RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 CFDP1Q9UEE9 299 aaPredicted RBP19.25■□□□□ 0.67
C9orf139-201ENST00000457302 MYT1LQ9UL68 1186 aa19.25■□□□□ 0.67
C9orf139-201ENST00000457302 SCAPERQ9BY12 1400 aa19.25■□□□□ 0.67
C9orf139-201ENST00000457302 ADGRL1O94910 1474 aa19.24■□□□□ 0.67
C9orf139-201ENST00000457302 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
C9orf139-201ENST00000457302 TIAM1Q13009 1591 aa19.23■□□□□ 0.67
C9orf139-201ENST00000457302 CDC42BPBQ9Y5S2 1711 aa19.22■□□□□ 0.67
C9orf139-201ENST00000457302 MAP3K1Q13233 1512 aa19.2■□□□□ 0.66
C9orf139-201ENST00000457302 CDC42BPAQ5VT25 1732 aa19.2■□□□□ 0.66
C9orf139-201ENST00000457302 SUPT6HQ7KZ85 1726 aaKnown RBP19.19■□□□□ 0.66
C9orf139-201ENST00000457302 PREX2Q70Z35 1606 aa19.18■□□□□ 0.66
C9orf139-201ENST00000457302 GPATCH8Q9UKJ3 1502 aaKnown RBP19.18■□□□□ 0.66
C9orf139-201ENST00000457302 LRRC9Q6ZRR7 1453 aa19.17■□□□□ 0.66
C9orf139-201ENST00000457302 KANK4Q5T7N3 995 aaPredicted RBP19.16■□□□□ 0.66
C9orf139-201ENST00000457302 AFAP1Q8N556 730 aa19.15■□□□□ 0.66
C9orf139-201ENST00000457302 ARID4BQ4LE39 1312 aaPredicted RBP19.15■□□□□ 0.66
C9orf139-201ENST00000457302 RICTORQ6R327 1708 aa19.14■□□□□ 0.65
C9orf139-201ENST00000457302 NCOA2Q15596 1464 aa19.13■□□□□ 0.65
C9orf139-201ENST00000457302 ITSN2Q9NZM3 1697 aa19.13■□□□□ 0.65
C9orf139-201ENST00000457302 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
C9orf139-201ENST00000457302 POGZQ7Z3K3 1410 aa19.12■□□□□ 0.65
C9orf139-201ENST00000457302 HNRNPMP52272 730 aaKnown RBP eCLIP19.12■□□□□ 0.65
C9orf139-201ENST00000457302 ZNF518AQ6AHZ1 1483 aa19.11■□□□□ 0.65
C9orf139-201ENST00000457302 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
C9orf139-201ENST00000457302 FRMPD1Q5SYB0 1578 aa19.08■□□□□ 0.65
C9orf139-201ENST00000457302 RSPH4AQ5TD94 716 aa19.08■□□□□ 0.64
C9orf139-201ENST00000457302 KIAA1107Q9UPP5 1409 aa19.07■□□□□ 0.64
C9orf139-201ENST00000457302 ABCC1P33527 1531 aa19.06■□□□□ 0.64
C9orf139-201ENST00000457302 ZFYVE16Q7Z3T8 1539 aa19.06■□□□□ 0.64
C9orf139-201ENST00000457302 ZMYM4Q5VZL5 1548 aa19.05■□□□□ 0.64
C9orf139-201ENST00000457302 SPAG9O60271 1321 aaKnown RBP19.05■□□□□ 0.64
C9orf139-201ENST00000457302 ZNF644Q9H582 1327 aaPredicted RBP19.05■□□□□ 0.64
C9orf139-201ENST00000457302 KDM4FA0A1W2PPD8 638 aa19.05■□□□□ 0.64
C9orf139-201ENST00000457302 SAMD9LQ8IVG5 1584 aa19.05■□□□□ 0.64
C9orf139-201ENST00000457302 TRAPPC8Q9Y2L5 1435 aa19.04■□□□□ 0.64
C9orf139-201ENST00000457302 TSPY4P0CV99 314 aa19.03■□□□□ 0.64
C9orf139-201ENST00000457302 TSPY10P0CW01 314 aa19.03■□□□□ 0.64
C9orf139-201ENST00000457302 ARHGEF12Q9NZN5 1544 aa19.03■□□□□ 0.64
C9orf139-201ENST00000457302 ATP10AO60312 1499 aa19.02■□□□□ 0.63
C9orf139-201ENST00000457302 SYCP2Q9BX26 1530 aa19.01■□□□□ 0.63
C9orf139-201ENST00000457302 MLH3Q9UHC1 1453 aa19.01■□□□□ 0.63
C9orf139-201ENST00000457302 YEATS2Q9ULM3 1422 aa19■□□□□ 0.63
C9orf139-201ENST00000457302 ARHGEF40Q8TER5 1519 aa19■□□□□ 0.63
C9orf139-201ENST00000457302 MYOM3Q5VTT5 1437 aa19■□□□□ 0.63
C9orf139-201ENST00000457302 KDM5CP41229 1560 aa18.99■□□□□ 0.63
C9orf139-201ENST00000457302 HECW2Q9P2P5 1572 aa18.99■□□□□ 0.63
C9orf139-201ENST00000457302 MIA2Q96PC5 1412 aa18.99■□□□□ 0.63
C9orf139-201ENST00000457302 MLECQ14165 292 aa18.98■□□□□ 0.63
C9orf139-201ENST00000457302 C9orf84Q5VXU9 1444 aa18.97■□□□□ 0.63
C9orf139-201ENST00000457302 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
C9orf139-201ENST00000457302 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
C9orf139-201ENST00000457302 MBD5Q9P267 1494 aa18.93■□□□□ 0.62
C9orf139-201ENST00000457302 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
C9orf139-201ENST00000457302 KIDINS220Q9ULH0 1771 aa18.92■□□□□ 0.62
C9orf139-201ENST00000457302 CCDC141Q6ZP82 1450 aa18.91■□□□□ 0.62
C9orf139-201ENST00000457302 BCORL1Q5H9F3 1711 aa18.9■□□□□ 0.62
C9orf139-201ENST00000457302 RTEL1-TNFRSF6BF6WH68 1400 aa18.9■□□□□ 0.62
C9orf139-201ENST00000457302 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
C9orf139-201ENST00000457302 DIP2CQ9Y2E4 1556 aa18.89■□□□□ 0.62
C9orf139-201ENST00000457302 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
C9orf139-201ENST00000457302 ARHGEF5Q12774 1597 aa18.88■□□□□ 0.61
C9orf139-201ENST00000457302 ABCA6Q8N139 1617 aa18.88■□□□□ 0.61
C9orf139-201ENST00000457302 FGD6Q6ZV73 1430 aa18.87■□□□□ 0.61
C9orf139-201ENST00000457302 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
C9orf139-201ENST00000457302 REREQ9P2R6 1566 aa18.85■□□□□ 0.61
C9orf139-201ENST00000457302 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
C9orf139-201ENST00000457302 ADAMTSL3P82987 1691 aa18.85■□□□□ 0.61
C9orf139-201ENST00000457302 A2MP01023 1474 aa18.84■□□□□ 0.61
C9orf139-201ENST00000457302 INO80Q9ULG1 1556 aaPredicted RBP18.84■□□□□ 0.61
C9orf139-201ENST00000457302 ADGBQ8N7X0 1667 aa18.83■□□□□ 0.61
C9orf139-201ENST00000457302 GGT6Q6P531 493 aa18.83■□□□□ 0.6
C9orf139-201ENST00000457302 AGLP35573 1532 aa18.82■□□□□ 0.6
C9orf139-201ENST00000457302 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
C9orf139-201ENST00000457302 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
C9orf139-201ENST00000457302 MADDQ8WXG6 1647 aa18.8■□□□□ 0.6
C9orf139-201ENST00000457302 SIGLEC1Q9BZZ2 1709 aa18.8■□□□□ 0.6
C9orf139-201ENST00000457302 PTPRMP28827 1452 aa18.79■□□□□ 0.6
C9orf139-201ENST00000457302 FER1L4A9Z1Z3 1794 aa18.79■□□□□ 0.6
C9orf139-201ENST00000457302 KIF3BO15066 747 aa18.79■□□□□ 0.6
C9orf139-201ENST00000457302 CHIC2Q9UKJ5 165 aa18.79■□□□□ 0.6
C9orf139-201ENST00000457302 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
C9orf139-201ENST00000457302 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
C9orf139-201ENST00000457302 ABCC5O15440 1437 aa18.76■□□□□ 0.59
C9orf139-201ENST00000457302 DAPK1P53355 1430 aa18.76■□□□□ 0.59
C9orf139-201ENST00000457302 RRP7BPQ9NSQ0 103 aa18.76■□□□□ 0.59
C9orf139-201ENST00000457302 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
C9orf139-201ENST00000457302 ANKRD30AQ9BXX3 1397 aa18.74■□□□□ 0.59
C9orf139-201ENST00000457302 DNMT1P26358 1616 aaKnown RBP18.74■□□□□ 0.59
C9orf139-201ENST00000457302 CNTLNQ9NXG0 1405 aa18.73■□□□□ 0.59
C9orf139-201ENST00000457302 SHANK2Q9UPX8 1470 aa18.72■□□□□ 0.59
C9orf139-201ENST00000457302 ITGAEP38570 1179 aa18.72■□□□□ 0.59
C9orf139-201ENST00000457302 CEBPAP49715 358 aaPredicted RBP18.71■□□□□ 0.59
C9orf139-201ENST00000457302 PLXNC1O60486 1568 aa18.71■□□□□ 0.59
C9orf139-201ENST00000457302 WASHC2CQ9Y4E1 1318 aa18.7■□□□□ 0.58
C9orf139-201ENST00000457302 SETD1BQ9UPS6 1966 aaKnown RBP18.7■□□□□ 0.58
C9orf139-201ENST00000457302 CROCC2H7BZ55 1655 aa18.69■□□□□ 0.58
C9orf139-201ENST00000457302 KIF15Q9NS87 1388 aa18.69■□□□□ 0.58
C9orf139-201ENST00000457302 DUOX2Q9NRD8 1548 aa18.69■□□□□ 0.58
C9orf139-201ENST00000457302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.68■□□□□ 0.58
C9orf139-201ENST00000457302 ZMYM3Q14202 1370 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms