RNA–Protein interactions for RNA: ENST00000459688.1

EGFR-208, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-208ENST00000459688 ADGRL1O94910 1474 aa25.56■■□□□ 1.68
EGFR-208ENST00000459688 LRRC9Q6ZRR7 1453 aa25.56■■□□□ 1.68
EGFR-208ENST00000459688 APLP2Q06481 763 aa25.56■■□□□ 1.68
EGFR-208ENST00000459688 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
EGFR-208ENST00000459688 CCNB3Q8WWL7 1395 aa25.55■■□□□ 1.68
EGFR-208ENST00000459688 DENND4BO75064 1496 aaPredicted RBP25.53■■□□□ 1.68
EGFR-208ENST00000459688 GPATCH8Q9UKJ3 1502 aaKnown RBP25.53■■□□□ 1.68
EGFR-208ENST00000459688 KANK4Q5T7N3 995 aaPredicted RBP25.53■■□□□ 1.68
EGFR-208ENST00000459688 FRMPD1Q5SYB0 1578 aa25.52■■□□□ 1.68
EGFR-208ENST00000459688 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
EGFR-208ENST00000459688 SCAPERQ9BY12 1400 aa25.52■■□□□ 1.68
EGFR-208ENST00000459688 NCOA2Q15596 1464 aa25.51■■□□□ 1.67
EGFR-208ENST00000459688 ZNF777Q9ULD5 760 aaPredicted RBP25.49■■□□□ 1.67
EGFR-208ENST00000459688 RICTORQ6R327 1708 aa25.48■■□□□ 1.67
EGFR-208ENST00000459688 CFDP1Q9UEE9 299 aaPredicted RBP25.46■■□□□ 1.67
EGFR-208ENST00000459688 POGZQ7Z3K3 1410 aa25.46■■□□□ 1.67
EGFR-208ENST00000459688 ITSN2Q9NZM3 1697 aa25.45■■□□□ 1.66
EGFR-208ENST00000459688 ABCC1P33527 1531 aa25.44■■□□□ 1.66
EGFR-208ENST00000459688 SAMD9LQ8IVG5 1584 aa25.44■■□□□ 1.66
EGFR-208ENST00000459688 ARHGEF12Q9NZN5 1544 aa25.4■■□□□ 1.66
EGFR-208ENST00000459688 ZMYM4Q5VZL5 1548 aa25.39■■□□□ 1.66
EGFR-208ENST00000459688 ZNF518AQ6AHZ1 1483 aa25.39■■□□□ 1.65
EGFR-208ENST00000459688 SYCP2Q9BX26 1530 aa25.38■■□□□ 1.65
EGFR-208ENST00000459688 AFAP1Q8N556 730 aa25.37■■□□□ 1.65
EGFR-208ENST00000459688 TRAPPC8Q9Y2L5 1435 aa25.37■■□□□ 1.65
EGFR-208ENST00000459688 ZNF644Q9H582 1327 aaPredicted RBP25.37■■□□□ 1.65
EGFR-208ENST00000459688 ARHGEF40Q8TER5 1519 aa25.35■■□□□ 1.65
EGFR-208ENST00000459688 ZFYVE16Q7Z3T8 1539 aa25.34■■□□□ 1.65
EGFR-208ENST00000459688 HNRNPMP52272 730 aaKnown RBP eCLIP25.34■■□□□ 1.65
EGFR-208ENST00000459688 KDM5CP41229 1560 aa25.33■■□□□ 1.65
EGFR-208ENST00000459688 YEATS2Q9ULM3 1422 aa25.33■■□□□ 1.65
EGFR-208ENST00000459688 PLEKHH2Q8IVE3 1493 aa25.33■■□□□ 1.65
EGFR-208ENST00000459688 MYT1LQ9UL68 1186 aa25.32■■□□□ 1.64
EGFR-208ENST00000459688 MAGI2Q86UL8 1455 aa25.3■■□□□ 1.64
EGFR-208ENST00000459688 MYOM3Q5VTT5 1437 aa25.29■■□□□ 1.64
EGFR-208ENST00000459688 KIAA1107Q9UPP5 1409 aa25.29■■□□□ 1.64
EGFR-208ENST00000459688 CAMSAP2Q08AD1 1489 aa25.29■■□□□ 1.64
EGFR-208ENST00000459688 HECW2Q9P2P5 1572 aa25.29■■□□□ 1.64
EGFR-208ENST00000459688 PPARGC1BQ86YN6 1023 aaKnown RBP25.25■■□□□ 1.63
EGFR-208ENST00000459688 MBD5Q9P267 1494 aa25.23■■□□□ 1.63
EGFR-208ENST00000459688 MLH3Q9UHC1 1453 aa25.23■■□□□ 1.63
EGFR-208ENST00000459688 MIA2Q96PC5 1412 aa25.22■■□□□ 1.63
EGFR-208ENST00000459688 ARID4BQ4LE39 1312 aaPredicted RBP25.22■■□□□ 1.63
EGFR-208ENST00000459688 KDM4FA0A1W2PPD8 638 aa25.22■■□□□ 1.63
EGFR-208ENST00000459688 SPAG9O60271 1321 aaKnown RBP25.21■■□□□ 1.63
EGFR-208ENST00000459688 ABCA6Q8N139 1617 aa25.2■■□□□ 1.62
EGFR-208ENST00000459688 DIP2CQ9Y2E4 1556 aa25.2■■□□□ 1.62
EGFR-208ENST00000459688 ATP10AO60312 1499 aa25.2■■□□□ 1.62
EGFR-208ENST00000459688 KIDINS220Q9ULH0 1771 aa25.18■■□□□ 1.62
EGFR-208ENST00000459688 C9orf84Q5VXU9 1444 aa25.18■■□□□ 1.62
EGFR-208ENST00000459688 SIGLEC1Q9BZZ2 1709 aa25.17■■□□□ 1.62
EGFR-208ENST00000459688 CCDC141Q6ZP82 1450 aa25.17■■□□□ 1.62
EGFR-208ENST00000459688 ATP7AQ04656 1500 aa25.17■■□□□ 1.62
EGFR-208ENST00000459688 FGD6Q6ZV73 1430 aa25.16■■□□□ 1.62
EGFR-208ENST00000459688 INO80Q9ULG1 1556 aaPredicted RBP25.16■■□□□ 1.62
EGFR-208ENST00000459688 PTPN23Q9H3S7 1636 aa25.15■■□□□ 1.62
EGFR-208ENST00000459688 AEBP2Q6ZN18 517 aaPredicted RBP25.14■■□□□ 1.62
EGFR-208ENST00000459688 ARHGEF5Q12774 1597 aa25.14■■□□□ 1.61
EGFR-208ENST00000459688 BCORL1Q5H9F3 1711 aa25.09■■□□□ 1.61
EGFR-208ENST00000459688 MLECQ14165 292 aa25.09■■□□□ 1.61
EGFR-208ENST00000459688 RSPH4AQ5TD94 716 aa25.09■■□□□ 1.61
EGFR-208ENST00000459688 TCOF1Q13428 1488 aaKnown RBP25.08■■□□□ 1.6
EGFR-208ENST00000459688 REREQ9P2R6 1566 aa25.07■■□□□ 1.6
EGFR-208ENST00000459688 RTEL1-TNFRSF6BF6WH68 1400 aa25.06■■□□□ 1.6
EGFR-208ENST00000459688 TSPY4P0CV99 314 aa25.06■■□□□ 1.6
EGFR-208ENST00000459688 TSPY10P0CW01 314 aa25.06■■□□□ 1.6
EGFR-208ENST00000459688 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
EGFR-208ENST00000459688 ADAMTSL3P82987 1691 aa25.04■■□□□ 1.6
EGFR-208ENST00000459688 MADDQ8WXG6 1647 aa25.03■■□□□ 1.6
EGFR-208ENST00000459688 A2MP01023 1474 aa25.02■■□□□ 1.6
EGFR-208ENST00000459688 ABCC5O15440 1437 aa25.01■■□□□ 1.59
EGFR-208ENST00000459688 ADGBQ8N7X0 1667 aa25.01■■□□□ 1.59
EGFR-208ENST00000459688 DAPK1P53355 1430 aa25■■□□□ 1.59
EGFR-208ENST00000459688 AGLP35573 1532 aa25■■□□□ 1.59
EGFR-208ENST00000459688 MAST1Q9Y2H9 1570 aa25■■□□□ 1.59
EGFR-208ENST00000459688 DNMT1P26358 1616 aaKnown RBP25■■□□□ 1.59
EGFR-208ENST00000459688 CROCC2H7BZ55 1655 aa24.99■■□□□ 1.59
EGFR-208ENST00000459688 PLXNC1O60486 1568 aa24.99■■□□□ 1.59
EGFR-208ENST00000459688 RIMS1Q86UR5 1692 aaKnown RBP24.96■■□□□ 1.59
EGFR-208ENST00000459688 SHANK2Q9UPX8 1470 aa24.96■■□□□ 1.59
EGFR-208ENST00000459688 FER1L4A9Z1Z3 1794 aa24.93■■□□□ 1.58
EGFR-208ENST00000459688 PTPRMP28827 1452 aa24.93■■□□□ 1.58
EGFR-208ENST00000459688 DHX29Q7Z478 1369 aaKnown RBP24.93■■□□□ 1.58
EGFR-208ENST00000459688 CHIC2Q9UKJ5 165 aa24.92■■□□□ 1.58
EGFR-208ENST00000459688 PLPPR3Q6T4P5 718 aa24.91■■□□□ 1.58
EGFR-208ENST00000459688 GGT6Q6P531 493 aa24.87■■□□□ 1.57
EGFR-208ENST00000459688 RRP7BPQ9NSQ0 103 aa24.87■■□□□ 1.57
EGFR-208ENST00000459688 KIF15Q9NS87 1388 aa24.87■■□□□ 1.57
EGFR-208ENST00000459688 KIF3BO15066 747 aa24.86■■□□□ 1.57
EGFR-208ENST00000459688 ITGAEP38570 1179 aa24.85■■□□□ 1.57
EGFR-208ENST00000459688 ESF1Q9H501 851 aaKnown RBP24.85■■□□□ 1.57
EGFR-208ENST00000459688 ANKRD30AQ9BXX3 1397 aa24.83■■□□□ 1.57
EGFR-208ENST00000459688 DUOX2Q9NRD8 1548 aa24.83■■□□□ 1.57
EGFR-208ENST00000459688 RRBP1Q9P2E9 1410 aaKnown RBP24.83■■□□□ 1.57
EGFR-208ENST00000459688 PTPRKQ15262 1439 aa24.82■■□□□ 1.56
EGFR-208ENST00000459688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.8■■□□□ 1.56
EGFR-208ENST00000459688 NCOA1Q15788 1441 aa24.8■■□□□ 1.56
EGFR-208ENST00000459688 ADGRL2O95490 1459 aa24.8■■□□□ 1.56
EGFR-208ENST00000459688 CEBPAP49715 358 aaPredicted RBP24.79■■□□□ 1.56
EGFR-208ENST00000459688 EIF2AK4Q9P2K8 1649 aaKnown RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms