RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 ZNF777Q9ULD5 760 aaPredicted RBP23.7■■□□□ 1.38
PCYT1A-212ENST00000460677 MYO5CQ9NQX4 1742 aa23.7■■□□□ 1.38
PCYT1A-212ENST00000460677 DNMT1P26358 1616 aaKnown RBP23.68■■□□□ 1.38
PCYT1A-212ENST00000460677 DAPK1P53355 1430 aa23.68■■□□□ 1.38
PCYT1A-212ENST00000460677 PLCH2O75038 1416 aa23.67■■□□□ 1.38
PCYT1A-212ENST00000460677 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
PCYT1A-212ENST00000460677 ARHGAP5Q13017 1502 aa23.66■■□□□ 1.38
PCYT1A-212ENST00000460677 HRCP23327 699 aa23.65■■□□□ 1.38
PCYT1A-212ENST00000460677 ABCC5O15440 1437 aa23.65■■□□□ 1.38
PCYT1A-212ENST00000460677 ABCA9Q8IUA7 1624 aa23.65■■□□□ 1.38
PCYT1A-212ENST00000460677 MAPKBP1O60336 1514 aa23.64■■□□□ 1.37
PCYT1A-212ENST00000460677 ARAP3Q8WWN8 1544 aa23.63■■□□□ 1.37
PCYT1A-212ENST00000460677 CCER1Q8TC90 406 aaPredicted RBP23.63■■□□□ 1.37
PCYT1A-212ENST00000460677 SAMD9LQ8IVG5 1584 aa23.62■■□□□ 1.37
PCYT1A-212ENST00000460677 HFM1A2PYH4 1435 aa23.62■■□□□ 1.37
PCYT1A-212ENST00000460677 RAB3GAP2Q9H2M9 1393 aa23.62■■□□□ 1.37
PCYT1A-212ENST00000460677 AKNAQ7Z591 1439 aa23.6■■□□□ 1.37
PCYT1A-212ENST00000460677 EFCAB2Q5VUJ9 269 aa23.59■■□□□ 1.37
PCYT1A-212ENST00000460677 CHIC2Q9UKJ5 165 aa23.59■■□□□ 1.37
PCYT1A-212ENST00000460677 ROCK1Q13464 1354 aa23.59■■□□□ 1.37
PCYT1A-212ENST00000460677 PLEKHH2Q8IVE3 1493 aa23.58■■□□□ 1.37
PCYT1A-212ENST00000460677 ARHGEF5Q12774 1597 aa23.58■■□□□ 1.36
PCYT1A-212ENST00000460677 MBD5Q9P267 1494 aa23.57■■□□□ 1.36
PCYT1A-212ENST00000460677 NAIPQ13075 1403 aa23.57■■□□□ 1.36
PCYT1A-212ENST00000460677 CROCC2H7BZ55 1655 aa23.57■■□□□ 1.36
PCYT1A-212ENST00000460677 KIAA1107Q9UPP5 1409 aa23.56■■□□□ 1.36
PCYT1A-212ENST00000460677 RSPH4AQ5TD94 716 aa23.56■■□□□ 1.36
PCYT1A-212ENST00000460677 HNRNPMP52272 730 aaKnown RBP eCLIP23.54■■□□□ 1.36
PCYT1A-212ENST00000460677 SHANK2Q9UPX8 1470 aa23.54■■□□□ 1.36
PCYT1A-212ENST00000460677 GCC2Q8IWJ2 1684 aa23.53■■□□□ 1.36
PCYT1A-212ENST00000460677 ZEB1P37275 1124 aaPredicted RBP23.52■■□□□ 1.36
PCYT1A-212ENST00000460677 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
PCYT1A-212ENST00000460677 SYCP2Q9BX26 1530 aa23.52■■□□□ 1.36
PCYT1A-212ENST00000460677 CCDC141Q6ZP82 1450 aa23.52■■□□□ 1.36
PCYT1A-212ENST00000460677 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
PCYT1A-212ENST00000460677 ADGBQ8N7X0 1667 aa23.5■■□□□ 1.35
PCYT1A-212ENST00000460677 TSPY4P0CV99 314 aa23.5■■□□□ 1.35
PCYT1A-212ENST00000460677 TSPY10P0CW01 314 aa23.5■■□□□ 1.35
PCYT1A-212ENST00000460677 CD109Q6YHK3 1445 aa23.5■■□□□ 1.35
PCYT1A-212ENST00000460677 FANCAO15360 1455 aa23.49■■□□□ 1.35
PCYT1A-212ENST00000460677 DHX57Q6P158 1386 aaKnown RBP23.49■■□□□ 1.35
PCYT1A-212ENST00000460677 ABCC1P33527 1531 aa23.49■■□□□ 1.35
PCYT1A-212ENST00000460677 C9orf84Q5VXU9 1444 aa23.48■■□□□ 1.35
PCYT1A-212ENST00000460677 NCOA1Q15788 1441 aa23.47■■□□□ 1.35
PCYT1A-212ENST00000460677 ARHGEF12Q9NZN5 1544 aa23.47■■□□□ 1.35
PCYT1A-212ENST00000460677 GLI2P10070 1586 aa23.47■■□□□ 1.35
PCYT1A-212ENST00000460677 ANKRD30AQ9BXX3 1397 aa23.46■■□□□ 1.35
PCYT1A-212ENST00000460677 MAST1Q9Y2H9 1570 aa23.43■■□□□ 1.34
PCYT1A-212ENST00000460677 CFAP74Q9C0B2 1584 aa23.41■■□□□ 1.34
PCYT1A-212ENST00000460677 CLSPNQ9HAW4 1339 aa23.4■■□□□ 1.34
PCYT1A-212ENST00000460677 MAP3K4Q9Y6R4 1608 aa23.4■■□□□ 1.34
PCYT1A-212ENST00000460677 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
PCYT1A-212ENST00000460677 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
PCYT1A-212ENST00000460677 KDM6BO15054 1643 aa23.39■■□□□ 1.34
PCYT1A-212ENST00000460677 ADGRL1O94910 1474 aa23.39■■□□□ 1.33
PCYT1A-212ENST00000460677 TRAPPC8Q9Y2L5 1435 aa23.39■■□□□ 1.33
PCYT1A-212ENST00000460677 SCAPERQ9BY12 1400 aa23.36■■□□□ 1.33
PCYT1A-212ENST00000460677 FAM69CQ0P6D2 419 aa23.36■■□□□ 1.33
PCYT1A-212ENST00000460677 NEO1Q92859 1461 aa23.35■■□□□ 1.33
PCYT1A-212ENST00000460677 KIF15Q9NS87 1388 aa23.34■■□□□ 1.33
PCYT1A-212ENST00000460677 PLXNC1O60486 1568 aa23.33■■□□□ 1.33
PCYT1A-212ENST00000460677 ANKRD50Q9ULJ7 1429 aa23.32■■□□□ 1.32
PCYT1A-212ENST00000460677 AFAP1Q8N556 730 aa23.32■■□□□ 1.32
PCYT1A-212ENST00000460677 RTEL1-TNFRSF6BF6WH68 1400 aa23.31■■□□□ 1.32
PCYT1A-212ENST00000460677 SPAG9O60271 1321 aaKnown RBP23.3■■□□□ 1.32
PCYT1A-212ENST00000460677 TRIM52Q96A61 297 aa23.28■■□□□ 1.32
PCYT1A-212ENST00000460677 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
PCYT1A-212ENST00000460677 ZNF518AQ6AHZ1 1483 aa23.26■■□□□ 1.31
PCYT1A-212ENST00000460677 ZFYVE16Q7Z3T8 1539 aa23.26■■□□□ 1.31
PCYT1A-212ENST00000460677 POGZQ7Z3K3 1410 aa23.25■■□□□ 1.31
PCYT1A-212ENST00000460677 DUOX2Q9NRD8 1548 aa23.24■■□□□ 1.31
PCYT1A-212ENST00000460677 INO80Q9ULG1 1556 aaPredicted RBP23.24■■□□□ 1.31
PCYT1A-212ENST00000460677 KIF13AQ9H1H9 1805 aa23.23■■□□□ 1.31
PCYT1A-212ENST00000460677 ATP7AQ04656 1500 aa23.23■■□□□ 1.31
PCYT1A-212ENST00000460677 TEX14Q8IWB6 1497 aa23.22■■□□□ 1.31
PCYT1A-212ENST00000460677 DENND4BO75064 1496 aaPredicted RBP23.21■■□□□ 1.31
PCYT1A-212ENST00000460677 KDM5CP41229 1560 aa23.21■■□□□ 1.31
PCYT1A-212ENST00000460677 PPRC1Q5VV67 1664 aaKnown RBP23.21■■□□□ 1.31
PCYT1A-212ENST00000460677 MPHOSPH9Q99550 1183 aa23.19■■□□□ 1.3
PCYT1A-212ENST00000460677 ERBINQ96RT1 1412 aa23.19■■□□□ 1.3
PCYT1A-212ENST00000460677 TSPOAP1O95153 1857 aa23.17■■□□□ 1.3
PCYT1A-212ENST00000460677 MLH3Q9UHC1 1453 aa23.16■■□□□ 1.3
PCYT1A-212ENST00000460677 MYT1LQ9UL68 1186 aa23.15■■□□□ 1.3
PCYT1A-212ENST00000460677 KIDINS220Q9ULH0 1771 aa23.15■■□□□ 1.3
PCYT1A-212ENST00000460677 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
PCYT1A-212ENST00000460677 PZPP20742 1482 aa23.15■■□□□ 1.3
PCYT1A-212ENST00000460677 NUP155O75694 1391 aa23.13■■□□□ 1.29
PCYT1A-212ENST00000460677 HECW2Q9P2P5 1572 aa23.13■■□□□ 1.29
PCYT1A-212ENST00000460677 RAPGEF3O95398 923 aa23.13■■□□□ 1.29
PCYT1A-212ENST00000460677 SLC4A1APQ9BWU0 796 aaKnown RBP23.13■■□□□ 1.29
PCYT1A-212ENST00000460677 RICTORQ6R327 1708 aa23.12■■□□□ 1.29
PCYT1A-212ENST00000460677 UNC13BO14795 1591 aa23.11■■□□□ 1.29
PCYT1A-212ENST00000460677 DHX29Q7Z478 1369 aaKnown RBP23.1■■□□□ 1.29
PCYT1A-212ENST00000460677 SIN3AQ96ST3 1273 aa23.08■■□□□ 1.29
PCYT1A-212ENST00000460677 FRMPD1Q5SYB0 1578 aa23.07■■□□□ 1.28
PCYT1A-212ENST00000460677 MAGI2Q86UL8 1455 aa23.06■■□□□ 1.28
PCYT1A-212ENST00000460677 EIF2AK4Q9P2K8 1649 aaKnown RBP23.05■■□□□ 1.28
PCYT1A-212ENST00000460677 A2MP01023 1474 aa23.04■■□□□ 1.28
PCYT1A-212ENST00000460677 NEUROD1Q13562 356 aa23.04■■□□□ 1.28
PCYT1A-212ENST00000460677 ZMYM4Q5VZL5 1548 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms