RNA–Protein interactions for RNA: ENST00000458616.1

NELFA-211, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 792 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-211ENST00000458616 POGZQ7Z3K3 1410 aa27.47■■□□□ 1.99
NELFA-211ENST00000458616 SIGLEC1Q9BZZ2 1709 aa27.47■■□□□ 1.99
NELFA-211ENST00000458616 KIF14Q15058 1648 aa27.46■■□□□ 1.99
NELFA-211ENST00000458616 ZFYVE16Q7Z3T8 1539 aa27.46■■□□□ 1.99
NELFA-211ENST00000458616 LRRIQ1Q96JM4 1722 aa27.44■■□□□ 1.98
NELFA-211ENST00000458616 MYO5CQ9NQX4 1742 aa27.39■■□□□ 1.98
NELFA-211ENST00000458616 RIMS1Q86UR5 1692 aaKnown RBP27.38■■□□□ 1.97
NELFA-211ENST00000458616 AFAP1Q8N556 730 aa27.38■■□□□ 1.97
NELFA-211ENST00000458616 CASKIN1Q8WXD9 1431 aa27.38■■□□□ 1.97
NELFA-211ENST00000458616 MLECQ14165 292 aa27.37■■□□□ 1.97
NELFA-211ENST00000458616 CLIP1P30622 1438 aa27.36■■□□□ 1.97
NELFA-211ENST00000458616 ATP10AO60312 1499 aa27.36■■□□□ 1.97
NELFA-211ENST00000458616 LMTK3Q96Q04 1460 aa27.36■■□□□ 1.97
NELFA-211ENST00000458616 ARHGAP5Q13017 1502 aa27.33■■□□□ 1.97
NELFA-211ENST00000458616 PCF11O94913 1555 aaKnown RBP27.33■■□□□ 1.97
NELFA-211ENST00000458616 PLPPR3Q6T4P5 718 aa27.32■■□□□ 1.96
NELFA-211ENST00000458616 C9orf84Q5VXU9 1444 aa27.29■■□□□ 1.96
NELFA-211ENST00000458616 ZNF518AQ6AHZ1 1483 aa27.29■■□□□ 1.96
NELFA-211ENST00000458616 CDC42BPBQ9Y5S2 1711 aa27.27■■□□□ 1.96
NELFA-211ENST00000458616 CCDC18Q5T9S5 1454 aa27.27■■□□□ 1.96
NELFA-211ENST00000458616 HSPA2P54652 639 aa27.27■■□□□ 1.96
NELFA-211ENST00000458616 KDM5CP41229 1560 aa27.26■■□□□ 1.96
NELFA-211ENST00000458616 ARHGEF12Q9NZN5 1544 aa27.26■■□□□ 1.95
NELFA-211ENST00000458616 TRAPPC8Q9Y2L5 1435 aa27.24■■□□□ 1.95
NELFA-211ENST00000458616 FYCO1Q9BQS8 1478 aa27.21■■□□□ 1.95
NELFA-211ENST00000458616 CEBPAP49715 358 aaPredicted RBP27.2■■□□□ 1.94
NELFA-211ENST00000458616 PREX2Q70Z35 1606 aa27.19■■□□□ 1.94
NELFA-211ENST00000458616 MLH3Q9UHC1 1453 aa27.19■■□□□ 1.94
NELFA-211ENST00000458616 MYT1LQ9UL68 1186 aa27.19■■□□□ 1.94
NELFA-211ENST00000458616 FER1L4A9Z1Z3 1794 aa27.19■■□□□ 1.94
NELFA-211ENST00000458616 DIP2CQ9Y2E4 1556 aa27.17■■□□□ 1.94
NELFA-211ENST00000458616 ABCC1P33527 1531 aa27.16■■□□□ 1.94
NELFA-211ENST00000458616 FBXO41Q8TF61 875 aa27.15■■□□□ 1.94
NELFA-211ENST00000458616 CDC42BPAQ5VT25 1732 aa27.13■■□□□ 1.93
NELFA-211ENST00000458616 GPATCH8Q9UKJ3 1502 aaKnown RBP27.12■■□□□ 1.93
NELFA-211ENST00000458616 ABCA6Q8N139 1617 aa27.12■■□□□ 1.93
NELFA-211ENST00000458616 REREQ9P2R6 1566 aa27.11■■□□□ 1.93
NELFA-211ENST00000458616 ZNF777Q9ULD5 760 aaPredicted RBP27.11■■□□□ 1.93
NELFA-211ENST00000458616 ITSN2Q9NZM3 1697 aa27.09■■□□□ 1.93
NELFA-211ENST00000458616 HNRNPMP52272 730 aaKnown RBP eCLIP27.07■■□□□ 1.925e-9■■■■□ 22.9
NELFA-211ENST00000458616 AGLP35573 1532 aa27.06■■□□□ 1.92
NELFA-211ENST00000458616 KIDINS220Q9ULH0 1771 aa27.06■■□□□ 1.92
NELFA-211ENST00000458616 SAMD9LQ8IVG5 1584 aa27.05■■□□□ 1.92
NELFA-211ENST00000458616 CFDP1Q9UEE9 299 aaPredicted RBP27.02■■□□□ 1.92
NELFA-211ENST00000458616 SYCP2Q9BX26 1530 aa27■■□□□ 1.91
NELFA-211ENST00000458616 SPAG9O60271 1321 aaKnown RBP26.99■■□□□ 1.91
NELFA-211ENST00000458616 KIAA1107Q9UPP5 1409 aa26.99■■□□□ 1.91
NELFA-211ENST00000458616 MTUS2Q5JR59 1369 aa26.98■■□□□ 1.91
NELFA-211ENST00000458616 CCNB3Q8WWL7 1395 aa26.98■■□□□ 1.91
NELFA-211ENST00000458616 PREX1Q8TCU6 1659 aa26.98■■□□□ 1.91
NELFA-211ENST00000458616 ZNF644Q9H582 1327 aaPredicted RBP26.95■■□□□ 1.91
NELFA-211ENST00000458616 SETD1BQ9UPS6 1966 aaKnown RBP26.95■■□□□ 1.91
NELFA-211ENST00000458616 CEP162Q5TB80 1403 aa26.93■■□□□ 1.9
NELFA-211ENST00000458616 C3P01024 1663 aa26.92■■□□□ 1.9
NELFA-211ENST00000458616 UHRF1BP1Q6BDS2 1440 aa26.92■■□□□ 1.9
NELFA-211ENST00000458616 ESF1Q9H501 851 aaKnown RBP26.92■■□□□ 1.9
NELFA-211ENST00000458616 CERKQ8TCT0 537 aa26.91■■□□□ 1.9
NELFA-211ENST00000458616 PLEKHH2Q8IVE3 1493 aa26.91■■□□□ 1.9
NELFA-211ENST00000458616 STRCQ7RTU9 1775 aa26.89■■□□□ 1.89
NELFA-211ENST00000458616 ATP7AQ04656 1500 aa26.88■■□□□ 1.89
NELFA-211ENST00000458616 CNTLNQ9NXG0 1405 aa26.88■■□□□ 1.89
NELFA-211ENST00000458616 TIAM1Q13009 1591 aa26.86■■□□□ 1.89
NELFA-211ENST00000458616 MBD5Q9P267 1494 aa26.86■■□□□ 1.89
NELFA-211ENST00000458616 ZMYM3Q14202 1370 aa26.84■■□□□ 1.89
NELFA-211ENST00000458616 INO80Q9ULG1 1556 aaPredicted RBP26.84■■□□□ 1.89
NELFA-211ENST00000458616 DMRT2Q9Y5R5 561 aa26.84■■□□□ 1.89
NELFA-211ENST00000458616 A2MP01023 1474 aa26.84■■□□□ 1.89
NELFA-211ENST00000458616 EHBP1L1Q8N3D4 1523 aa26.83■■□□□ 1.89
NELFA-211ENST00000458616 SUPT6HQ7KZ85 1726 aaKnown RBP26.82■■□□□ 1.88
NELFA-211ENST00000458616 LOC105371045A0A1W2PR82 267 aa26.82■■□□□ 1.88
NELFA-211ENST00000458616 PLXNC1O60486 1568 aa26.82■■□□□ 1.88
NELFA-211ENST00000458616 GGT6Q6P531 493 aa26.78■■□□□ 1.88
NELFA-211ENST00000458616 NPATQ14207 1427 aa26.77■■□□□ 1.88
NELFA-211ENST00000458616 MROH2AA6NES4 1674 aa26.76■■□□□ 1.87
NELFA-211ENST00000458616 PTPRTO14522 1441 aa26.75■■□□□ 1.87
NELFA-211ENST00000458616 RTEL1-TNFRSF6BF6WH68 1400 aa26.74■■□□□ 1.87
NELFA-211ENST00000458616 NCOA2Q15596 1464 aa26.74■■□□□ 1.87
NELFA-211ENST00000458616 NCOA1Q15788 1441 aa26.72■■□□□ 1.87
NELFA-211ENST00000458616 PPP6R1Q9UPN7 881 aa26.71■■□□□ 1.87
NELFA-211ENST00000458616 PTPRKQ15262 1439 aa26.71■■□□□ 1.87
NELFA-211ENST00000458616 DHX29Q7Z478 1369 aaKnown RBP26.71■■□□□ 1.87
NELFA-211ENST00000458616 CLTCQ00610 1675 aaKnown RBP26.7■■□□□ 1.87
NELFA-211ENST00000458616 ADGBQ8N7X0 1667 aa26.68■■□□□ 1.86
NELFA-211ENST00000458616 CAMSAP2Q08AD1 1489 aa26.66■■□□□ 1.86
NELFA-211ENST00000458616 RSPH4AQ5TD94 716 aa26.65■■□□□ 1.86
NELFA-211ENST00000458616 VPS8Q8N3P4 1428 aa26.65■■□□□ 1.86
NELFA-211ENST00000458616 NCKAP5LQ9HCH0 1330 aa26.65■■□□□ 1.86
NELFA-211ENST00000458616 CAMSAP1Q5T5Y3 1602 aa26.64■■□□□ 1.85
NELFA-211ENST00000458616 CCDC141Q6ZP82 1450 aa26.63■■□□□ 1.85
NELFA-211ENST00000458616 KIF3BO15066 747 aa26.62■■□□□ 1.85
NELFA-211ENST00000458616 KANK4Q5T7N3 995 aaPredicted RBP26.62■■□□□ 1.85
NELFA-211ENST00000458616 LRRC9Q6ZRR7 1453 aa26.62■■□□□ 1.85
NELFA-211ENST00000458616 LTBP4Q8N2S1 1624 aa26.61■■□□□ 1.85
NELFA-211ENST00000458616 FBXO31Q5XUX0 539 aaPredicted RBP26.58■■□□□ 1.85
NELFA-211ENST00000458616 MYO3AQ8NEV4 1616 aa26.56■■□□□ 1.84
NELFA-211ENST00000458616 ARHGEF5Q12774 1597 aa26.54■■□□□ 1.84
NELFA-211ENST00000458616 CEP170BQ9Y4F5 1589 aaPredicted RBP26.54■■□□□ 1.84
NELFA-211ENST00000458616 TSPY4P0CV99 314 aa26.54■■□□□ 1.84
NELFA-211ENST00000458616 TSPY10P0CW01 314 aa26.54■■□□□ 1.84
NELFA-211ENST00000458616 ZNF142P52746 1687 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms