G0 1237 aa10.92□□□□□ -0.66
CCDC58-202ENST00000460810 RGL2O15211 777 aa10.91□□□□□ -0.66
CCDC58-202ENST00000460810 KIF3CO14782 793 aa10.89□□□□□ -0.67
CCDC58-202ENST00000460810 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
CCDC58-202ENST00000460810 C2orf72A6NCS6 295 aa10.85□□□□□ -0.67
CCDC58-202ENST00000460810 ZNF316A6NFI3 1004 aaPredicted RBP10.82□□□□□ -0.68
CCDC58-202ENST00000460810 SLC34A2O95436 690 aa10.81□□□□□ -0.68
CCDC58-202ENST00000460810 TMC2Q8TDI7 906 aa10.8□□□□□ -0.68
CCDC58-202ENST00000460810 KHSRPQ92945 711 aaKnown RBP eCLIP10.8□□□□□ -0.68
CCDC58-202ENST00000460810 PTGER2P43116 358 aa10.78□□□□□ -0.68
CCDC58-202ENST00000460810 RNF166Q96A37 237 aaPredicted RBP10.78□□□□□ -0.68
CCDC58-202ENST00000460810 PPP1R37O75864 691 aa10.76□□□□□ -0.69
CCDC58-202ENST00000460810 MYT1LQ9UL68 1186 aa10.76□□□□□ -0.69
CCDC58-202ENST00000460810 PCDHGA4Q9Y5G9 962 aa10.75□□□□□ -0.69
CCDC58-202ENST00000460810 NUDT7P0C024 238 aa10.74□□□□□ -0.69
CCDC58-202ENST00000460810 HS6ST3Q8IZP7 471 aa10.74□□□□□ -0.69
CCDC58-202ENST00000460810 PBX2P40425 430 aa10.71□□□□□ -0.69
CCDC58-202ENST00000460810 ANKRD13DQ6ZTN6 518 aa10.71□□□□□ -0.69
CCDC58-202ENST00000460810 LSM11P83369 360 aaKnown RBP eCLIP10.7□□□□□ -0.7
CCDC58-202ENST00000460810 LHX6Q9UPM6 363 aa10.7□□□□□ -0.7
CCDC58-202ENST00000460810 FOXK1P85037 733 aa10.67□□□□□ -0.7
CCDC58-202ENST00000460810 PSDA5PKW4 1024 aaPredicted RBP10.66□□□□□ -0.7
CCDC58-202ENST00000460810 PTCD2Q8WV60 388 aaKnown RBP10.66□□□□□ -0.7
CCDC58-202ENST00000460810 GPHNQ9NQX3 736 aaPredicted RBP10.66□□□□□ -0.7
CCDC58-202ENST00000460810 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
CCDC58-202ENST00000460810 KDM4FA0A1W2PPD8 638 aa10.63□□□□□ -0.71
CCDC58-202ENST00000460810 CHGAP10645 457 aaKnown RBP10.63□□□□□ -0.71
CCDC58-202ENST00000460810 POTEEQ6S8J3 1075 aa10.63□□□□□ -0.71
CCDC58-202ENST00000460810 PLPP6Q8IY26 295 aa10.62□□□□□ -0.71
CCDC58-202ENST00000460810 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
CCDC58-202ENST00000460810 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
CCDC58-202ENST00000460810 TBC1D12O60347 775 aa10.59□□□□□ -0.71
CCDC58-202ENST00000460810 AXIN2Q9Y2T1 843 aa10.59□□□□□ -0.71
CCDC58-202ENST00000460810 DSG2Q14126 1118 aa10.58□□□□□ -0.72
CCDC58-202ENST00000460810 NKX1-1Q15270 411 aaPredicted RBP10.55□□□□□ -0.72
CCDC58-202ENST00000460810 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
CCDC58-202ENST00000460810 ADGRD1Q6QNK2 874 aa10.53□□□□□ -0.72
CCDC58-202ENST00000460810 TK2O00142 265 aa10.52□□□□□ -0.73
CCDC58-202ENST00000460810 CRISPLD2Q9H0B8 497 aa10.5□□□□□ -0.73
CCDC58-202ENST00000460810 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
CCDC58-202ENST00000460810 HCSTQ9UBK5 93 aa10.48□□□□□ -0.73
CCDC58-202ENST00000460810 HRO43593 1189 aa10.46□□□□□ -0.73
CCDC58-202ENST00000460810 PSEN2P49810 448 aa10.46□□□□□ -0.73
CCDC58-202ENST00000460810 DMRTA1Q5VZB9 504 aa10.46□□□□□ -0.73
CCDC58-202ENST00000460810 PDE4AP27815 886 aa10.45□□□□□ -0.74
CCDC58-202ENST00000460810 PPP1R15BQ5SWA1 713 aa10.45□□□□□ -0.74
CCDC58-202ENST00000460810 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
CCDC58-202ENST00000460810 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCDC58-202ENST00000460810 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
CCDC58-202ENST00000460810 GTPBP6O43824 516 aaPredicted RBP10.41□□□□□ -0.74
CCDC58-202ENST00000460810 STAC3Q96MF2 364 aa10.4□□□□□ -0.74
CCDC58-202ENST00000460810 KCNK17Q96T54 332 aa10.4□□□□□ -0.74
CCDC58-202ENST00000460810 ZNF454Q8N9F8 522 aa10.38□□□□□ -0.75
CCDC58-202ENST00000460810 SLC4A5Q9BY07 1137 aa10.38□□□□□ -0.75
CCDC58-202ENST00000460810 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
CCDC58-202ENST00000460810 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
CCDC58-202ENST00000460810 PLA2G2EQ9NZK7 142 aa10.38□□□□□ -0.75
CCDC58-202ENST00000460810 VPS9D1Q9Y2B5 631 aa10.37□□□□□ -0.75
CCDC58-202ENST00000460810 FOSBP53539 338 aa10.36□□□□□ -0.75
CCDC58-202ENST00000460810 DDX27Q96GQ7 796 aaKnown RBP10.35□□□□□ -0.75
CCDC58-202ENST00000460810 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
CCDC58-202ENST00000460810 EVI5O60447 810 aa10.33□□□□□ -0.76
CCDC58-202ENST00000460810 PTPREP23469 700 aa10.33□□□□□ -0.76
CCDC58-202ENST00000460810 MFSD10Q14728 455 aa10.33□□□□□ -0.76
CCDC58-202ENST00000460810 KCTD12Q96CX2 325 aaKnown RBP10.33□□□□□ -0.76
CCDC58-202ENST00000460810 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
CCDC58-202ENST00000460810 BHMG1C9JSJ3 638 aaPredicted RBP10.29□□□□□ -0.76
CCDC58-202ENST00000460810 MAP3K9P80192 1104 aa10.29□□□□□ -0.76
CCDC58-202ENST00000460810 ZDHHC16Q969W1 377 aa10.29□□□□□ -0.76
CCDC58-202ENST00000460810 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
CCDC58-202ENST00000460810 DCAF8L2P0C7V8 631 aa10.27□□□□□ -0.77
CCDC58-202ENST00000460810 ADAM33Q9BZ11 813 aa10.25□□□□□ -0.77
CCDC58-202ENST00000460810 EMILIN3Q9NT22 766 aa10.24□□□□□ -0.77
CCDC58-202ENST00000460810 GOLGA8CPA6NN73 597 aa10.22□□□□□ -0.77
CCDC58-202ENST00000460810 MRPL50Q8N5N7 158 aaKnown RBP10.22□□□□□ -0.77
CCDC58-202ENST00000460810 PTPN5P54829 565 aa10.21□□□□□ -0.77
CCDC58-202ENST00000460810 THSD4Q6ZMP0 1018 aa10.21□□□□□ -0.77
CCDC58-202ENST00000460810 NBPF3Q9H094 633 aa10.21□□□□□ -0.77
CCDC58-202ENST00000460810 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
CCDC58-202ENST00000460810 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
CCDC58-202ENST00000460810 PCDHGA10Q9Y5H3 936 aa10.2□□□□□ -0.78
CCDC58-202ENST00000460810 PPP1R3GB7ZBB8 358 aa10.19□□□□□ -0.78
CCDC58-202ENST00000460810 PHF14O94880 888 aa10.19□□□□□ -0.78
CCDC58-202ENST00000460810 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
CCDC58-202ENST00000460810 WNT2BQ93097 391 aa10.19□□□□□ -0.78
CCDC58-202ENST00000460810 CAMK2BQ13554 666 aa10.17□□□□□ -0.78
CCDC58-202ENST00000460810 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
CCDC58-202ENST00000460810 RABGEF1Q9UJ41 708 aa10.17□□□□□ -0.78
CCDC58-202ENST00000460810 RGS20O76081 388 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms