RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 CDC42BPBQ9Y5S2 1711 aa33.69■■■□□ 2.98
ABCD4-202ENST00000460308 CCNB3Q8WWL7 1395 aa33.69■■■□□ 2.98
ABCD4-202ENST00000460308 SCAPERQ9BY12 1400 aa33.69■■■□□ 2.98
ABCD4-202ENST00000460308 PREX2Q70Z35 1606 aa33.68■■■□□ 2.98
ABCD4-202ENST00000460308 CDC42BPAQ5VT25 1732 aa33.66■■■□□ 2.98
ABCD4-202ENST00000460308 MAP3K1Q13233 1512 aa33.64■■■□□ 2.98
ABCD4-202ENST00000460308 GPATCH8Q9UKJ3 1502 aaKnown RBP33.63■■■□□ 2.97
ABCD4-202ENST00000460308 ZNF777Q9ULD5 760 aaPredicted RBP33.63■■■□□ 2.97
ABCD4-202ENST00000460308 CFDP1Q9UEE9 299 aaPredicted RBP33.62■■■□□ 2.97
ABCD4-202ENST00000460308 LRRC9Q6ZRR7 1453 aa33.61■■■□□ 2.97
ABCD4-202ENST00000460308 RICTORQ6R327 1708 aa33.6■■■□□ 2.97
ABCD4-202ENST00000460308 FRMPD1Q5SYB0 1578 aa33.6■■■□□ 2.97
ABCD4-202ENST00000460308 SUPT6HQ7KZ85 1726 aaKnown RBP33.59■■■□□ 2.97
ABCD4-202ENST00000460308 KANK4Q5T7N3 995 aaPredicted RBP33.58■■■□□ 2.97
ABCD4-202ENST00000460308 POGZQ7Z3K3 1410 aa33.56■■■□□ 2.96
ABCD4-202ENST00000460308 NCOA2Q15596 1464 aa33.55■■■□□ 2.96
ABCD4-202ENST00000460308 ITSN2Q9NZM3 1697 aa33.5■■■□□ 2.95
ABCD4-202ENST00000460308 AFAP1Q8N556 730 aa33.5■■■□□ 2.95
ABCD4-202ENST00000460308 ZNF518AQ6AHZ1 1483 aa33.5■■■□□ 2.95
ABCD4-202ENST00000460308 MYT1LQ9UL68 1186 aa33.49■■■□□ 2.95
ABCD4-202ENST00000460308 ABCC1P33527 1531 aa33.48■■■□□ 2.95
ABCD4-202ENST00000460308 AEBP2Q6ZN18 517 aaPredicted RBP33.48■■■□□ 2.95
ABCD4-202ENST00000460308 ZMYM4Q5VZL5 1548 aa33.48■■■□□ 2.95
ABCD4-202ENST00000460308 MAGI2Q86UL8 1455 aa33.47■■■□□ 2.95
ABCD4-202ENST00000460308 SAMD9LQ8IVG5 1584 aa33.46■■■□□ 2.95
ABCD4-202ENST00000460308 PLEKHH2Q8IVE3 1493 aa33.44■■■□□ 2.94
ABCD4-202ENST00000460308 ARHGEF12Q9NZN5 1544 aa33.43■■■□□ 2.94
ABCD4-202ENST00000460308 HNRNPMP52272 730 aaKnown RBP eCLIP33.43■■■□□ 2.94
ABCD4-202ENST00000460308 ZFYVE16Q7Z3T8 1539 aa33.43■■■□□ 2.94
ABCD4-202ENST00000460308 TRAPPC8Q9Y2L5 1435 aa33.42■■■□□ 2.94
ABCD4-202ENST00000460308 KDM4FA0A1W2PPD8 638 aa33.41■■■□□ 2.94
ABCD4-202ENST00000460308 ARHGEF40Q8TER5 1519 aa33.4■■■□□ 2.94
ABCD4-202ENST00000460308 KIAA1107Q9UPP5 1409 aa33.4■■■□□ 2.94
ABCD4-202ENST00000460308 ARID4BQ4LE39 1312 aaPredicted RBP33.39■■■□□ 2.94
ABCD4-202ENST00000460308 ZNF644Q9H582 1327 aaPredicted RBP33.39■■■□□ 2.94
ABCD4-202ENST00000460308 SYCP2Q9BX26 1530 aa33.38■■■□□ 2.93
ABCD4-202ENST00000460308 YEATS2Q9ULM3 1422 aa33.38■■■□□ 2.93
ABCD4-202ENST00000460308 KDM5CP41229 1560 aa33.37■■■□□ 2.93
ABCD4-202ENST00000460308 MLH3Q9UHC1 1453 aa33.31■■■□□ 2.92
ABCD4-202ENST00000460308 HECW2Q9P2P5 1572 aa33.31■■■□□ 2.92
ABCD4-202ENST00000460308 ATP10AO60312 1499 aa33.3■■■□□ 2.92
ABCD4-202ENST00000460308 SPAG9O60271 1321 aaKnown RBP33.29■■■□□ 2.92
ABCD4-202ENST00000460308 MYOM3Q5VTT5 1437 aa33.29■■■□□ 2.92
ABCD4-202ENST00000460308 CAMSAP2Q08AD1 1489 aa33.27■■■□□ 2.92
ABCD4-202ENST00000460308 RSPH4AQ5TD94 716 aa33.25■■■□□ 2.91
ABCD4-202ENST00000460308 C9orf84Q5VXU9 1444 aa33.25■■■□□ 2.91
ABCD4-202ENST00000460308 MIA2Q96PC5 1412 aa33.25■■■□□ 2.91
ABCD4-202ENST00000460308 MBD5Q9P267 1494 aa33.23■■■□□ 2.91
ABCD4-202ENST00000460308 KIDINS220Q9ULH0 1771 aa33.19■■■□□ 2.9
ABCD4-202ENST00000460308 DIP2CQ9Y2E4 1556 aa33.19■■■□□ 2.9
ABCD4-202ENST00000460308 ABCA6Q8N139 1617 aa33.17■■■□□ 2.9
ABCD4-202ENST00000460308 CCDC141Q6ZP82 1450 aa33.16■■■□□ 2.9
ABCD4-202ENST00000460308 TSPY4P0CV99 314 aa33.15■■■□□ 2.9
ABCD4-202ENST00000460308 TSPY10P0CW01 314 aa33.15■■■□□ 2.9
ABCD4-202ENST00000460308 ATP7AQ04656 1500 aa33.15■■■□□ 2.9
ABCD4-202ENST00000460308 MLECQ14165 292 aa33.15■■■□□ 2.9
ABCD4-202ENST00000460308 BCORL1Q5H9F3 1711 aa33.15■■■□□ 2.9
ABCD4-202ENST00000460308 SIGLEC1Q9BZZ2 1709 aa33.11■■■□□ 2.89
ABCD4-202ENST00000460308 ARHGEF5Q12774 1597 aa33.1■■■□□ 2.89
ABCD4-202ENST00000460308 INO80Q9ULG1 1556 aaPredicted RBP33.1■■■□□ 2.89
ABCD4-202ENST00000460308 PPARGC1BQ86YN6 1023 aaKnown RBP33.1■■■□□ 2.89
ABCD4-202ENST00000460308 ADAMTSL3P82987 1691 aa33.1■■■□□ 2.89
ABCD4-202ENST00000460308 RTEL1-TNFRSF6BF6WH68 1400 aa33.09■■■□□ 2.89
ABCD4-202ENST00000460308 FGD6Q6ZV73 1430 aa33.09■■■□□ 2.89
ABCD4-202ENST00000460308 REREQ9P2R6 1566 aa33.09■■■□□ 2.89
ABCD4-202ENST00000460308 PTPN23Q9H3S7 1636 aa33.07■■■□□ 2.88
ABCD4-202ENST00000460308 MADDQ8WXG6 1647 aa33.02■■■□□ 2.88
ABCD4-202ENST00000460308 AGLP35573 1532 aa33.01■■■□□ 2.87
ABCD4-202ENST00000460308 A2MP01023 1474 aa33■■■□□ 2.87
ABCD4-202ENST00000460308 TCOF1Q13428 1488 aaKnown RBP32.99■■■□□ 2.87
ABCD4-202ENST00000460308 ADGBQ8N7X0 1667 aa32.98■■■□□ 2.87
ABCD4-202ENST00000460308 FAM50AQ14320 339 aaKnown RBP32.98■■■□□ 2.87
ABCD4-202ENST00000460308 PTPRMP28827 1452 aa32.96■■■□□ 2.87
ABCD4-202ENST00000460308 ESF1Q9H501 851 aaKnown RBP32.95■■■□□ 2.87
ABCD4-202ENST00000460308 RIMS1Q86UR5 1692 aaKnown RBP32.94■■■□□ 2.86
ABCD4-202ENST00000460308 DHX29Q7Z478 1369 aaKnown RBP32.93■■■□□ 2.86
ABCD4-202ENST00000460308 FER1L4A9Z1Z3 1794 aa32.92■■■□□ 2.86
ABCD4-202ENST00000460308 MAST1Q9Y2H9 1570 aa32.92■■■□□ 2.86
ABCD4-202ENST00000460308 ABCC5O15440 1437 aa32.91■■■□□ 2.86
ABCD4-202ENST00000460308 PLPPR3Q6T4P5 718 aa32.9■■■□□ 2.86
ABCD4-202ENST00000460308 PLXNC1O60486 1568 aa32.89■■■□□ 2.86
ABCD4-202ENST00000460308 DAPK1P53355 1430 aa32.89■■■□□ 2.86
ABCD4-202ENST00000460308 DNMT1P26358 1616 aaKnown RBP32.87■■■□□ 2.85
ABCD4-202ENST00000460308 GGT6Q6P531 493 aa32.86■■■□□ 2.85
ABCD4-202ENST00000460308 SHANK2Q9UPX8 1470 aa32.84■■■□□ 2.85
ABCD4-202ENST00000460308 CROCC2H7BZ55 1655 aa32.83■■■□□ 2.85
ABCD4-202ENST00000460308 KIF3BO15066 747 aa32.83■■■□□ 2.85
ABCD4-202ENST00000460308 CHIC2Q9UKJ5 165 aa32.83■■■□□ 2.85
ABCD4-202ENST00000460308 RRP7BPQ9NSQ0 103 aa32.79■■■□□ 2.84
ABCD4-202ENST00000460308 PPP6R1Q9UPN7 881 aa32.77■■■□□ 2.84
ABCD4-202ENST00000460308 CNTLNQ9NXG0 1405 aa32.77■■■□□ 2.84
ABCD4-202ENST00000460308 ANKRD30AQ9BXX3 1397 aa32.76■■■□□ 2.83
ABCD4-202ENST00000460308 CEBPAP49715 358 aaPredicted RBP32.75■■■□□ 2.83
ABCD4-202ENST00000460308 KIF15Q9NS87 1388 aa32.74■■■□□ 2.83
ABCD4-202ENST00000460308 DUOX2Q9NRD8 1548 aa32.72■■■□□ 2.83
ABCD4-202ENST00000460308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.69■■■□□ 2.82
ABCD4-202ENST00000460308 ITGAEP38570 1179 aa32.68■■■□□ 2.82
ABCD4-202ENST00000460308 NCOA1Q15788 1441 aa32.67■■■□□ 2.82
ABCD4-202ENST00000460308 ZMYM3Q14202 1370 aa32.65■■■□□ 2.82
ABCD4-202ENST00000460308 CLTCQ00610 1675 aaKnown RBP32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms