RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
HDAC7-217ENST00000459625 MCCP23508 829 aa20.46■□□□□ 0.87
HDAC7-217ENST00000459625 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
HDAC7-217ENST00000459625 B4GALNT3Q6L9W6 998 aa20.45■□□□□ 0.86
HDAC7-217ENST00000459625 MORC1Q86VD1 984 aa20.45■□□□□ 0.86
HDAC7-217ENST00000459625 HDGFP51858 240 aaKnown RBP20.44■□□□□ 0.86
HDAC7-217ENST00000459625 HSCBQ8IWL3 235 aa20.44■□□□□ 0.86
HDAC7-217ENST00000459625 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
HDAC7-217ENST00000459625 FRAT2O75474 233 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-217ENST00000459625 NUTM2FA1L443 756 aa20.42■□□□□ 0.86
HDAC7-217ENST00000459625 RASSF8Q8NHQ8 419 aa20.41■□□□□ 0.86
HDAC7-217ENST00000459625 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
HDAC7-217ENST00000459625 NUTM2DQ5VT03 806 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-217ENST00000459625 GTF2E1P29083 439 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-217ENST00000459625 CHAF1AQ13111 956 aaPredicted RBP20.4■□□□□ 0.86
HDAC7-217ENST00000459625 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
HDAC7-217ENST00000459625 TOMM22Q9NS69 142 aa20.4■□□□□ 0.86
HDAC7-217ENST00000459625 CHMP4BQ9H444 224 aaKnown RBP20.39■□□□□ 0.86
HDAC7-217ENST00000459625 A0A0U1RQG5 324 aaPredicted RBP20.39■□□□□ 0.85
HDAC7-217ENST00000459625 RAD21O60216 631 aa20.39■□□□□ 0.85
HDAC7-217ENST00000459625 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
HDAC7-217ENST00000459625 PHF23Q9BUL5 403 aaPredicted RBP20.38■□□□□ 0.85
HDAC7-217ENST00000459625 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
HDAC7-217ENST00000459625 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-217ENST00000459625 NOL8Q76FK4 1167 aaKnown RBP20.36■□□□□ 0.85
HDAC7-217ENST00000459625 MARCH6O60337 910 aa20.34■□□□□ 0.85
HDAC7-217ENST00000459625 KANK1Q14678 1352 aa20.34■□□□□ 0.85
HDAC7-217ENST00000459625 TMF1P82094 1093 aa20.34■□□□□ 0.85
HDAC7-217ENST00000459625 MS4A1P11836 297 aa20.33■□□□□ 0.85
HDAC7-217ENST00000459625 CLIP1P30622 1438 aa20.33■□□□□ 0.84
HDAC7-217ENST00000459625 MSNP26038 577 aaKnown RBP20.32■□□□□ 0.84
HDAC7-217ENST00000459625 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
HDAC7-217ENST00000459625 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
HDAC7-217ENST00000459625 HDGFL2Q7Z4V5 671 aaPredicted RBP20.32■□□□□ 0.84
HDAC7-217ENST00000459625 SLC4A10Q6U841 1118 aa20.29■□□□□ 0.84
HDAC7-217ENST00000459625 ITPRIPQ8IWB1 547 aa20.29■□□□□ 0.84
HDAC7-217ENST00000459625 TRIM6-TRIM34B2RNG4 842 aa20.29■□□□□ 0.84
HDAC7-217ENST00000459625 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
HDAC7-217ENST00000459625 FBXW7Q969H0 707 aa20.28■□□□□ 0.84
HDAC7-217ENST00000459625 GZF1Q9H116 711 aaPredicted RBP20.28■□□□□ 0.84
HDAC7-217ENST00000459625 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
HDAC7-217ENST00000459625 U2AF1L5P0DN76 240 aaPredicted RBP20.25■□□□□ 0.83
HDAC7-217ENST00000459625 U2AF1Q01081 240 aaKnown RBP eCLIP20.25■□□□□ 0.83
HDAC7-217ENST00000459625 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
HDAC7-217ENST00000459625 FOXD4L1Q9NU39 408 aa20.25■□□□□ 0.83
HDAC7-217ENST00000459625 PES1O00541 588 aaKnown RBP20.24■□□□□ 0.83
HDAC7-217ENST00000459625 CEP89Q96ST8 783 aa20.23■□□□□ 0.83
HDAC7-217ENST00000459625 NGDNQ8NEJ9 315 aaKnown RBP20.22■□□□□ 0.83
HDAC7-217ENST00000459625 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
HDAC7-217ENST00000459625 EVA1CP58658 441 aa20.21■□□□□ 0.83
HDAC7-217ENST00000459625 FOXD4L5Q5VV16 416 aaPredicted RBP20.21■□□□□ 0.83
HDAC7-217ENST00000459625 FOXD4L4Q8WXT5 416 aaPredicted RBP20.21■□□□□ 0.83
HDAC7-217ENST00000459625 NOP58Q9Y2X3 529 aaKnown RBP20.2■□□□□ 0.82
HDAC7-217ENST00000459625 FOXD1Q16676 465 aa20.2■□□□□ 0.82
HDAC7-217ENST00000459625 CWC22Q9HCG8 908 aaKnown RBP20.2■□□□□ 0.82
HDAC7-217ENST00000459625 CTDP1Q9Y5B0 961 aaPredicted RBP20.19■□□□□ 0.82
HDAC7-217ENST00000459625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
HDAC7-217ENST00000459625 STK31Q9BXU1 1019 aa20.18■□□□□ 0.82
HDAC7-217ENST00000459625 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
HDAC7-217ENST00000459625 TCEAL9Q9UHQ7 104 aa20.17■□□□□ 0.82
HDAC7-217ENST00000459625 SYTL4Q96C24 671 aaPredicted RBP20.17■□□□□ 0.82
HDAC7-217ENST00000459625 PPP4R2Q9NY27 417 aa20.16■□□□□ 0.82
HDAC7-217ENST00000459625 AMPHP49418 695 aa20.16■□□□□ 0.82
HDAC7-217ENST00000459625 TRIM34Q9BYJ4 488 aa20.15■□□□□ 0.82
HDAC7-217ENST00000459625 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
HDAC7-217ENST00000459625 GPATCH3Q96I76 525 aa20.15■□□□□ 0.82
HDAC7-217ENST00000459625 SLKQ9H2G2 1235 aaPredicted RBP20.14■□□□□ 0.81
HDAC7-217ENST00000459625 TPM4P67936 248 aa20.13■□□□□ 0.81
HDAC7-217ENST00000459625 MFAP1P55081 439 aaKnown RBP20.12■□□□□ 0.81
HDAC7-217ENST00000459625 PATL2C9JE40 543 aaKnown RBP20.11■□□□□ 0.81
HDAC7-217ENST00000459625 IPO8O15397 1037 aaKnown RBP20.11■□□□□ 0.81
HDAC7-217ENST00000459625 EID1Q9Y6B2 187 aa20.11■□□□□ 0.81
HDAC7-217ENST00000459625 CCDC146Q8IYE0 955 aa20.1■□□□□ 0.81
HDAC7-217ENST00000459625 HTATSF1O43719 755 aaKnown RBP20.08■□□□□ 0.8
HDAC7-217ENST00000459625 CLUAP1Q96AJ1 413 aa20.07■□□□□ 0.8
HDAC7-217ENST00000459625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.07■□□□□ 0.8
HDAC7-217ENST00000459625 TPD52L1Q16890 204 aaPredicted RBP20.06■□□□□ 0.8
HDAC7-217ENST00000459625 FOXD4L6Q3SYB3 417 aaPredicted RBP20.06■□□□□ 0.8
HDAC7-217ENST00000459625 FOXD4L3Q6VB84 417 aaPredicted RBP20.06■□□□□ 0.8
HDAC7-217ENST00000459625 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
HDAC7-217ENST00000459625 DHX16O60231 1041 aaKnown RBP20.04■□□□□ 0.8
HDAC7-217ENST00000459625 SF3A1Q15459 793 aaKnown RBP20.04■□□□□ 0.8
HDAC7-217ENST00000459625 GOLGA6L1Q8N7Z2 621 aa20.02■□□□□ 0.8
HDAC7-217ENST00000459625 PPP1R1BQ9UD71 204 aaPredicted RBP20.02■□□□□ 0.8
HDAC7-217ENST00000459625 CCDC34Q96HJ3 373 aa20.01■□□□□ 0.79
HDAC7-217ENST00000459625 PKD2Q13563 968 aa20.01■□□□□ 0.79
HDAC7-217ENST00000459625 CALD1Q05682 793 aaKnown RBP20.01■□□□□ 0.79
HDAC7-217ENST00000459625 NECTIN2Q92692 538 aa20■□□□□ 0.79
HDAC7-217ENST00000459625 DCAF8L1A6NGE4 600 aa20■□□□□ 0.79
HDAC7-217ENST00000459625 TPM3P06753 285 aa20■□□□□ 0.79
HDAC7-217ENST00000459625 ELL2O00472 640 aaPredicted RBP19.99■□□□□ 0.79
HDAC7-217ENST00000459625 GBP4Q96PP9 640 aa19.99■□□□□ 0.79
HDAC7-217ENST00000459625 RILPL2Q969X0 211 aa19.99■□□□□ 0.79
HDAC7-217ENST00000459625 NOL10Q9BSC4 688 aaKnown RBP19.99■□□□□ 0.79
HDAC7-217ENST00000459625 CCAR2Q8N163 923 aaKnown RBP19.98■□□□□ 0.79
HDAC7-217ENST00000459625 AKAP17AQ02040 695 aaKnown RBP19.98■□□□□ 0.79
HDAC7-217ENST00000459625 TNNT3P45378 269 aaPredicted RBP19.97■□□□□ 0.79
HDAC7-217ENST00000459625 ROCK2O75116 1388 aaKnown RBP19.97■□□□□ 0.79
HDAC7-217ENST00000459625 KIF3BO15066 747 aa19.97■□□□□ 0.79
HDAC7-217ENST00000459625 RWDD1Q9H446 243 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms