RNA–Protein interactions for RNA: ENST00000457958.6

LINC00511-202, long intergenic non-protein coding RNA 511, humanhuman

TSL 1 (best) BASIC

Gene LINC00511, Length 1,696 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-202ENST00000457958 COL17A1Q9UMD9 1497 aaPredicted RBP18.44■□□□□ 0.54
LINC00511-202ENST00000457958 UACAQ9BZF9 1416 aa18.44■□□□□ 0.54
LINC00511-202ENST00000457958 MAGI3Q5TCQ9 1506 aa18.42■□□□□ 0.54
LINC00511-202ENST00000457958 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
LINC00511-202ENST00000457958 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
LINC00511-202ENST00000457958 ADGRL1O94910 1474 aa18.4■□□□□ 0.54
LINC00511-202ENST00000457958 ACIN1Q9UKV3 1341 aaKnown RBP18.4■□□□□ 0.54
LINC00511-202ENST00000457958 ILDR1Q86SU0 546 aaPredicted RBP18.4■□□□□ 0.54
LINC00511-202ENST00000457958 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.53
LINC00511-202ENST00000457958 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.53
LINC00511-202ENST00000457958 KDM5BQ9UGL1 1544 aa18.39■□□□□ 0.53
LINC00511-202ENST00000457958 DIEXFQ68CQ4 756 aaKnown RBP18.38■□□□□ 0.53
LINC00511-202ENST00000457958 HFM1A2PYH4 1435 aa18.38■□□□□ 0.53
LINC00511-202ENST00000457958 TIMELESSQ9UNS1 1208 aa18.36■□□□□ 0.53
LINC00511-202ENST00000457958 MAP3K4Q9Y6R4 1608 aa18.35■□□□□ 0.53
LINC00511-202ENST00000457958 ZCCHC11Q5TAX3 1644 aaKnown RBP18.33■□□□□ 0.52
LINC00511-202ENST00000457958 AKNAQ7Z591 1439 aa18.33■□□□□ 0.52
LINC00511-202ENST00000457958 TROQ12816 1431 aaPredicted RBP18.31■□□□□ 0.52
LINC00511-202ENST00000457958 TEX14Q8IWB6 1497 aa18.3■□□□□ 0.52
LINC00511-202ENST00000457958 PTPRKQ15262 1439 aa18.29■□□□□ 0.52
LINC00511-202ENST00000457958 NAIPQ13075 1403 aa18.28■□□□□ 0.52
LINC00511-202ENST00000457958 ABCA8O94911 1581 aa18.28■□□□□ 0.52
LINC00511-202ENST00000457958 WDR7Q9Y4E6 1490 aa18.27■□□□□ 0.51
LINC00511-202ENST00000457958 ITSN2Q9NZM3 1697 aa18.25■□□□□ 0.51
LINC00511-202ENST00000457958 GCC2Q8IWJ2 1684 aa18.25■□□□□ 0.51
LINC00511-202ENST00000457958 HECW2Q9P2P5 1572 aa18.24■□□□□ 0.51
LINC00511-202ENST00000457958 ROCK1Q13464 1354 aa18.23■□□□□ 0.51
LINC00511-202ENST00000457958 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
LINC00511-202ENST00000457958 ARID3CA6NKF2 412 aa18.21■□□□□ 0.51
LINC00511-202ENST00000457958 KCNH8Q96L42 1107 aa18.2■□□□□ 0.5
LINC00511-202ENST00000457958 DNMT1P26358 1616 aaKnown RBP18.19■□□□□ 0.5
LINC00511-202ENST00000457958 CD109Q6YHK3 1445 aa18.19■□□□□ 0.5
LINC00511-202ENST00000457958 DAPK1P53355 1430 aa18.18■□□□□ 0.5
LINC00511-202ENST00000457958 ATP10BO94823 1461 aa18.17■□□□□ 0.5
LINC00511-202ENST00000457958 SLC4A1APQ9BWU0 796 aaKnown RBP18.16■□□□□ 0.5
LINC00511-202ENST00000457958 KIF14Q15058 1648 aa18.16■□□□□ 0.5
LINC00511-202ENST00000457958 CFDP1Q9UEE9 299 aaPredicted RBP18.15■□□□□ 0.5
LINC00511-202ENST00000457958 GPATCH8Q9UKJ3 1502 aaKnown RBP18.15■□□□□ 0.5
LINC00511-202ENST00000457958 ABCC5O15440 1437 aa18.13■□□□□ 0.49
LINC00511-202ENST00000457958 RRP7BPQ9NSQ0 103 aa18.12■□□□□ 0.49
LINC00511-202ENST00000457958 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
LINC00511-202ENST00000457958 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
LINC00511-202ENST00000457958 NEUROD1Q13562 356 aa18.1■□□□□ 0.49
LINC00511-202ENST00000457958 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
LINC00511-202ENST00000457958 ADGBQ8N7X0 1667 aa18.07■□□□□ 0.48
LINC00511-202ENST00000457958 PPP1R15AO75807 674 aaPredicted RBP18.07■□□□□ 0.48
LINC00511-202ENST00000457958 TONSLQ96HA7 1378 aa18.07■□□□□ 0.48
LINC00511-202ENST00000457958 ADGRL2O95490 1459 aa18.06■□□□□ 0.48
LINC00511-202ENST00000457958 CDC42BPAQ5VT25 1732 aa18.06■□□□□ 0.48
LINC00511-202ENST00000457958 ARAP3Q8WWN8 1544 aa18.05■□□□□ 0.48
LINC00511-202ENST00000457958 TRIM52Q96A61 297 aa18.05■□□□□ 0.48
LINC00511-202ENST00000457958 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
LINC00511-202ENST00000457958 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
LINC00511-202ENST00000457958 PPP4R3CPQ6ZMV5 832 aa18.04■□□□□ 0.48
LINC00511-202ENST00000457958 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
LINC00511-202ENST00000457958 SHANK2Q9UPX8 1470 aa18.03■□□□□ 0.48
LINC00511-202ENST00000457958 ANKRD30AQ9BXX3 1397 aa18.03■□□□□ 0.48
LINC00511-202ENST00000457958 CENPBP07199 599 aaPredicted RBP18.03■□□□□ 0.48
LINC00511-202ENST00000457958 NCOA1Q15788 1441 aa18.02■□□□□ 0.48
LINC00511-202ENST00000457958 MPHOSPH9Q99550 1183 aa18.02■□□□□ 0.47
LINC00511-202ENST00000457958 ARHGEF5Q12774 1597 aa17.99■□□□□ 0.47
LINC00511-202ENST00000457958 RAPGEF3O95398 923 aa17.99■□□□□ 0.47
LINC00511-202ENST00000457958 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
LINC00511-202ENST00000457958 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
LINC00511-202ENST00000457958 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
LINC00511-202ENST00000457958 ABCA9Q8IUA7 1624 aa17.97■□□□□ 0.47
LINC00511-202ENST00000457958 PTPRMP28827 1452 aa17.96■□□□□ 0.47
LINC00511-202ENST00000457958 PREX2Q70Z35 1606 aa17.96■□□□□ 0.47
LINC00511-202ENST00000457958 MIER1Q8N108 512 aa17.96■□□□□ 0.47
LINC00511-202ENST00000457958 ADAMTSL3P82987 1691 aa17.94■□□□□ 0.46
LINC00511-202ENST00000457958 DENND4BO75064 1496 aaPredicted RBP17.94■□□□□ 0.46
LINC00511-202ENST00000457958 PLEKHH2Q8IVE3 1493 aa17.93■□□□□ 0.46
LINC00511-202ENST00000457958 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
LINC00511-202ENST00000457958 FBXO41Q8TF61 875 aa17.92■□□□□ 0.46
LINC00511-202ENST00000457958 CDC42BPBQ9Y5S2 1711 aa17.91■□□□□ 0.46
LINC00511-202ENST00000457958 NEO1Q92859 1461 aa17.91■□□□□ 0.46
LINC00511-202ENST00000457958 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
LINC00511-202ENST00000457958 FRMPD1Q5SYB0 1578 aa17.91■□□□□ 0.46
LINC00511-202ENST00000457958 ANKRD50Q9ULJ7 1429 aa17.9■□□□□ 0.46
LINC00511-202ENST00000457958 CCDC141Q6ZP82 1450 aa17.9■□□□□ 0.46
LINC00511-202ENST00000457958 MBD5Q9P267 1494 aa17.89■□□□□ 0.45
LINC00511-202ENST00000457958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00511-202ENST00000457958 MYO5CQ9NQX4 1742 aa17.88■□□□□ 0.45
LINC00511-202ENST00000457958 KIAA1107Q9UPP5 1409 aa17.88■□□□□ 0.45
LINC00511-202ENST00000457958 RPRD2Q5VT52 1461 aaKnown RBP17.87■□□□□ 0.45
LINC00511-202ENST00000457958 SAMD9LQ8IVG5 1584 aa17.87■□□□□ 0.45
LINC00511-202ENST00000457958 ARID4BQ4LE39 1312 aaPredicted RBP17.86■□□□□ 0.45
LINC00511-202ENST00000457958 BCORL1Q5H9F3 1711 aa17.86■□□□□ 0.45
LINC00511-202ENST00000457958 MADDQ8WXG6 1647 aa17.86■□□□□ 0.45
LINC00511-202ENST00000457958 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
LINC00511-202ENST00000457958 ARHGAP5Q13017 1502 aa17.85■□□□□ 0.45
LINC00511-202ENST00000457958 PZPP20742 1482 aa17.85■□□□□ 0.45
LINC00511-202ENST00000457958 TTC37Q6PGP7 1564 aa17.84■□□□□ 0.45
LINC00511-202ENST00000457958 KDM5DQ9BY66 1539 aa17.84■□□□□ 0.45
LINC00511-202ENST00000457958 LMTK3Q96Q04 1460 aa17.84■□□□□ 0.45
LINC00511-202ENST00000457958 HNRNPMP52272 730 aaKnown RBP eCLIP17.83■□□□□ 0.456e-7■■■□□ 16.3
LINC00511-202ENST00000457958 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.45
LINC00511-202ENST00000457958 PLCH2O75038 1416 aa17.82■□□□□ 0.44
LINC00511-202ENST00000457958 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
LINC00511-202ENST00000457958 ARHGEF40Q8TER5 1519 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms