RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 CFDP1Q9UEE9 299 aaPredicted RBP33.34■■■□□ 2.93
LCNL1-203ENST00000460177 ZNF644Q9H582 1327 aaPredicted RBP33.32■■■□□ 2.92
LCNL1-203ENST00000460177 MYO5CQ9NQX4 1742 aa33.32■■■□□ 2.92
LCNL1-203ENST00000460177 HFM1A2PYH4 1435 aa33.31■■■□□ 2.92
LCNL1-203ENST00000460177 DAPK1P53355 1430 aa33.31■■■□□ 2.92
LCNL1-203ENST00000460177 GCC2Q8IWJ2 1684 aa33.3■■■□□ 2.92
LCNL1-203ENST00000460177 CROCC2H7BZ55 1655 aa33.29■■■□□ 2.92
LCNL1-203ENST00000460177 DHX57Q6P158 1386 aaKnown RBP33.28■■■□□ 2.92
LCNL1-203ENST00000460177 WDR7Q9Y4E6 1490 aa33.27■■■□□ 2.92
LCNL1-203ENST00000460177 ABCC5O15440 1437 aa33.26■■■□□ 2.92
LCNL1-203ENST00000460177 AKNAQ7Z591 1439 aa33.26■■■□□ 2.92
LCNL1-203ENST00000460177 NAIPQ13075 1403 aa33.24■■■□□ 2.91
LCNL1-203ENST00000460177 SAMD9LQ8IVG5 1584 aa33.23■■■□□ 2.91
LCNL1-203ENST00000460177 DNAJC5Q9H3Z4 198 aa33.22■■■□□ 2.91
LCNL1-203ENST00000460177 ADGBQ8N7X0 1667 aa33.2■■■□□ 2.91
LCNL1-203ENST00000460177 ZNF777Q9ULD5 760 aaPredicted RBP33.19■■■□□ 2.9
LCNL1-203ENST00000460177 ARHGAP5Q13017 1502 aa33.18■■■□□ 2.9
LCNL1-203ENST00000460177 ASXL2Q76L83 1435 aa33.17■■■□□ 2.9
LCNL1-203ENST00000460177 KCNH8Q96L42 1107 aa33.17■■■□□ 2.9
LCNL1-203ENST00000460177 ARHGEF5Q12774 1597 aa33.16■■■□□ 2.9
LCNL1-203ENST00000460177 ROCK1Q13464 1354 aa33.15■■■□□ 2.9
LCNL1-203ENST00000460177 CHIC2Q9UKJ5 165 aa33.14■■■□□ 2.9
LCNL1-203ENST00000460177 ABCA9Q8IUA7 1624 aa33.13■■■□□ 2.89
LCNL1-203ENST00000460177 SHANK2Q9UPX8 1470 aa33.11■■■□□ 2.89
LCNL1-203ENST00000460177 PLCH2O75038 1416 aa33.11■■■□□ 2.89
LCNL1-203ENST00000460177 ARAP3Q8WWN8 1544 aa33.09■■■□□ 2.89
LCNL1-203ENST00000460177 ADGRL2O95490 1459 aa33.09■■■□□ 2.89
LCNL1-203ENST00000460177 CLSPNQ9HAW4 1339 aa33.09■■■□□ 2.89
LCNL1-203ENST00000460177 MBD5Q9P267 1494 aa33.08■■■□□ 2.89
LCNL1-203ENST00000460177 RRP7BPQ9NSQ0 103 aa33.08■■■□□ 2.89
LCNL1-203ENST00000460177 KDM6BO15054 1643 aa33.07■■■□□ 2.89
LCNL1-203ENST00000460177 NPM1P06748 294 aaKnown RBP eCLIP33.07■■■□□ 2.88
LCNL1-203ENST00000460177 SYCP2Q9BX26 1530 aa33.06■■■□□ 2.88
LCNL1-203ENST00000460177 MAPKBP1O60336 1514 aa33.04■■■□□ 2.88
LCNL1-203ENST00000460177 PLEKHH2Q8IVE3 1493 aa33.03■■■□□ 2.88
LCNL1-203ENST00000460177 CCDC141Q6ZP82 1450 aa33.02■■■□□ 2.88
LCNL1-203ENST00000460177 C9orf84Q5VXU9 1444 aa32.99■■■□□ 2.87
LCNL1-203ENST00000460177 ABCC1P33527 1531 aa32.99■■■□□ 2.87
LCNL1-203ENST00000460177 NCOA1Q15788 1441 aa32.98■■■□□ 2.87
LCNL1-203ENST00000460177 KIAA1107Q9UPP5 1409 aa32.98■■■□□ 2.87
LCNL1-203ENST00000460177 HNRNPMP52272 730 aaKnown RBP eCLIP32.96■■■□□ 2.87
LCNL1-203ENST00000460177 MAST1Q9Y2H9 1570 aa32.95■■■□□ 2.87
LCNL1-203ENST00000460177 ANKRD30AQ9BXX3 1397 aa32.93■■■□□ 2.86
LCNL1-203ENST00000460177 ARHGEF12Q9NZN5 1544 aa32.93■■■□□ 2.86
LCNL1-203ENST00000460177 EFCAB2Q5VUJ9 269 aa32.92■■■□□ 2.86
LCNL1-203ENST00000460177 RSPH4AQ5TD94 716 aa32.89■■■□□ 2.86
LCNL1-203ENST00000460177 FANCAO15360 1455 aa32.87■■■□□ 2.85
LCNL1-203ENST00000460177 TSPY4P0CV99 314 aa32.85■■■□□ 2.85
LCNL1-203ENST00000460177 TSPY10P0CW01 314 aa32.85■■■□□ 2.85
LCNL1-203ENST00000460177 PLXNC1O60486 1568 aa32.82■■■□□ 2.84
LCNL1-203ENST00000460177 CFAP74Q9C0B2 1584 aa32.8■■■□□ 2.84
LCNL1-203ENST00000460177 ACIN1Q9UKV3 1341 aaKnown RBP32.78■■■□□ 2.84
LCNL1-203ENST00000460177 TRAPPC8Q9Y2L5 1435 aa32.78■■■□□ 2.84
LCNL1-203ENST00000460177 ANKRD50Q9ULJ7 1429 aa32.77■■■□□ 2.84
LCNL1-203ENST00000460177 KIF15Q9NS87 1388 aa32.77■■■□□ 2.84
LCNL1-203ENST00000460177 DENND4BO75064 1496 aaPredicted RBP32.75■■■□□ 2.83
LCNL1-203ENST00000460177 CD109Q6YHK3 1445 aa32.75■■■□□ 2.83
LCNL1-203ENST00000460177 ADGRL1O94910 1474 aa32.73■■■□□ 2.83
LCNL1-203ENST00000460177 MAP3K4Q9Y6R4 1608 aa32.73■■■□□ 2.83
LCNL1-203ENST00000460177 GLI2P10070 1586 aa32.72■■■□□ 2.83
LCNL1-203ENST00000460177 TRIM52Q96A61 297 aa32.72■■■□□ 2.83
LCNL1-203ENST00000460177 ZFYVE16Q7Z3T8 1539 aa32.69■■■□□ 2.82
LCNL1-203ENST00000460177 DIP2BQ9P265 1576 aa32.68■■■□□ 2.82
LCNL1-203ENST00000460177 INO80Q9ULG1 1556 aaPredicted RBP32.66■■■□□ 2.82
LCNL1-203ENST00000460177 PZPP20742 1482 aa32.65■■■□□ 2.82
LCNL1-203ENST00000460177 SCAPERQ9BY12 1400 aa32.65■■■□□ 2.82
LCNL1-203ENST00000460177 KDM5DQ9BY66 1539 aa32.63■■■□□ 2.81
LCNL1-203ENST00000460177 RTEL1-TNFRSF6BF6WH68 1400 aa32.63■■■□□ 2.81
LCNL1-203ENST00000460177 DUOX2Q9NRD8 1548 aa32.63■■■□□ 2.81
LCNL1-203ENST00000460177 MPHOSPH9Q99550 1183 aa32.62■■■□□ 2.81
LCNL1-203ENST00000460177 KIF13AQ9H1H9 1805 aa32.59■■■□□ 2.81
LCNL1-203ENST00000460177 ATP7AQ04656 1500 aa32.59■■■□□ 2.81
LCNL1-203ENST00000460177 NEO1Q92859 1461 aa32.59■■■□□ 2.81
LCNL1-203ENST00000460177 FAM69CQ0P6D2 419 aa32.59■■■□□ 2.81
LCNL1-203ENST00000460177 SIN3AQ96ST3 1273 aa32.59■■■□□ 2.81
LCNL1-203ENST00000460177 UNC13BO14795 1591 aa32.58■■■□□ 2.81
LCNL1-203ENST00000460177 SPAG9O60271 1321 aaKnown RBP32.57■■■□□ 2.8
LCNL1-203ENST00000460177 AFAP1Q8N556 730 aa32.57■■■□□ 2.8
LCNL1-203ENST00000460177 ERBINQ96RT1 1412 aa32.55■■■□□ 2.8
LCNL1-203ENST00000460177 ZNF518AQ6AHZ1 1483 aa32.54■■■□□ 2.8
LCNL1-203ENST00000460177 KDM5CP41229 1560 aa32.53■■■□□ 2.8
LCNL1-203ENST00000460177 POGZQ7Z3K3 1410 aa32.52■■■□□ 2.8
LCNL1-203ENST00000460177 KIDINS220Q9ULH0 1771 aa32.5■■■□□ 2.79
LCNL1-203ENST00000460177 NEUROD1Q13562 356 aa32.5■■■□□ 2.79
LCNL1-203ENST00000460177 SLC4A1APQ9BWU0 796 aaKnown RBP32.49■■■□□ 2.79
LCNL1-203ENST00000460177 PPRC1Q5VV67 1664 aaKnown RBP32.47■■■□□ 2.79
LCNL1-203ENST00000460177 TSPOAP1O95153 1857 aa32.47■■■□□ 2.79
LCNL1-203ENST00000460177 NUP155O75694 1391 aa32.47■■■□□ 2.79
LCNL1-203ENST00000460177 MAGI2Q86UL8 1455 aa32.46■■■□□ 2.79
LCNL1-203ENST00000460177 HECW2Q9P2P5 1572 aa32.44■■■□□ 2.78
LCNL1-203ENST00000460177 IQGAP3Q86VI3 1631 aa32.44■■■□□ 2.78
LCNL1-203ENST00000460177 TIMELESSQ9UNS1 1208 aa32.43■■■□□ 2.78
LCNL1-203ENST00000460177 ANKRD30BQ9BXX2 1392 aa32.43■■■□□ 2.78
LCNL1-203ENST00000460177 FAM135AQ9P2D6 1515 aa32.43■■■□□ 2.78
LCNL1-203ENST00000460177 FOXD1Q16676 465 aa32.43■■■□□ 2.78
LCNL1-203ENST00000460177 RICTORQ6R327 1708 aa32.42■■■□□ 2.78
LCNL1-203ENST00000460177 EIF2AK4Q9P2K8 1649 aaKnown RBP32.4■■■□□ 2.78
LCNL1-203ENST00000460177 DEPDC5O75140 1603 aa32.38■■■□□ 2.77
LCNL1-203ENST00000460177 MLH3Q9UHC1 1453 aa32.38■■■□□ 2.77
LCNL1-203ENST00000460177 TONSLQ96HA7 1378 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms