RNA–Protein interactions for RNA: ENST00000460326.5

NUP58-205, Transcript of nucleoporin 58, humanhuman

TSL 2

Gene NUP58, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-205ENST00000460326 ARHGAP5Q13017 1502 aa22.38■■□□□ 1.17
NUP58-205ENST00000460326 DENND4BO75064 1496 aaPredicted RBP22.38■■□□□ 1.17
NUP58-205ENST00000460326 SCAPERQ9BY12 1400 aa22.37■■□□□ 1.17
NUP58-205ENST00000460326 ADGRL1O94910 1474 aa22.36■■□□□ 1.17
NUP58-205ENST00000460326 GPATCH8Q9UKJ3 1502 aaKnown RBP22.36■■□□□ 1.17
NUP58-205ENST00000460326 EHBP1L1Q8N3D4 1523 aa22.35■■□□□ 1.17
NUP58-205ENST00000460326 KDM4FA0A1W2PPD8 638 aa22.34■■□□□ 1.17
NUP58-205ENST00000460326 KANK4Q5T7N3 995 aaPredicted RBP22.33■■□□□ 1.17
NUP58-205ENST00000460326 ARHGEF12Q9NZN5 1544 aa22.31■■□□□ 1.16
NUP58-205ENST00000460326 LRRC9Q6ZRR7 1453 aa22.29■■□□□ 1.16
NUP58-205ENST00000460326 MAP3K1Q13233 1512 aa22.29■■□□□ 1.16
NUP58-205ENST00000460326 POGZQ7Z3K3 1410 aa22.29■■□□□ 1.16
NUP58-205ENST00000460326 SAMD9LQ8IVG5 1584 aa22.28■■□□□ 1.16
NUP58-205ENST00000460326 CCNB3Q8WWL7 1395 aa22.27■■□□□ 1.16
NUP58-205ENST00000460326 ZMYM4Q5VZL5 1548 aa22.27■■□□□ 1.16
NUP58-205ENST00000460326 SUPT6HQ7KZ85 1726 aaKnown RBP22.27■■□□□ 1.16
NUP58-205ENST00000460326 AFAP1Q8N556 730 aa22.27■■□□□ 1.16
NUP58-205ENST00000460326 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
NUP58-205ENST00000460326 ABCC1P33527 1531 aa22.26■■□□□ 1.15
NUP58-205ENST00000460326 ZNF777Q9ULD5 760 aaPredicted RBP22.26■■□□□ 1.15
NUP58-205ENST00000460326 NCOA2Q15596 1464 aa22.26■■□□□ 1.15
NUP58-205ENST00000460326 YEATS2Q9ULM3 1422 aa22.25■■□□□ 1.15
NUP58-205ENST00000460326 TRAPPC8Q9Y2L5 1435 aa22.24■■□□□ 1.15
NUP58-205ENST00000460326 CFDP1Q9UEE9 299 aaPredicted RBP22.23■■□□□ 1.15
NUP58-205ENST00000460326 SIGLEC1Q9BZZ2 1709 aa22.23■■□□□ 1.15
NUP58-205ENST00000460326 ZNF644Q9H582 1327 aaPredicted RBP22.22■■□□□ 1.15
NUP58-205ENST00000460326 ARHGEF40Q8TER5 1519 aa22.21■■□□□ 1.15
NUP58-205ENST00000460326 KDM5CP41229 1560 aa22.21■■□□□ 1.15
NUP58-205ENST00000460326 HNRNPMP52272 730 aaKnown RBP eCLIP22.2■■□□□ 1.14
NUP58-205ENST00000460326 ZNF518AQ6AHZ1 1483 aa22.2■■□□□ 1.14
NUP58-205ENST00000460326 ZFYVE16Q7Z3T8 1539 aa22.19■■□□□ 1.14
NUP58-205ENST00000460326 SYCP2Q9BX26 1530 aa22.18■■□□□ 1.14
NUP58-205ENST00000460326 MAGI2Q86UL8 1455 aa22.18■■□□□ 1.14
NUP58-205ENST00000460326 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
NUP58-205ENST00000460326 KIDINS220Q9ULH0 1771 aa22.14■■□□□ 1.13
NUP58-205ENST00000460326 KIAA1107Q9UPP5 1409 aa22.14■■□□□ 1.13
NUP58-205ENST00000460326 HECW2Q9P2P5 1572 aa22.13■■□□□ 1.13
NUP58-205ENST00000460326 APLP2Q06481 763 aa22.13■■□□□ 1.13
NUP58-205ENST00000460326 MLH3Q9UHC1 1453 aa22.12■■□□□ 1.13
NUP58-205ENST00000460326 BCORL1Q5H9F3 1711 aa22.11■■□□□ 1.13
NUP58-205ENST00000460326 MBD5Q9P267 1494 aa22.11■■□□□ 1.13
NUP58-205ENST00000460326 ABCA6Q8N139 1617 aa22.11■■□□□ 1.13
NUP58-205ENST00000460326 DIP2CQ9Y2E4 1556 aa22.11■■□□□ 1.13
NUP58-205ENST00000460326 ADAMTSL3P82987 1691 aa22.11■■□□□ 1.13
NUP58-205ENST00000460326 ATP10AO60312 1499 aa22.1■■□□□ 1.13
NUP58-205ENST00000460326 PLEKHH2Q8IVE3 1493 aa22.1■■□□□ 1.13
NUP58-205ENST00000460326 ARID4BQ4LE39 1312 aaPredicted RBP22.08■■□□□ 1.13
NUP58-205ENST00000460326 CAMSAP2Q08AD1 1489 aa22.08■■□□□ 1.12
NUP58-205ENST00000460326 MYT1LQ9UL68 1186 aa22.07■■□□□ 1.12
NUP58-205ENST00000460326 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
NUP58-205ENST00000460326 C9orf84Q5VXU9 1444 aa22.06■■□□□ 1.12
NUP58-205ENST00000460326 SPAG9O60271 1321 aaKnown RBP22.04■■□□□ 1.12
NUP58-205ENST00000460326 INO80Q9ULG1 1556 aaPredicted RBP22.04■■□□□ 1.12
NUP58-205ENST00000460326 MADDQ8WXG6 1647 aa22.02■■□□□ 1.11
NUP58-205ENST00000460326 ATP7AQ04656 1500 aa22.01■■□□□ 1.11
NUP58-205ENST00000460326 REREQ9P2R6 1566 aa22■■□□□ 1.11
NUP58-205ENST00000460326 MIA2Q96PC5 1412 aa22■■□□□ 1.11
NUP58-205ENST00000460326 MLECQ14165 292 aa22■■□□□ 1.11
NUP58-205ENST00000460326 ARHGEF5Q12774 1597 aa21.98■■□□□ 1.11
NUP58-205ENST00000460326 PPARGC1BQ86YN6 1023 aaKnown RBP21.97■■□□□ 1.11
NUP58-205ENST00000460326 CCDC141Q6ZP82 1450 aa21.96■■□□□ 1.11
NUP58-205ENST00000460326 RIMS1Q86UR5 1692 aaKnown RBP21.96■■□□□ 1.11
NUP58-205ENST00000460326 PTPN23Q9H3S7 1636 aa21.95■■□□□ 1.1
NUP58-205ENST00000460326 PTPRMP28827 1452 aa21.94■■□□□ 1.1
NUP58-205ENST00000460326 AGLP35573 1532 aa21.94■■□□□ 1.1
NUP58-205ENST00000460326 RTEL1-TNFRSF6BF6WH68 1400 aa21.93■■□□□ 1.1
NUP58-205ENST00000460326 RSPH4AQ5TD94 716 aa21.93■■□□□ 1.1
NUP58-205ENST00000460326 FGD6Q6ZV73 1430 aa21.93■■□□□ 1.1
NUP58-205ENST00000460326 ADGBQ8N7X0 1667 aa21.93■■□□□ 1.1
NUP58-205ENST00000460326 FER1L4A9Z1Z3 1794 aa21.92■■□□□ 1.1
NUP58-205ENST00000460326 PLXNC1O60486 1568 aa21.91■■□□□ 1.1
NUP58-205ENST00000460326 A2MP01023 1474 aa21.9■■□□□ 1.1
NUP58-205ENST00000460326 TCOF1Q13428 1488 aaKnown RBP21.9■■□□□ 1.1
NUP58-205ENST00000460326 MAST1Q9Y2H9 1570 aa21.87■■□□□ 1.09
NUP58-205ENST00000460326 TSPY4P0CV99 314 aa21.86■■□□□ 1.09
NUP58-205ENST00000460326 TSPY10P0CW01 314 aa21.86■■□□□ 1.09
NUP58-205ENST00000460326 ABCC5O15440 1437 aa21.86■■□□□ 1.09
NUP58-205ENST00000460326 CROCC2H7BZ55 1655 aa21.85■■□□□ 1.09
NUP58-205ENST00000460326 DHX29Q7Z478 1369 aaKnown RBP21.84■■□□□ 1.09
NUP58-205ENST00000460326 DNMT1P26358 1616 aaKnown RBP21.83■■□□□ 1.08
NUP58-205ENST00000460326 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
NUP58-205ENST00000460326 DAPK1P53355 1430 aa21.81■■□□□ 1.08
NUP58-205ENST00000460326 CEBPAP49715 358 aaPredicted RBP21.81■■□□□ 1.08
NUP58-205ENST00000460326 FAM50AQ14320 339 aaKnown RBP21.78■■□□□ 1.08
NUP58-205ENST00000460326 C3P01024 1663 aa21.77■■□□□ 1.08
NUP58-205ENST00000460326 GGT6Q6P531 493 aa21.77■■□□□ 1.08
NUP58-205ENST00000460326 SHANK2Q9UPX8 1470 aa21.76■■□□□ 1.07
NUP58-205ENST00000460326 KIF3BO15066 747 aa21.75■■□□□ 1.07
NUP58-205ENST00000460326 CHIC2Q9UKJ5 165 aa21.75■■□□□ 1.07
NUP58-205ENST00000460326 CLTCQ00610 1675 aaKnown RBP21.75■■□□□ 1.07
NUP58-205ENST00000460326 PTPRKQ15262 1439 aa21.72■■□□□ 1.07
NUP58-205ENST00000460326 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
NUP58-205ENST00000460326 MROH2AA6NES4 1674 aa21.7■■□□□ 1.06
NUP58-205ENST00000460326 KIF15Q9NS87 1388 aa21.69■■□□□ 1.06
NUP58-205ENST00000460326 DUOX2Q9NRD8 1548 aa21.69■■□□□ 1.06
NUP58-205ENST00000460326 ESF1Q9H501 851 aaKnown RBP21.68■■□□□ 1.06
NUP58-205ENST00000460326 ZMYM3Q14202 1370 aa21.68■■□□□ 1.06
NUP58-205ENST00000460326 NCOA1Q15788 1441 aa21.68■■□□□ 1.06
NUP58-205ENST00000460326 CNTLNQ9NXG0 1405 aa21.68■■□□□ 1.06
NUP58-205ENST00000460326 SETD1BQ9UPS6 1966 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1478.1 ms