RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 RICTORQ6R327 1708 aa20.3■□□□□ 0.84
COL18A1-206ENST00000459895 PLCH2O75038 1416 aa20.29■□□□□ 0.84
COL18A1-206ENST00000459895 SAMD9LQ8IVG5 1584 aa20.29■□□□□ 0.84
COL18A1-206ENST00000459895 ABCC1P33527 1531 aa20.28■□□□□ 0.84
COL18A1-206ENST00000459895 COL17A1Q9UMD9 1497 aaPredicted RBP20.28■□□□□ 0.84
COL18A1-206ENST00000459895 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
COL18A1-206ENST00000459895 ADGRL1O94910 1474 aa20.24■□□□□ 0.83
COL18A1-206ENST00000459895 AKNAQ7Z591 1439 aa20.22■□□□□ 0.83
COL18A1-206ENST00000459895 KANK4Q5T7N3 995 aaPredicted RBP20.21■□□□□ 0.83
COL18A1-206ENST00000459895 SYCP2Q9BX26 1530 aa20.21■□□□□ 0.83
COL18A1-206ENST00000459895 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
COL18A1-206ENST00000459895 ZMYM4Q5VZL5 1548 aa20.2■□□□□ 0.82
COL18A1-206ENST00000459895 POGZQ7Z3K3 1410 aa20.19■□□□□ 0.82
COL18A1-206ENST00000459895 ARHGEF40Q8TER5 1519 aa20.17■□□□□ 0.82
COL18A1-206ENST00000459895 KDM5CP41229 1560 aa20.17■□□□□ 0.82
COL18A1-206ENST00000459895 PHLDB1Q86UU1 1377 aa20.17■□□□□ 0.82
COL18A1-206ENST00000459895 DENND4BO75064 1496 aaPredicted RBP20.16■□□□□ 0.82
COL18A1-206ENST00000459895 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
COL18A1-206ENST00000459895 ARHGEF12Q9NZN5 1544 aa20.16■□□□□ 0.82
COL18A1-206ENST00000459895 HECW2Q9P2P5 1572 aa20.14■□□□□ 0.81
COL18A1-206ENST00000459895 MYOM3Q5VTT5 1437 aa20.14■□□□□ 0.81
COL18A1-206ENST00000459895 APLP2Q06481 763 aa20.14■□□□□ 0.81
COL18A1-206ENST00000459895 SCAPERQ9BY12 1400 aa20.12■□□□□ 0.81
COL18A1-206ENST00000459895 ZNF518AQ6AHZ1 1483 aa20.11■□□□□ 0.81
COL18A1-206ENST00000459895 CROCC2H7BZ55 1655 aa20.1■□□□□ 0.81
COL18A1-206ENST00000459895 PTPN23Q9H3S7 1636 aa20.1■□□□□ 0.81
COL18A1-206ENST00000459895 INO80Q9ULG1 1556 aaPredicted RBP20.1■□□□□ 0.81
COL18A1-206ENST00000459895 EFCAB2Q5VUJ9 269 aa20.09■□□□□ 0.81
COL18A1-206ENST00000459895 PLEKHH2Q8IVE3 1493 aa20.09■□□□□ 0.81
COL18A1-206ENST00000459895 ABCA6Q8N139 1617 aa20.09■□□□□ 0.81
COL18A1-206ENST00000459895 ZFYVE16Q7Z3T8 1539 aa20.08■□□□□ 0.81
COL18A1-206ENST00000459895 TRAPPC8Q9Y2L5 1435 aa20.07■□□□□ 0.8
COL18A1-206ENST00000459895 SIGLEC1Q9BZZ2 1709 aa20.07■□□□□ 0.8
COL18A1-206ENST00000459895 ARHGEF5Q12774 1597 aa20.06■□□□□ 0.8
COL18A1-206ENST00000459895 KIDINS220Q9ULH0 1771 aa20.06■□□□□ 0.8
COL18A1-206ENST00000459895 DIP2CQ9Y2E4 1556 aa20.05■□□□□ 0.8
COL18A1-206ENST00000459895 FGD6Q6ZV73 1430 aa20.05■□□□□ 0.8
COL18A1-206ENST00000459895 MIA2Q96PC5 1412 aa20.05■□□□□ 0.8
COL18A1-206ENST00000459895 RAPGEF3O95398 923 aa20.05■□□□□ 0.8
COL18A1-206ENST00000459895 CFDP1Q9UEE9 299 aaPredicted RBP20.05■□□□□ 0.8
COL18A1-206ENST00000459895 KIAA1107Q9UPP5 1409 aa20.03■□□□□ 0.8
COL18A1-206ENST00000459895 TCOF1Q13428 1488 aaKnown RBP20.03■□□□□ 0.8
COL18A1-206ENST00000459895 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
COL18A1-206ENST00000459895 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
COL18A1-206ENST00000459895 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.8
COL18A1-206ENST00000459895 CCDC141Q6ZP82 1450 aa20.02■□□□□ 0.8
COL18A1-206ENST00000459895 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.79
COL18A1-206ENST00000459895 YEATS2Q9ULM3 1422 aa20.02■□□□□ 0.79
COL18A1-206ENST00000459895 ZNF644Q9H582 1327 aaPredicted RBP20.02■□□□□ 0.79
COL18A1-206ENST00000459895 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
COL18A1-206ENST00000459895 MAGI2Q86UL8 1455 aa19.99■□□□□ 0.79
COL18A1-206ENST00000459895 MLH3Q9UHC1 1453 aa19.98■□□□□ 0.79
COL18A1-206ENST00000459895 MAST1Q9Y2H9 1570 aa19.97■□□□□ 0.79
COL18A1-206ENST00000459895 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
COL18A1-206ENST00000459895 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
COL18A1-206ENST00000459895 PLXNC1O60486 1568 aa19.94■□□□□ 0.78
COL18A1-206ENST00000459895 SHANK2Q9UPX8 1470 aa19.92■□□□□ 0.78
COL18A1-206ENST00000459895 HNRNPMP52272 730 aaKnown RBP eCLIP19.92■□□□□ 0.78
COL18A1-206ENST00000459895 AFAP1Q8N556 730 aa19.92■□□□□ 0.78
COL18A1-206ENST00000459895 C9orf84Q5VXU9 1444 aa19.92■□□□□ 0.78
COL18A1-206ENST00000459895 BCORL1Q5H9F3 1711 aa19.9■□□□□ 0.78
COL18A1-206ENST00000459895 DAPK1P53355 1430 aa19.89■□□□□ 0.77
COL18A1-206ENST00000459895 ATP10AO60312 1499 aa19.87■□□□□ 0.77
COL18A1-206ENST00000459895 ABCC5O15440 1437 aa19.86■□□□□ 0.77
COL18A1-206ENST00000459895 RRBP1Q9P2E9 1410 aaKnown RBP19.85■□□□□ 0.77
COL18A1-206ENST00000459895 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
COL18A1-206ENST00000459895 RTEL1-TNFRSF6BF6WH68 1400 aa19.85■□□□□ 0.77
COL18A1-206ENST00000459895 ADAMTSL3P82987 1691 aa19.84■□□□□ 0.77
COL18A1-206ENST00000459895 MADDQ8WXG6 1647 aa19.84■□□□□ 0.77
COL18A1-206ENST00000459895 FER1L4A9Z1Z3 1794 aa19.83■□□□□ 0.77
COL18A1-206ENST00000459895 AGLP35573 1532 aa19.82■□□□□ 0.76
COL18A1-206ENST00000459895 A2MP01023 1474 aa19.81■□□□□ 0.76
COL18A1-206ENST00000459895 EIF2AK4Q9P2K8 1649 aaKnown RBP19.8■□□□□ 0.76
COL18A1-206ENST00000459895 ADGRL2O95490 1459 aa19.79■□□□□ 0.76
COL18A1-206ENST00000459895 RIMS1Q86UR5 1692 aaKnown RBP19.79■□□□□ 0.76
COL18A1-206ENST00000459895 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
COL18A1-206ENST00000459895 FAM50AQ14320 339 aaKnown RBP19.77■□□□□ 0.76
COL18A1-206ENST00000459895 RNF17Q9BXT8 1623 aaKnown RBP19.76■□□□□ 0.75
COL18A1-206ENST00000459895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.76■□□□□ 0.753e-15■□□□□ 9.5
COL18A1-206ENST00000459895 PTPRKQ15262 1439 aa19.76■□□□□ 0.75
COL18A1-206ENST00000459895 DUOX2Q9NRD8 1548 aa19.75■□□□□ 0.75
COL18A1-206ENST00000459895 GCC2Q8IWJ2 1684 aa19.74■□□□□ 0.75
COL18A1-206ENST00000459895 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
COL18A1-206ENST00000459895 RSPH4AQ5TD94 716 aa19.73■□□□□ 0.75
COL18A1-206ENST00000459895 DEPDC5O75140 1603 aa19.72■□□□□ 0.75
COL18A1-206ENST00000459895 KIF15Q9NS87 1388 aa19.71■□□□□ 0.75
COL18A1-206ENST00000459895 ARID4BQ4LE39 1312 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-206ENST00000459895 CLTCQ00610 1675 aaKnown RBP19.69■□□□□ 0.74
COL18A1-206ENST00000459895 TSPY4P0CV99 314 aa19.69■□□□□ 0.74
COL18A1-206ENST00000459895 TSPY10P0CW01 314 aa19.69■□□□□ 0.74
COL18A1-206ENST00000459895 MROH2AA6NES4 1674 aa19.68■□□□□ 0.74
COL18A1-206ENST00000459895 ERBINQ96RT1 1412 aa19.68■□□□□ 0.74
COL18A1-206ENST00000459895 PRDM15P57071 1507 aaPredicted RBP19.68■□□□□ 0.74
COL18A1-206ENST00000459895 ZC3H13Q5T200 1668 aaKnown RBP19.68■□□□□ 0.74
COL18A1-206ENST00000459895 DHX29Q7Z478 1369 aaKnown RBP19.68■□□□□ 0.74
COL18A1-206ENST00000459895 NCOA1Q15788 1441 aa19.68■□□□□ 0.74
COL18A1-206ENST00000459895 CEP152O94986 1710 aa19.67■□□□□ 0.74
COL18A1-206ENST00000459895 KDM4FA0A1W2PPD8 638 aa19.66■□□□□ 0.74
COL18A1-206ENST00000459895 ANKRD30AQ9BXX3 1397 aa19.66■□□□□ 0.74
COL18A1-206ENST00000459895 C3P01024 1663 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms