RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 GPATCH8Q9UKJ3 1502 aaKnown RBP28.4■■■□□ 2.14
TRIM13-206ENST00000457662 SUPT6HQ7KZ85 1726 aaKnown RBP28.4■■■□□ 2.14
TRIM13-206ENST00000457662 ARHGAP5Q13017 1502 aa28.39■■■□□ 2.14
TRIM13-206ENST00000457662 NCOA2Q15596 1464 aa28.38■■■□□ 2.13
TRIM13-206ENST00000457662 PREX2Q70Z35 1606 aa28.36■■■□□ 2.13
TRIM13-206ENST00000457662 CDC42BPAQ5VT25 1732 aa28.36■■■□□ 2.13
TRIM13-206ENST00000457662 CFDP1Q9UEE9 299 aaPredicted RBP28.36■■■□□ 2.13
TRIM13-206ENST00000457662 CDC42BPBQ9Y5S2 1711 aa28.36■■■□□ 2.13
TRIM13-206ENST00000457662 ADGRL1O94910 1474 aa28.31■■■□□ 2.12
TRIM13-206ENST00000457662 RAPGEF3O95398 923 aa28.31■■■□□ 2.12
TRIM13-206ENST00000457662 DENND4BO75064 1496 aaPredicted RBP28.3■■■□□ 2.12
TRIM13-206ENST00000457662 ZNF777Q9ULD5 760 aaPredicted RBP28.3■■■□□ 2.12
TRIM13-206ENST00000457662 SCAPERQ9BY12 1400 aa28.3■■■□□ 2.12
TRIM13-206ENST00000457662 ITSN2Q9NZM3 1697 aa28.26■■■□□ 2.11
TRIM13-206ENST00000457662 PLEKHH2Q8IVE3 1493 aa28.2■■■□□ 2.1
TRIM13-206ENST00000457662 MYOM3Q5VTT5 1437 aa28.19■■■□□ 2.1
TRIM13-206ENST00000457662 SAMD9LQ8IVG5 1584 aa28.19■■■□□ 2.1
TRIM13-206ENST00000457662 ABCC1P33527 1531 aa28.19■■■□□ 2.1
TRIM13-206ENST00000457662 POGZQ7Z3K3 1410 aa28.18■■■□□ 2.1
TRIM13-206ENST00000457662 KIAA1107Q9UPP5 1409 aa28.18■■■□□ 2.1
TRIM13-206ENST00000457662 RICTORQ6R327 1708 aa28.18■■■□□ 2.1
TRIM13-206ENST00000457662 ZNF644Q9H582 1327 aaPredicted RBP28.17■■■□□ 2.1
TRIM13-206ENST00000457662 HNRNPMP52272 730 aaKnown RBP eCLIP28.16■■■□□ 2.1
TRIM13-206ENST00000457662 AFAP1Q8N556 730 aa28.16■■■□□ 2.1
TRIM13-206ENST00000457662 MIA2Q96PC5 1412 aa28.16■■■□□ 2.1
TRIM13-206ENST00000457662 FRMPD1Q5SYB0 1578 aa28.16■■■□□ 2.1
TRIM13-206ENST00000457662 ARHGEF12Q9NZN5 1544 aa28.16■■■□□ 2.1
TRIM13-206ENST00000457662 ZNF518AQ6AHZ1 1483 aa28.15■■■□□ 2.1
TRIM13-206ENST00000457662 PPARGC1BQ86YN6 1023 aaKnown RBP28.13■■■□□ 2.09
TRIM13-206ENST00000457662 TRAPPC8Q9Y2L5 1435 aa28.12■■■□□ 2.09
TRIM13-206ENST00000457662 SYCP2Q9BX26 1530 aa28.11■■■□□ 2.09
TRIM13-206ENST00000457662 MAGI2Q86UL8 1455 aa28.1■■■□□ 2.09
TRIM13-206ENST00000457662 ZMYM4Q5VZL5 1548 aa28.1■■■□□ 2.09
TRIM13-206ENST00000457662 RSPH4AQ5TD94 716 aa28.09■■■□□ 2.09
TRIM13-206ENST00000457662 CAMSAP2Q08AD1 1489 aa28.09■■■□□ 2.09
TRIM13-206ENST00000457662 KDM5CP41229 1560 aa28.06■■■□□ 2.08
TRIM13-206ENST00000457662 MYT1LQ9UL68 1186 aa28.06■■■□□ 2.08
TRIM13-206ENST00000457662 MBD5Q9P267 1494 aa28.06■■■□□ 2.08
TRIM13-206ENST00000457662 FGD6Q6ZV73 1430 aa28.05■■■□□ 2.08
TRIM13-206ENST00000457662 MLH3Q9UHC1 1453 aa28.03■■■□□ 2.08
TRIM13-206ENST00000457662 SPAG9O60271 1321 aaKnown RBP28.02■■■□□ 2.08
TRIM13-206ENST00000457662 ZFYVE16Q7Z3T8 1539 aa28■■■□□ 2.07
TRIM13-206ENST00000457662 YEATS2Q9ULM3 1422 aa27.99■■■□□ 2.07
TRIM13-206ENST00000457662 PTPN23Q9H3S7 1636 aa27.98■■■□□ 2.07
TRIM13-206ENST00000457662 HECW2Q9P2P5 1572 aa27.98■■■□□ 2.07
TRIM13-206ENST00000457662 TSPY4P0CV99 314 aa27.97■■■□□ 2.07
TRIM13-206ENST00000457662 TSPY10P0CW01 314 aa27.97■■■□□ 2.07
TRIM13-206ENST00000457662 CCDC141Q6ZP82 1450 aa27.97■■■□□ 2.07
TRIM13-206ENST00000457662 ARHGEF5Q12774 1597 aa27.96■■■□□ 2.07
TRIM13-206ENST00000457662 ARHGEF40Q8TER5 1519 aa27.96■■■□□ 2.07
TRIM13-206ENST00000457662 TCOF1Q13428 1488 aaKnown RBP27.96■■■□□ 2.07
TRIM13-206ENST00000457662 ATP10AO60312 1499 aa27.94■■■□□ 2.06
TRIM13-206ENST00000457662 RTEL1-TNFRSF6BF6WH68 1400 aa27.92■■■□□ 2.06
TRIM13-206ENST00000457662 FAM50AQ14320 339 aaKnown RBP27.92■■■□□ 2.06
TRIM13-206ENST00000457662 KIDINS220Q9ULH0 1771 aa27.91■■■□□ 2.06
TRIM13-206ENST00000457662 ATP7AQ04656 1500 aa27.89■■■□□ 2.06
TRIM13-206ENST00000457662 ARID4BQ4LE39 1312 aaPredicted RBP27.88■■■□□ 2.05
TRIM13-206ENST00000457662 C9orf84Q5VXU9 1444 aa27.87■■■□□ 2.05
TRIM13-206ENST00000457662 INO80Q9ULG1 1556 aaPredicted RBP27.86■■■□□ 2.05
TRIM13-206ENST00000457662 DIP2CQ9Y2E4 1556 aa27.86■■■□□ 2.05
TRIM13-206ENST00000457662 ABCC5O15440 1437 aa27.84■■■□□ 2.05
TRIM13-206ENST00000457662 ABCA6Q8N139 1617 aa27.84■■■□□ 2.05
TRIM13-206ENST00000457662 DAPK1P53355 1430 aa27.83■■■□□ 2.05
TRIM13-206ENST00000457662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.82■■■□□ 2.04
TRIM13-206ENST00000457662 DNMT1P26358 1616 aaKnown RBP27.81■■■□□ 2.04
TRIM13-206ENST00000457662 REREQ9P2R6 1566 aa27.8■■■□□ 2.04
TRIM13-206ENST00000457662 MAST1Q9Y2H9 1570 aa27.79■■■□□ 2.04
TRIM13-206ENST00000457662 RRBP1Q9P2E9 1410 aaKnown RBP27.79■■■□□ 2.04
TRIM13-206ENST00000457662 SHANK2Q9UPX8 1470 aa27.78■■■□□ 2.04
TRIM13-206ENST00000457662 A2MP01023 1474 aa27.77■■■□□ 2.04
TRIM13-206ENST00000457662 KDM4FA0A1W2PPD8 638 aa27.76■■■□□ 2.04
TRIM13-206ENST00000457662 DHX29Q7Z478 1369 aaKnown RBP27.74■■■□□ 2.03
TRIM13-206ENST00000457662 ADGBQ8N7X0 1667 aa27.74■■■□□ 2.03
TRIM13-206ENST00000457662 AGLP35573 1532 aa27.74■■■□□ 2.03
TRIM13-206ENST00000457662 CHIC2Q9UKJ5 165 aa27.73■■■□□ 2.03
TRIM13-206ENST00000457662 CROCC2H7BZ55 1655 aa27.73■■■□□ 2.03
TRIM13-206ENST00000457662 SIGLEC1Q9BZZ2 1709 aa27.72■■■□□ 2.03
TRIM13-206ENST00000457662 MLECQ14165 292 aa27.71■■■□□ 2.03
TRIM13-206ENST00000457662 ANKRD30AQ9BXX3 1397 aa27.69■■■□□ 2.02
TRIM13-206ENST00000457662 BCORL1Q5H9F3 1711 aa27.69■■■□□ 2.02
TRIM13-206ENST00000457662 RRP7BPQ9NSQ0 103 aa27.69■■■□□ 2.02
TRIM13-206ENST00000457662 PLXNC1O60486 1568 aa27.68■■■□□ 2.02
TRIM13-206ENST00000457662 ITGAEP38570 1179 aa27.67■■■□□ 2.02
TRIM13-206ENST00000457662 NCOA1Q15788 1441 aa27.66■■■□□ 2.02
TRIM13-206ENST00000457662 KIF15Q9NS87 1388 aa27.65■■■□□ 2.02
TRIM13-206ENST00000457662 PTPRKQ15262 1439 aa27.64■■■□□ 2.02
TRIM13-206ENST00000457662 ADAMTSL3P82987 1691 aa27.64■■■□□ 2.02
TRIM13-206ENST00000457662 ADGRL2O95490 1459 aa27.64■■■□□ 2.02
TRIM13-206ENST00000457662 KIF3BO15066 747 aa27.63■■■□□ 2.01
TRIM13-206ENST00000457662 DUOX2Q9NRD8 1548 aa27.62■■■□□ 2.01
TRIM13-206ENST00000457662 ROCK1Q13464 1354 aa27.6■■■□□ 2.01
TRIM13-206ENST00000457662 GGT6Q6P531 493 aa27.59■■■□□ 2.01
TRIM13-206ENST00000457662 PPP6R1Q9UPN7 881 aa27.58■■■□□ 2.01
TRIM13-206ENST00000457662 ESF1Q9H501 851 aaKnown RBP27.57■■■□□ 2
TRIM13-206ENST00000457662 AEBP2Q6ZN18 517 aaPredicted RBP27.57■■■□□ 2
TRIM13-206ENST00000457662 MADDQ8WXG6 1647 aa27.55■■■□□ 2
TRIM13-206ENST00000457662 ERBINQ96RT1 1412 aa27.54■■■□□ 2
TRIM13-206ENST00000457662 EIF2AK4Q9P2K8 1649 aaKnown RBP27.51■■□□□ 1.99
TRIM13-206ENST00000457662 FER1L4A9Z1Z3 1794 aa27.5■■□□□ 1.99
TRIM13-206ENST00000457662 PTPRMP28827 1452 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms