RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 NOP58Q9Y2X3 529 aaKnown RBP15.08■□□□□ 0
SMARCAD1-204ENST00000457823 FMN1Q68DA7 1419 aa15.08■□□□□ 0
SMARCAD1-204ENST00000457823 OS9Q13438 667 aaPredicted RBP15.08■□□□□ 0
SMARCAD1-204ENST00000457823 PDS5BQ9NTI5 1447 aa15.08■□□□□ 0
SMARCAD1-204ENST00000457823 KTN1Q86UP2 1357 aaKnown RBP15.06■□□□□ 0
SMARCAD1-204ENST00000457823 PTMAP06454 111 aaKnown RBP15.05■□□□□ -0
SMARCAD1-204ENST00000457823 ZRSR1Q15695 479 aaKnown RBP15.05■□□□□ -0
SMARCAD1-204ENST00000457823 HNRNPMP52272 730 aaKnown RBP eCLIP15.04■□□□□ -0
SMARCAD1-204ENST00000457823 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
SMARCAD1-204ENST00000457823 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -0
SMARCAD1-204ENST00000457823 KIF3BO15066 747 aa15.04■□□□□ -0
SMARCAD1-204ENST00000457823 ROCK2O75116 1388 aaKnown RBP15.03■□□□□ -0
SMARCAD1-204ENST00000457823 ANKRD30AQ9BXX3 1397 aa15.03■□□□□ -0
SMARCAD1-204ENST00000457823 CDK11BP21127 795 aaKnown RBP15.03■□□□□ -0
SMARCAD1-204ENST00000457823 HSP90AB1P08238 724 aaKnown RBP15.02■□□□□ -0
SMARCAD1-204ENST00000457823 SMARCA2P51531 1590 aa15.02■□□□□ -0
SMARCAD1-204ENST00000457823 KCNJ4P48050 445 aa15.02■□□□□ -0
SMARCAD1-204ENST00000457823 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
SMARCAD1-204ENST00000457823 FGD1P98174 961 aa15.02□□□□□ -0.01
SMARCAD1-204ENST00000457823 HDGFL2Q7Z4V5 671 aaPredicted RBP15.02□□□□□ -0.01
SMARCAD1-204ENST00000457823 RCAN3Q9UKA8 241 aa15.01□□□□□ -0.01
SMARCAD1-204ENST00000457823 RALBP1Q15311 655 aa15.01□□□□□ -0.01
SMARCAD1-204ENST00000457823 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
SMARCAD1-204ENST00000457823 FHOD3Q2V2M9 1422 aa15.01□□□□□ -0.01
SMARCAD1-204ENST00000457823 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
SMARCAD1-204ENST00000457823 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
SMARCAD1-204ENST00000457823 PLCB2Q00722 1185 aa14.99□□□□□ -0.01
SMARCAD1-204ENST00000457823 JPH4Q96JJ6 628 aa14.98□□□□□ -0.01
SMARCAD1-204ENST00000457823 NPHP1O15259 732 aa14.97□□□□□ -0.01
SMARCAD1-204ENST00000457823 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
SMARCAD1-204ENST00000457823 APBB1O00213 710 aa14.97□□□□□ -0.01
SMARCAD1-204ENST00000457823 DNTTIP2Q5QJE6 756 aaKnown RBP14.96□□□□□ -0.01
SMARCAD1-204ENST00000457823 RAPGEF2Q9Y4G8 1499 aa14.96□□□□□ -0.01
SMARCAD1-204ENST00000457823 IPO8O15397 1037 aaKnown RBP14.96□□□□□ -0.01
SMARCAD1-204ENST00000457823 SPRYD3Q8NCJ5 442 aa14.96□□□□□ -0.02
SMARCAD1-204ENST00000457823 NAP1L2Q9ULW6 460 aaPredicted RBP14.95□□□□□ -0.02
SMARCAD1-204ENST00000457823 PAK3O75914 559 aaPredicted RBP14.95□□□□□ -0.02
SMARCAD1-204ENST00000457823 RTN4Q9NQC3 1192 aaKnown RBP14.95□□□□□ -0.02
SMARCAD1-204ENST00000457823 HSCBQ8IWL3 235 aa14.94□□□□□ -0.02
SMARCAD1-204ENST00000457823 WIZO95785 1651 aa14.94□□□□□ -0.02
SMARCAD1-204ENST00000457823 NUTM2DQ5VT03 806 aaPredicted RBP14.94□□□□□ -0.02
SMARCAD1-204ENST00000457823 SPAG9O60271 1321 aaKnown RBP14.93□□□□□ -0.02
SMARCAD1-204ENST00000457823 RSPH4AQ5TD94 716 aa14.93□□□□□ -0.02
SMARCAD1-204ENST00000457823 NLRP13Q86W25 1043 aa14.93□□□□□ -0.02
SMARCAD1-204ENST00000457823 TOP2AP11388 1531 aaKnown RBP14.91□□□□□ -0.02
SMARCAD1-204ENST00000457823 ST20-MTHFSA0A0A6YYL1 179 aa14.91□□□□□ -0.02
SMARCAD1-204ENST00000457823 ITPRIPQ8IWB1 547 aa14.9□□□□□ -0.02
SMARCAD1-204ENST00000457823 RUSC2Q8N2Y8 1516 aa14.9□□□□□ -0.02
SMARCAD1-204ENST00000457823 WASHC2CQ9Y4E1 1318 aa14.9□□□□□ -0.02
SMARCAD1-204ENST00000457823 GOLGA2Q08379 1002 aa14.9□□□□□ -0.02
SMARCAD1-204ENST00000457823 CLUAP1Q96AJ1 413 aa14.89□□□□□ -0.03
SMARCAD1-204ENST00000457823 CCDC146Q8IYE0 955 aa14.89□□□□□ -0.03
SMARCAD1-204ENST00000457823 RWDD1Q9H446 243 aaPredicted RBP14.89□□□□□ -0.03
SMARCAD1-204ENST00000457823 GOLGA6L4A6NEF3 574 aa14.88□□□□□ -0.03
SMARCAD1-204ENST00000457823 CALD1Q05682 793 aaKnown RBP14.88□□□□□ -0.03
SMARCAD1-204ENST00000457823 TERF2IPQ9NYB0 399 aa14.88□□□□□ -0.03
SMARCAD1-204ENST00000457823 TULP1O00294 542 aaPredicted RBP14.88□□□□□ -0.03
SMARCAD1-204ENST00000457823 TRAK1Q9UPV9 953 aa14.88□□□□□ -0.03
SMARCAD1-204ENST00000457823 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
SMARCAD1-204ENST00000457823 DHX57Q6P158 1386 aaKnown RBP14.86□□□□□ -0.03
SMARCAD1-204ENST00000457823 MCCP23508 829 aa14.86□□□□□ -0.03
SMARCAD1-204ENST00000457823 TCERG1O14776 1098 aaKnown RBP14.86□□□□□ -0.03
SMARCAD1-204ENST00000457823 SMC4Q9NTJ3 1288 aa14.86□□□□□ -0.03
SMARCAD1-204ENST00000457823 CCDC18Q5T9S5 1454 aa14.85□□□□□ -0.03
SMARCAD1-204ENST00000457823 NUTM2FA1L443 756 aa14.85□□□□□ -0.03
SMARCAD1-204ENST00000457823 CSB-PGBD3P0DP91 1061 aa14.85□□□□□ -0.03
SMARCAD1-204ENST00000457823 NAP1L5Q96NT1 182 aaPredicted RBP14.85□□□□□ -0.03
SMARCAD1-204ENST00000457823 EIF3AQ14152 1382 aaKnown RBP14.84□□□□□ -0.03
SMARCAD1-204ENST00000457823 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
SMARCAD1-204ENST00000457823 ZNF330Q9Y3S2 320 aaPredicted RBP14.83□□□□□ -0.04
SMARCAD1-204ENST00000457823 PANK3Q9H999 370 aa14.83□□□□□ -0.04
SMARCAD1-204ENST00000457823 PDE3BQ13370 1112 aa14.83□□□□□ -0.04
SMARCAD1-204ENST00000457823 KIAA1211Q6ZU35 1233 aa14.82□□□□□ -0.04
SMARCAD1-204ENST00000457823 CFAP44Q96MT7 982 aa14.82□□□□□ -0.04
SMARCAD1-204ENST00000457823 STK31Q9BXU1 1019 aa14.82□□□□□ -0.04
SMARCAD1-204ENST00000457823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMARCAD1-204ENST00000457823 NGDNQ8NEJ9 315 aaKnown RBP14.81□□□□□ -0.04
SMARCAD1-204ENST00000457823 DEKP35659 375 aaKnown RBP14.81□□□□□ -0.04
SMARCAD1-204ENST00000457823 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
SMARCAD1-204ENST00000457823 PRKRIP1Q9H875 184 aaPredicted RBP14.8□□□□□ -0.04
SMARCAD1-204ENST00000457823 RRP7AQ9Y3A4 280 aaKnown RBP14.8□□□□□ -0.04
SMARCAD1-204ENST00000457823 PMFBP1Q8TBY8 1022 aa14.8□□□□□ -0.04
SMARCAD1-204ENST00000457823 CENPJQ9HC77 1338 aaPredicted RBP14.79□□□□□ -0.04
SMARCAD1-204ENST00000457823 SLC4A10Q6U841 1118 aa14.78□□□□□ -0.04
SMARCAD1-204ENST00000457823 EID1Q9Y6B2 187 aa14.78□□□□□ -0.04
SMARCAD1-204ENST00000457823 CCDC144AA2RUR9 1427 aa14.78□□□□□ -0.04
SMARCAD1-204ENST00000457823 MFAP1P55081 439 aaKnown RBP14.77□□□□□ -0.04
SMARCAD1-204ENST00000457823 LTV1Q96GA3 475 aaPredicted RBP14.77□□□□□ -0.04
SMARCAD1-204ENST00000457823 AMPHP49418 695 aa14.77□□□□□ -0.05
SMARCAD1-204ENST00000457823 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.05
SMARCAD1-204ENST00000457823 GZF1Q9H116 711 aaPredicted RBP14.76□□□□□ -0.05
SMARCAD1-204ENST00000457823 CHMP4AQ9BY43 222 aa14.76□□□□□ -0.05
SMARCAD1-204ENST00000457823 KIF15Q9NS87 1388 aa14.76□□□□□ -0.05
SMARCAD1-204ENST00000457823 NRDCO43847 1150 aa14.76□□□□□ -0.05
SMARCAD1-204ENST00000457823 PTPRGP23470 1445 aa14.76□□□□□ -0.05
SMARCAD1-204ENST00000457823 ELL2O00472 640 aaPredicted RBP14.75□□□□□ -0.05
SMARCAD1-204ENST00000457823 L1TD1Q5T7N2 865 aaKnown RBP14.75□□□□□ -0.05
SMARCAD1-204ENST00000457823 BCL2L13Q9BXK5 485 aa14.74□□□□□ -0.05
SMARCAD1-204ENST00000457823 FANCD2Q9BXW9 1451 aa14.74□□□□□ -0.05
SMARCAD1-204ENST00000457823 GOLGA6L6A8MZA4 724 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms