RNA–Protein interactions for RNA: ENST00000456842.1

SMIM12-205, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-205ENST00000456842 POGZQ7Z3K3 1410 aa42.68■■■■■ 4.42
SMIM12-205ENST00000456842 ARHGEF40Q8TER5 1519 aa42.67■■■■■ 4.42
SMIM12-205ENST00000456842 ZMYM4Q5VZL5 1548 aa42.65■■■■■ 4.42
SMIM12-205ENST00000456842 LOC105371045A0A1W2PR82 267 aa42.64■■■■■ 4.42
SMIM12-205ENST00000456842 CEP162Q5TB80 1403 aa42.63■■■■■ 4.42
SMIM12-205ENST00000456842 ZFYVE16Q7Z3T8 1539 aa42.61■■■■■ 4.41
SMIM12-205ENST00000456842 AFAP1Q8N556 730 aa42.58■■■■■ 4.41
SMIM12-205ENST00000456842 MAGI2Q86UL8 1455 aa42.57■■■■■ 4.41
SMIM12-205ENST00000456842 ADAMTSL3P82987 1691 aa42.57■■■■■ 4.4
SMIM12-205ENST00000456842 BCORL1Q5H9F3 1711 aa42.52■■■■■ 4.4
SMIM12-205ENST00000456842 CDC42BPBQ9Y5S2 1711 aa42.51■■■■■ 4.4
SMIM12-205ENST00000456842 PTPRMP28827 1452 aa42.5■■■■■ 4.39
SMIM12-205ENST00000456842 MLECQ14165 292 aa42.47■■■■■ 4.39
SMIM12-205ENST00000456842 PREX2Q70Z35 1606 aa42.46■■■■■ 4.39
SMIM12-205ENST00000456842 MYT1LQ9UL68 1186 aa42.46■■■■■ 4.39
SMIM12-205ENST00000456842 ZNF518AQ6AHZ1 1483 aa42.45■■■■■ 4.39
SMIM12-205ENST00000456842 HECW2Q9P2P5 1572 aa42.44■■■■■ 4.39
SMIM12-205ENST00000456842 SIGLEC1Q9BZZ2 1709 aa42.44■■■■■ 4.38
SMIM12-205ENST00000456842 ZNF777Q9ULD5 760 aaPredicted RBP42.44■■■■■ 4.38
SMIM12-205ENST00000456842 MADDQ8WXG6 1647 aa42.44■■■■■ 4.38
SMIM12-205ENST00000456842 ARHGEF12Q9NZN5 1544 aa42.43■■■■■ 4.38
SMIM12-205ENST00000456842 ATP10AO60312 1499 aa42.42■■■■■ 4.38
SMIM12-205ENST00000456842 MTUS2Q5JR59 1369 aa42.41■■■■■ 4.38
SMIM12-205ENST00000456842 TRAPPC8Q9Y2L5 1435 aa42.41■■■■■ 4.38
SMIM12-205ENST00000456842 GPATCH8Q9UKJ3 1502 aaKnown RBP42.39■■■■■ 4.38
SMIM12-205ENST00000456842 CDC42BPAQ5VT25 1732 aa42.38■■■■■ 4.38
SMIM12-205ENST00000456842 ABCC1P33527 1531 aa42.36■■■■■ 4.37
SMIM12-205ENST00000456842 KDM5CP41229 1560 aa42.35■■■■■ 4.37
SMIM12-205ENST00000456842 PLPPR3Q6T4P5 718 aa42.34■■■■■ 4.37
SMIM12-205ENST00000456842 C9orf84Q5VXU9 1444 aa42.34■■■■■ 4.37
SMIM12-205ENST00000456842 CCNB3Q8WWL7 1395 aa42.31■■■■■ 4.36
SMIM12-205ENST00000456842 CFDP1Q9UEE9 299 aaPredicted RBP42.3■■■■■ 4.36
SMIM12-205ENST00000456842 RIMS1Q86UR5 1692 aaKnown RBP42.28■■■■■ 4.36
SMIM12-205ENST00000456842 HNRNPMP52272 730 aaKnown RBP eCLIP42.27■■■■■ 4.36
SMIM12-205ENST00000456842 MLH3Q9UHC1 1453 aa42.25■■■■■ 4.35
SMIM12-205ENST00000456842 ITSN2Q9NZM3 1697 aa42.25■■■■■ 4.35
SMIM12-205ENST00000456842 SAMD9LQ8IVG5 1584 aa42.24■■■■■ 4.35
SMIM12-205ENST00000456842 DIP2CQ9Y2E4 1556 aa42.21■■■■■ 4.35
SMIM12-205ENST00000456842 EHBP1L1Q8N3D4 1523 aa42.19■■■■■ 4.34
SMIM12-205ENST00000456842 SYCP2Q9BX26 1530 aa42.18■■■■■ 4.34
SMIM12-205ENST00000456842 ABCA6Q8N139 1617 aa42.16■■■■■ 4.34
SMIM12-205ENST00000456842 ZNF644Q9H582 1327 aaPredicted RBP42.15■■■■■ 4.34
SMIM12-205ENST00000456842 VPS8Q8N3P4 1428 aa42.14■■■■■ 4.34
SMIM12-205ENST00000456842 TIAM1Q13009 1591 aa42.11■■■■■ 4.33
SMIM12-205ENST00000456842 SPAG9O60271 1321 aaKnown RBP42.11■■■■■ 4.33
SMIM12-205ENST00000456842 KIAA1107Q9UPP5 1409 aa42.1■■■■■ 4.33
SMIM12-205ENST00000456842 KIDINS220Q9ULH0 1771 aa42.08■■■■■ 4.33
SMIM12-205ENST00000456842 FER1L4A9Z1Z3 1794 aa42.07■■■■■ 4.33
SMIM12-205ENST00000456842 PLEKHH2Q8IVE3 1493 aa42.07■■■■■ 4.33
SMIM12-205ENST00000456842 CEBPAP49715 358 aaPredicted RBP42.05■■■■■ 4.32
SMIM12-205ENST00000456842 REREQ9P2R6 1566 aa42.05■■■■■ 4.32
SMIM12-205ENST00000456842 NCOA2Q15596 1464 aa42.02■■■■■ 4.32
SMIM12-205ENST00000456842 LMTK3Q96Q04 1460 aa42.02■■■■■ 4.32
SMIM12-205ENST00000456842 AGLP35573 1532 aa41.97■■■■■ 4.31
SMIM12-205ENST00000456842 HSPA2P54652 639 aa41.96■■■■■ 4.31
SMIM12-205ENST00000456842 KANK4Q5T7N3 995 aaPredicted RBP41.94■■■■■ 4.3
SMIM12-205ENST00000456842 MBD5Q9P267 1494 aa41.92■■■■■ 4.3
SMIM12-205ENST00000456842 SUPT6HQ7KZ85 1726 aaKnown RBP41.92■■■■■ 4.3
SMIM12-205ENST00000456842 LRRC9Q6ZRR7 1453 aa41.92■■■■■ 4.3
SMIM12-205ENST00000456842 ATP7AQ04656 1500 aa41.91■■■■■ 4.3
SMIM12-205ENST00000456842 ESF1Q9H501 851 aaKnown RBP41.88■■■■■ 4.29
SMIM12-205ENST00000456842 INO80Q9ULG1 1556 aaPredicted RBP41.85■■■■■ 4.29
SMIM12-205ENST00000456842 A2MP01023 1474 aa41.81■■■■■ 4.28
SMIM12-205ENST00000456842 CAMSAP2Q08AD1 1489 aa41.8■■■■■ 4.28
SMIM12-205ENST00000456842 MAP3K1Q13233 1512 aa41.77■■■■■ 4.28
SMIM12-205ENST00000456842 ILDR1Q86SU0 546 aaPredicted RBP41.74■■■■■ 4.27
SMIM12-205ENST00000456842 GGT6Q6P531 493 aa41.72■■■■■ 4.27
SMIM12-205ENST00000456842 CCDC141Q6ZP82 1450 aa41.71■■■■■ 4.27
SMIM12-205ENST00000456842 PLXNC1O60486 1568 aa41.71■■■■■ 4.27
SMIM12-205ENST00000456842 RTEL1-TNFRSF6BF6WH68 1400 aa41.7■■■■■ 4.27
SMIM12-205ENST00000456842 CNTLNQ9NXG0 1405 aa41.69■■■■■ 4.26
SMIM12-205ENST00000456842 APLP2Q06481 763 aa41.68■■■■■ 4.26
SMIM12-205ENST00000456842 RSPH4AQ5TD94 716 aa41.68■■■■■ 4.26
SMIM12-205ENST00000456842 C3P01024 1663 aa41.67■■■■■ 4.26
SMIM12-205ENST00000456842 DHX29Q7Z478 1369 aaKnown RBP41.63■■■■■ 4.25
SMIM12-205ENST00000456842 ZMYM3Q14202 1370 aa41.62■■■■■ 4.25
SMIM12-205ENST00000456842 PREX1Q8TCU6 1659 aa41.61■■■■■ 4.25
SMIM12-205ENST00000456842 UHRF1BP1Q6BDS2 1440 aa41.61■■■■■ 4.25
SMIM12-205ENST00000456842 TSPY4P0CV99 314 aa41.6■■■■■ 4.25
SMIM12-205ENST00000456842 TSPY10P0CW01 314 aa41.6■■■■■ 4.25
SMIM12-205ENST00000456842 ADGBQ8N7X0 1667 aa41.6■■■■■ 4.25
SMIM12-205ENST00000456842 MYOM3Q5VTT5 1437 aa41.59■■■■■ 4.25
SMIM12-205ENST00000456842 ARHGEF5Q12774 1597 aa41.55■■■■■ 4.24
SMIM12-205ENST00000456842 SETD1BQ9UPS6 1966 aaKnown RBP41.55■■■■■ 4.24
SMIM12-205ENST00000456842 KIF3BO15066 747 aa41.54■■■■■ 4.24
SMIM12-205ENST00000456842 MIA2Q96PC5 1412 aa41.52■■■■■ 4.24
SMIM12-205ENST00000456842 CLTCQ00610 1675 aaKnown RBP41.49■■■■■ 4.23
SMIM12-205ENST00000456842 PPP6R1Q9UPN7 881 aa41.48■■■■■ 4.23
SMIM12-205ENST00000456842 MROH2AA6NES4 1674 aa41.46■■■■■ 4.23
SMIM12-205ENST00000456842 NPATQ14207 1427 aa41.44■■■■■ 4.22
SMIM12-205ENST00000456842 PTPRKQ15262 1439 aa41.39■■■■■ 4.22
SMIM12-205ENST00000456842 MAST1Q9Y2H9 1570 aa41.33■■■■■ 4.21
SMIM12-205ENST00000456842 STRCQ7RTU9 1775 aa41.32■■■■■ 4.2
SMIM12-205ENST00000456842 WASHC2CQ9Y4E1 1318 aa41.31■■■■■ 4.2
SMIM12-205ENST00000456842 DMRT2Q9Y5R5 561 aa41.29■■■■■ 4.2
SMIM12-205ENST00000456842 ABCC5O15440 1437 aa41.28■■■■■ 4.2
SMIM12-205ENST00000456842 FGD6Q6ZV73 1430 aa41.28■■■■■ 4.2
SMIM12-205ENST00000456842 FBXO31Q5XUX0 539 aaPredicted RBP41.28■■■■■ 4.2
SMIM12-205ENST00000456842 FBXO41Q8TF61 875 aa41.28■■■■■ 4.2
SMIM12-205ENST00000456842 PTPN23Q9H3S7 1636 aa41.28■■■■■ 4.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms