RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 G3V3G9 751 aa11.16□□□□□ -0.62
VBP1-202ENST00000460509 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
VBP1-202ENST00000460509 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
VBP1-202ENST00000460509 LCE2DQ5TA82 110 aaPredicted RBP11.15□□□□□ -0.62
VBP1-202ENST00000460509 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
VBP1-202ENST00000460509 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
VBP1-202ENST00000460509 PDE4AP27815 886 aa11.12□□□□□ -0.63
VBP1-202ENST00000460509 NBR1Q14596 966 aa11.12□□□□□ -0.63
VBP1-202ENST00000460509 LARP6Q9BRS8 491 aaKnown RBP11.12□□□□□ -0.63
VBP1-202ENST00000460509 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
VBP1-202ENST00000460509 SLAIN1Q8ND83 568 aa11.1□□□□□ -0.63
VBP1-202ENST00000460509 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
VBP1-202ENST00000460509 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
VBP1-202ENST00000460509 P3H3Q8IVL6 736 aa11.08□□□□□ -0.64
VBP1-202ENST00000460509 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
VBP1-202ENST00000460509 DDX27Q96GQ7 796 aaKnown RBP11.05□□□□□ -0.64
VBP1-202ENST00000460509 CRISPLD2Q9H0B8 497 aa11.05□□□□□ -0.64
VBP1-202ENST00000460509 KCNV2Q8TDN2 545 aa11.04□□□□□ -0.64
VBP1-202ENST00000460509 E2F4Q16254 413 aa11.03□□□□□ -0.64
VBP1-202ENST00000460509 TMC2Q8TDI7 906 aa11.03□□□□□ -0.64
VBP1-202ENST00000460509 GPHNQ9NQX3 736 aaPredicted RBP11□□□□□ -0.65
VBP1-202ENST00000460509 MFSD10Q14728 455 aa10.99□□□□□ -0.65
VBP1-202ENST00000460509 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
VBP1-202ENST00000460509 PPP1R15BQ5SWA1 713 aa10.98□□□□□ -0.65
VBP1-202ENST00000460509 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
VBP1-202ENST00000460509 C3orf67Q6ZVT6 689 aa10.96□□□□□ -0.65
VBP1-202ENST00000460509 C2orf72A6NCS6 295 aa10.95□□□□□ -0.66
VBP1-202ENST00000460509 ST18O60284 1047 aa10.95□□□□□ -0.66
VBP1-202ENST00000460509 DSG2Q14126 1118 aa10.95□□□□□ -0.66
VBP1-202ENST00000460509 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
VBP1-202ENST00000460509 PLPP6Q8IY26 295 aa10.91□□□□□ -0.66
VBP1-202ENST00000460509 FOXK1P85037 733 aa10.9□□□□□ -0.66
VBP1-202ENST00000460509 TMEM92Q6UXU6 159 aa10.9□□□□□ -0.66
VBP1-202ENST00000460509 KIF3CO14782 793 aa10.88□□□□□ -0.67
VBP1-202ENST00000460509 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
VBP1-202ENST00000460509 CAMK2BQ13554 666 aa10.87□□□□□ -0.67
VBP1-202ENST00000460509 TPRNQ4KMQ1 711 aa10.87□□□□□ -0.67
VBP1-202ENST00000460509 SEMA3EO15041 775 aa10.84□□□□□ -0.67
VBP1-202ENST00000460509 DPYSL4O14531 572 aa10.83□□□□□ -0.68
VBP1-202ENST00000460509 SNPHO15079 494 aa10.83□□□□□ -0.68
VBP1-202ENST00000460509 CDAN1Q8IWY9 1227 aa10.83□□□□□ -0.68
VBP1-202ENST00000460509 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.68
VBP1-202ENST00000460509 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
VBP1-202ENST00000460509 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
VBP1-202ENST00000460509 MARVELD3Q96A59 401 aa10.81□□□□□ -0.68
VBP1-202ENST00000460509 MAP3K9P80192 1104 aa10.8□□□□□ -0.68
VBP1-202ENST00000460509 ARIH1Q9Y4X5 557 aaPredicted RBP10.79□□□□□ -0.68
VBP1-202ENST00000460509 TESPA1A2RU30 521 aaPredicted RBP10.75□□□□□ -0.69
VBP1-202ENST00000460509 SMYD5Q6GMV2 418 aa10.74□□□□□ -0.69
VBP1-202ENST00000460509 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
VBP1-202ENST00000460509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.74□□□□□ -0.69
VBP1-202ENST00000460509 SPDYE16A6NNV3 312 aaPredicted RBP10.73□□□□□ -0.69
VBP1-202ENST00000460509 TBC1D12O60347 775 aa10.72□□□□□ -0.69
VBP1-202ENST00000460509 MLLT3P42568 568 aaPredicted RBP10.71□□□□□ -0.69
VBP1-202ENST00000460509 PDIA6Q15084 440 aa10.71□□□□□ -0.69
VBP1-202ENST00000460509 OXER1Q8TDS5 423 aa10.71□□□□□ -0.69
VBP1-202ENST00000460509 EMP3P54852 163 aa10.7□□□□□ -0.7
VBP1-202ENST00000460509 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
VBP1-202ENST00000460509 GRXCR2A6NFK2 248 aa10.67□□□□□ -0.7
VBP1-202ENST00000460509 EVI5O60447 810 aa10.67□□□□□ -0.7
VBP1-202ENST00000460509 POTEB3A0JP26 581 aa10.66□□□□□ -0.7
VBP1-202ENST00000460509 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
VBP1-202ENST00000460509 POTEBQ6S5H4 581 aa10.66□□□□□ -0.7
VBP1-202ENST00000460509 PTCD2Q8WV60 388 aaKnown RBP10.66□□□□□ -0.7
VBP1-202ENST00000460509 FAM205CA6NFA0 338 aa10.64□□□□□ -0.71
VBP1-202ENST00000460509 SLC34A2O95436 690 aa10.64□□□□□ -0.71
VBP1-202ENST00000460509 DDX12PQ92771 950 aa10.64□□□□□ -0.71
VBP1-202ENST00000460509 RBM26Q5T8P6 1007 aaKnown RBP10.63□□□□□ -0.71
VBP1-202ENST00000460509 HS3ST6Q96QI5 342 aa10.63□□□□□ -0.71
VBP1-202ENST00000460509 PCDHGA4Q9Y5G9 962 aa10.63□□□□□ -0.71
VBP1-202ENST00000460509 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
VBP1-202ENST00000460509 ZNF710Q8N1W2 664 aa10.61□□□□□ -0.71
VBP1-202ENST00000460509 RIMBP2O15034 1052 aa10.59□□□□□ -0.71
VBP1-202ENST00000460509 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
VBP1-202ENST00000460509 ZC3H15Q8WU90 426 aaKnown RBP10.58□□□□□ -0.72
VBP1-202ENST00000460509 ARSIQ5FYB1 569 aa10.57□□□□□ -0.72
VBP1-202ENST00000460509 GPIHBP1Q8IV16 184 aa10.57□□□□□ -0.72
VBP1-202ENST00000460509 SPNS2Q8IVW8 549 aa10.57□□□□□ -0.72
VBP1-202ENST00000460509 KHSRPQ92945 711 aaKnown RBP eCLIP10.56□□□□□ -0.725e-6■□□□□ 8.2
VBP1-202ENST00000460509 NUTM2FA1L443 756 aa10.55□□□□□ -0.72
VBP1-202ENST00000460509 NUDT7P0C024 238 aa10.55□□□□□ -0.72
VBP1-202ENST00000460509 PTGER2P43116 358 aa10.55□□□□□ -0.72
VBP1-202ENST00000460509 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
VBP1-202ENST00000460509 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
VBP1-202ENST00000460509 OSBPP22059 807 aa10.53□□□□□ -0.72
VBP1-202ENST00000460509 MMRN1Q13201 1228 aa10.53□□□□□ -0.72
VBP1-202ENST00000460509 ANO8Q9HCE9 1232 aaPredicted RBP10.53□□□□□ -0.72
VBP1-202ENST00000460509 ERBB3P21860 1342 aa10.51□□□□□ -0.73
VBP1-202ENST00000460509 RBM33Q96EV2 1170 aaKnown RBP10.5□□□□□ -0.73
VBP1-202ENST00000460509 PHF14O94880 888 aa10.49□□□□□ -0.73
VBP1-202ENST00000460509 GPR153Q6NV75 609 aa10.49□□□□□ -0.73
VBP1-202ENST00000460509 KRI1Q8N9T8 703 aaKnown RBP10.49□□□□□ -0.73
VBP1-202ENST00000460509 ZSWIM6Q9HCJ5 1215 aa10.49□□□□□ -0.73
VBP1-202ENST00000460509 MAP3K7O43318 606 aa10.47□□□□□ -0.73
VBP1-202ENST00000460509 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
VBP1-202ENST00000460509 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
VBP1-202ENST00000460509 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
VBP1-202ENST00000460509 EPAS1Q99814 870 aa10.47□□□□□ -0.73
VBP1-202ENST00000460509 PCDHGA10Q9Y5H3 936 aa10.47□□□□□ -0.73
VBP1-202ENST00000460509 ZMYND10O75800 440 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms