RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 ARHGAP5Q13017 1502 aa14.51□□□□□ -0.09
PCCB-202ENST00000459873 PLCH2O75038 1416 aa14.51□□□□□ -0.09
PCCB-202ENST00000459873 RICTORQ6R327 1708 aa14.51□□□□□ -0.09
PCCB-202ENST00000459873 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
PCCB-202ENST00000459873 GPATCH8Q9UKJ3 1502 aaKnown RBP14.49□□□□□ -0.09
PCCB-202ENST00000459873 COL17A1Q9UMD9 1497 aaPredicted RBP14.46□□□□□ -0.09
PCCB-202ENST00000459873 ZMYM4Q5VZL5 1548 aa14.46□□□□□ -0.1
PCCB-202ENST00000459873 ADGRL1O94910 1474 aa14.45□□□□□ -0.1
PCCB-202ENST00000459873 KDM5CP41229 1560 aa14.44□□□□□ -0.1
PCCB-202ENST00000459873 SYCP2Q9BX26 1530 aa14.44□□□□□ -0.1
PCCB-202ENST00000459873 PHLDB1Q86UU1 1377 aa14.44□□□□□ -0.1
PCCB-202ENST00000459873 POGZQ7Z3K3 1410 aa14.43□□□□□ -0.1
PCCB-202ENST00000459873 AKNAQ7Z591 1439 aa14.43□□□□□ -0.1
PCCB-202ENST00000459873 KANK4Q5T7N3 995 aaPredicted RBP14.43□□□□□ -0.1
PCCB-202ENST00000459873 CCNB3Q8WWL7 1395 aa14.43□□□□□ -0.1
PCCB-202ENST00000459873 ARHGEF40Q8TER5 1519 aa14.42□□□□□ -0.1
PCCB-202ENST00000459873 MYOM3Q5VTT5 1437 aa14.41□□□□□ -0.1
PCCB-202ENST00000459873 CAMSAP2Q08AD1 1489 aa14.41□□□□□ -0.1
PCCB-202ENST00000459873 HECW2Q9P2P5 1572 aa14.4□□□□□ -0.1
PCCB-202ENST00000459873 ARHGEF12Q9NZN5 1544 aa14.4□□□□□ -0.1
PCCB-202ENST00000459873 CROCC2H7BZ55 1655 aa14.39□□□□□ -0.11
PCCB-202ENST00000459873 INO80Q9ULG1 1556 aaPredicted RBP14.39□□□□□ -0.11
PCCB-202ENST00000459873 DENND4BO75064 1496 aaPredicted RBP14.39□□□□□ -0.11
PCCB-202ENST00000459873 ZNF518AQ6AHZ1 1483 aa14.38□□□□□ -0.11
PCCB-202ENST00000459873 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
PCCB-202ENST00000459873 PTPN23Q9H3S7 1636 aa14.38□□□□□ -0.11
PCCB-202ENST00000459873 ARHGEF5Q12774 1597 aa14.38□□□□□ -0.11
PCCB-202ENST00000459873 APLP2Q06481 763 aa14.37□□□□□ -0.11
PCCB-202ENST00000459873 MIA2Q96PC5 1412 aa14.37□□□□□ -0.11
PCCB-202ENST00000459873 ZFYVE16Q7Z3T8 1539 aa14.36□□□□□ -0.11
PCCB-202ENST00000459873 TCOF1Q13428 1488 aaKnown RBP14.36□□□□□ -0.11
PCCB-202ENST00000459873 FGD6Q6ZV73 1430 aa14.35□□□□□ -0.11
PCCB-202ENST00000459873 SCAPERQ9BY12 1400 aa14.35□□□□□ -0.11
PCCB-202ENST00000459873 KIAA1107Q9UPP5 1409 aa14.35□□□□□ -0.11
PCCB-202ENST00000459873 ABCA6Q8N139 1617 aa14.35□□□□□ -0.11
PCCB-202ENST00000459873 EFCAB2Q5VUJ9 269 aa14.34□□□□□ -0.11
PCCB-202ENST00000459873 MBD5Q9P267 1494 aa14.33□□□□□ -0.12
PCCB-202ENST00000459873 KIDINS220Q9ULH0 1771 aa14.33□□□□□ -0.12
PCCB-202ENST00000459873 DIP2CQ9Y2E4 1556 aa14.33□□□□□ -0.12
PCCB-202ENST00000459873 DNMT1P26358 1616 aaKnown RBP14.33□□□□□ -0.12
PCCB-202ENST00000459873 TRAPPC8Q9Y2L5 1435 aa14.32□□□□□ -0.12
PCCB-202ENST00000459873 CCDC141Q6ZP82 1450 aa14.32□□□□□ -0.12
PCCB-202ENST00000459873 SIGLEC1Q9BZZ2 1709 aa14.32□□□□□ -0.12
PCCB-202ENST00000459873 MAGI2Q86UL8 1455 aa14.31□□□□□ -0.12
PCCB-202ENST00000459873 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
PCCB-202ENST00000459873 MAST1Q9Y2H9 1570 aa14.31□□□□□ -0.12
PCCB-202ENST00000459873 CFDP1Q9UEE9 299 aaPredicted RBP14.31□□□□□ -0.12
PCCB-202ENST00000459873 REREQ9P2R6 1566 aa14.3□□□□□ -0.12
PCCB-202ENST00000459873 ADGBQ8N7X0 1667 aa14.3□□□□□ -0.12
PCCB-202ENST00000459873 MLH3Q9UHC1 1453 aa14.3□□□□□ -0.12
PCCB-202ENST00000459873 SHANK2Q9UPX8 1470 aa14.29□□□□□ -0.12
PCCB-202ENST00000459873 PLXNC1O60486 1568 aa14.29□□□□□ -0.12
PCCB-202ENST00000459873 YEATS2Q9ULM3 1422 aa14.28□□□□□ -0.12
PCCB-202ENST00000459873 RAPGEF3O95398 923 aa14.27□□□□□ -0.13
PCCB-202ENST00000459873 ZNF644Q9H582 1327 aaPredicted RBP14.26□□□□□ -0.13
PCCB-202ENST00000459873 RRBP1Q9P2E9 1410 aaKnown RBP14.24□□□□□ -0.13
PCCB-202ENST00000459873 ZNF777Q9ULD5 760 aaPredicted RBP14.24□□□□□ -0.13
PCCB-202ENST00000459873 DAPK1P53355 1430 aa14.23□□□□□ -0.13
PCCB-202ENST00000459873 C9orf84Q5VXU9 1444 aa14.23□□□□□ -0.13
PCCB-202ENST00000459873 BCORL1Q5H9F3 1711 aa14.22□□□□□ -0.13
PCCB-202ENST00000459873 RTEL1-TNFRSF6BF6WH68 1400 aa14.21□□□□□ -0.13
PCCB-202ENST00000459873 AFAP1Q8N556 730 aa14.2□□□□□ -0.14
PCCB-202ENST00000459873 ABCC5O15440 1437 aa14.2□□□□□ -0.14
PCCB-202ENST00000459873 ADGRL2O95490 1459 aa14.19□□□□□ -0.14
PCCB-202ENST00000459873 HNRNPMP52272 730 aaKnown RBP eCLIP14.19□□□□□ -0.14
PCCB-202ENST00000459873 PPARGC1BQ86YN6 1023 aaKnown RBP14.19□□□□□ -0.14
PCCB-202ENST00000459873 AGLP35573 1532 aa14.19□□□□□ -0.14
PCCB-202ENST00000459873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.19□□□□□ -0.14
PCCB-202ENST00000459873 EIF2AK4Q9P2K8 1649 aaKnown RBP14.19□□□□□ -0.14
PCCB-202ENST00000459873 ATP10AO60312 1499 aa14.18□□□□□ -0.14
PCCB-202ENST00000459873 ADAMTSL3P82987 1691 aa14.17□□□□□ -0.14
PCCB-202ENST00000459873 SPAG9O60271 1321 aaKnown RBP14.16□□□□□ -0.14
PCCB-202ENST00000459873 RNF17Q9BXT8 1623 aaKnown RBP14.15□□□□□ -0.14
PCCB-202ENST00000459873 FER1L4A9Z1Z3 1794 aa14.15□□□□□ -0.14
PCCB-202ENST00000459873 A2MP01023 1474 aa14.15□□□□□ -0.14
PCCB-202ENST00000459873 MADDQ8WXG6 1647 aa14.15□□□□□ -0.14
PCCB-202ENST00000459873 GCC2Q8IWJ2 1684 aa14.14□□□□□ -0.15
PCCB-202ENST00000459873 DEPDC5O75140 1603 aa14.13□□□□□ -0.15
PCCB-202ENST00000459873 DUOX2Q9NRD8 1548 aa14.13□□□□□ -0.15
PCCB-202ENST00000459873 PTPRKQ15262 1439 aa14.13□□□□□ -0.15
PCCB-202ENST00000459873 MROH1Q8NDA8 1641 aa14.12□□□□□ -0.15
PCCB-202ENST00000459873 RSPH4AQ5TD94 716 aa14.12□□□□□ -0.15
PCCB-202ENST00000459873 PRDM15P57071 1507 aaPredicted RBP14.1□□□□□ -0.15
PCCB-202ENST00000459873 ERBINQ96RT1 1412 aa14.1□□□□□ -0.15
PCCB-202ENST00000459873 RIMS1Q86UR5 1692 aaKnown RBP14.1□□□□□ -0.15
PCCB-202ENST00000459873 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
PCCB-202ENST00000459873 KIF15Q9NS87 1388 aa14.09□□□□□ -0.15
PCCB-202ENST00000459873 FAM50AQ14320 339 aaKnown RBP14.09□□□□□ -0.15
PCCB-202ENST00000459873 MROH2AA6NES4 1674 aa14.09□□□□□ -0.15
PCCB-202ENST00000459873 ZC3H13Q5T200 1668 aaKnown RBP14.09□□□□□ -0.15
PCCB-202ENST00000459873 ROCK1Q13464 1354 aa14.08□□□□□ -0.16
PCCB-202ENST00000459873 NCOA1Q15788 1441 aa14.07□□□□□ -0.16
PCCB-202ENST00000459873 UNC13BO14795 1591 aa14.07□□□□□ -0.16
PCCB-202ENST00000459873 DHX29Q7Z478 1369 aaKnown RBP14.07□□□□□ -0.16
PCCB-202ENST00000459873 ANKRD30AQ9BXX3 1397 aa14.06□□□□□ -0.16
PCCB-202ENST00000459873 CLTCQ00610 1675 aaKnown RBP14.05□□□□□ -0.16
PCCB-202ENST00000459873 TSPY4P0CV99 314 aa14.05□□□□□ -0.16
PCCB-202ENST00000459873 TSPY10P0CW01 314 aa14.05□□□□□ -0.16
PCCB-202ENST00000459873 KDM5DQ9BY66 1539 aa14.05□□□□□ -0.16
PCCB-202ENST00000459873 MYT1LQ9UL68 1186 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms