RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 CDC42BPAQ5VT25 1732 aa27.75■■■□□ 2.03
FAM239A-203ENST00000456563 ARHGAP5Q13017 1502 aa27.73■■■□□ 2.03
FAM239A-203ENST00000456563 CDC42BPBQ9Y5S2 1711 aa27.72■■■□□ 2.03
FAM239A-203ENST00000456563 CFAP74Q9C0B2 1584 aa27.71■■■□□ 2.03
FAM239A-203ENST00000456563 CFDP1Q9UEE9 299 aaPredicted RBP27.71■■■□□ 2.03
FAM239A-203ENST00000456563 ITSN2Q9NZM3 1697 aa27.69■■■□□ 2.02
FAM239A-203ENST00000456563 AKNAQ7Z591 1439 aa27.69■■■□□ 2.02
FAM239A-203ENST00000456563 PPARGC1BQ86YN6 1023 aaKnown RBP27.69■■■□□ 2.02
FAM239A-203ENST00000456563 MYOM3Q5VTT5 1437 aa27.67■■■□□ 2.02
FAM239A-203ENST00000456563 MIA2Q96PC5 1412 aa27.63■■■□□ 2.01
FAM239A-203ENST00000456563 COL17A1Q9UMD9 1497 aaPredicted RBP27.62■■■□□ 2.01
FAM239A-203ENST00000456563 ZNF777Q9ULD5 760 aaPredicted RBP27.61■■■□□ 2.01
FAM239A-203ENST00000456563 ADGRL1O94910 1474 aa27.61■■■□□ 2.01
FAM239A-203ENST00000456563 SAMD9LQ8IVG5 1584 aa27.59■■■□□ 2.01
FAM239A-203ENST00000456563 KDM6BO15054 1643 aa27.59■■■□□ 2.01
FAM239A-203ENST00000456563 SCAPERQ9BY12 1400 aa27.58■■■□□ 2.01
FAM239A-203ENST00000456563 PLEKHH2Q8IVE3 1493 aa27.57■■■□□ 2
FAM239A-203ENST00000456563 KIAA1107Q9UPP5 1409 aa27.57■■■□□ 2
FAM239A-203ENST00000456563 ABCC1P33527 1531 aa27.57■■■□□ 2
FAM239A-203ENST00000456563 ZNF644Q9H582 1327 aaPredicted RBP27.56■■■□□ 2
FAM239A-203ENST00000456563 FGD6Q6ZV73 1430 aa27.56■■■□□ 2
FAM239A-203ENST00000456563 DENND4BO75064 1496 aaPredicted RBP27.56■■■□□ 2
FAM239A-203ENST00000456563 ARHGEF12Q9NZN5 1544 aa27.52■■■□□ 2
FAM239A-203ENST00000456563 CAMSAP2Q08AD1 1489 aa27.52■■■□□ 2
FAM239A-203ENST00000456563 RAPGEF3O95398 923 aa27.51■■□□□ 1.99
FAM239A-203ENST00000456563 POGZQ7Z3K3 1410 aa27.5■■□□□ 1.99
FAM239A-203ENST00000456563 HNRNPMP52272 730 aaKnown RBP eCLIP27.49■■□□□ 1.99
FAM239A-203ENST00000456563 SYCP2Q9BX26 1530 aa27.49■■□□□ 1.99
FAM239A-203ENST00000456563 TCOF1Q13428 1488 aaKnown RBP27.49■■□□□ 1.99
FAM239A-203ENST00000456563 MBD5Q9P267 1494 aa27.48■■□□□ 1.99
FAM239A-203ENST00000456563 PTPN23Q9H3S7 1636 aa27.48■■□□□ 1.99
FAM239A-203ENST00000456563 TRAPPC8Q9Y2L5 1435 aa27.47■■□□□ 1.99
FAM239A-203ENST00000456563 FRMPD1Q5SYB0 1578 aa27.47■■□□□ 1.99
FAM239A-203ENST00000456563 ZNF518AQ6AHZ1 1483 aa27.46■■□□□ 1.99
FAM239A-203ENST00000456563 RICTORQ6R327 1708 aa27.46■■□□□ 1.99
FAM239A-203ENST00000456563 RSPH4AQ5TD94 716 aa27.45■■□□□ 1.98
FAM239A-203ENST00000456563 AFAP1Q8N556 730 aa27.45■■□□□ 1.98
FAM239A-203ENST00000456563 KDM5CP41229 1560 aa27.41■■□□□ 1.98
FAM239A-203ENST00000456563 ZMYM4Q5VZL5 1548 aa27.41■■□□□ 1.98
FAM239A-203ENST00000456563 RRBP1Q9P2E9 1410 aaKnown RBP27.41■■□□□ 1.98
FAM239A-203ENST00000456563 ARHGEF5Q12774 1597 aa27.4■■□□□ 1.98
FAM239A-203ENST00000456563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.38■■□□□ 1.97
FAM239A-203ENST00000456563 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
FAM239A-203ENST00000456563 CCDC141Q6ZP82 1450 aa27.38■■□□□ 1.97
FAM239A-203ENST00000456563 MAGI2Q86UL8 1455 aa27.37■■□□□ 1.97
FAM239A-203ENST00000456563 MLH3Q9UHC1 1453 aa27.35■■□□□ 1.97
FAM239A-203ENST00000456563 SPAG9O60271 1321 aaKnown RBP27.34■■□□□ 1.97
FAM239A-203ENST00000456563 ABCC5O15440 1437 aa27.32■■□□□ 1.96
FAM239A-203ENST00000456563 TSPY4P0CV99 314 aa27.31■■□□□ 1.96
FAM239A-203ENST00000456563 TSPY10P0CW01 314 aa27.31■■□□□ 1.96
FAM239A-203ENST00000456563 HECW2Q9P2P5 1572 aa27.31■■□□□ 1.96
FAM239A-203ENST00000456563 RTEL1-TNFRSF6BF6WH68 1400 aa27.3■■□□□ 1.96
FAM239A-203ENST00000456563 DAPK1P53355 1430 aa27.3■■□□□ 1.96
FAM239A-203ENST00000456563 DNMT1P26358 1616 aaKnown RBP27.3■■□□□ 1.96
FAM239A-203ENST00000456563 YEATS2Q9ULM3 1422 aa27.28■■□□□ 1.96
FAM239A-203ENST00000456563 MYT1LQ9UL68 1186 aa27.28■■□□□ 1.96
FAM239A-203ENST00000456563 ZFYVE16Q7Z3T8 1539 aa27.27■■□□□ 1.96
FAM239A-203ENST00000456563 INO80Q9ULG1 1556 aaPredicted RBP27.26■■□□□ 1.95
FAM239A-203ENST00000456563 ATP7AQ04656 1500 aa27.26■■□□□ 1.95
FAM239A-203ENST00000456563 SHANK2Q9UPX8 1470 aa27.25■■□□□ 1.95
FAM239A-203ENST00000456563 MAST1Q9Y2H9 1570 aa27.25■■□□□ 1.95
FAM239A-203ENST00000456563 KIDINS220Q9ULH0 1771 aa27.25■■□□□ 1.95
FAM239A-203ENST00000456563 C9orf84Q5VXU9 1444 aa27.24■■□□□ 1.95
FAM239A-203ENST00000456563 ARHGEF40Q8TER5 1519 aa27.24■■□□□ 1.95
FAM239A-203ENST00000456563 CROCC2H7BZ55 1655 aa27.22■■□□□ 1.95
FAM239A-203ENST00000456563 ATP10AO60312 1499 aa27.2■■□□□ 1.95
FAM239A-203ENST00000456563 DIP2CQ9Y2E4 1556 aa27.19■■□□□ 1.94
FAM239A-203ENST00000456563 PTPRKQ15262 1439 aa27.18■■□□□ 1.94
FAM239A-203ENST00000456563 ABCA6Q8N139 1617 aa27.18■■□□□ 1.94
FAM239A-203ENST00000456563 CHIC2Q9UKJ5 165 aa27.15■■□□□ 1.94
FAM239A-203ENST00000456563 ITGAEP38570 1179 aa27.14■■□□□ 1.94
FAM239A-203ENST00000456563 REREQ9P2R6 1566 aa27.14■■□□□ 1.93
FAM239A-203ENST00000456563 ADGRL2O95490 1459 aa27.13■■□□□ 1.93
FAM239A-203ENST00000456563 ANKRD30AQ9BXX3 1397 aa27.13■■□□□ 1.93
FAM239A-203ENST00000456563 PLXNC1O60486 1568 aa27.13■■□□□ 1.93
FAM239A-203ENST00000456563 NCOA1Q15788 1441 aa27.12■■□□□ 1.93
FAM239A-203ENST00000456563 A2MP01023 1474 aa27.11■■□□□ 1.93
FAM239A-203ENST00000456563 ROCK1Q13464 1354 aa27.1■■□□□ 1.93
FAM239A-203ENST00000456563 DHX29Q7Z478 1369 aaKnown RBP27.09■■□□□ 1.93
FAM239A-203ENST00000456563 ADGBQ8N7X0 1667 aa27.09■■□□□ 1.93
FAM239A-203ENST00000456563 KIF15Q9NS87 1388 aa27.08■■□□□ 1.93
FAM239A-203ENST00000456563 RRP7BPQ9NSQ0 103 aa27.07■■□□□ 1.92
FAM239A-203ENST00000456563 AGLP35573 1532 aa27.05■■□□□ 1.92
FAM239A-203ENST00000456563 DUOX2Q9NRD8 1548 aa27.04■■□□□ 1.92
FAM239A-203ENST00000456563 SIGLEC1Q9BZZ2 1709 aa27.02■■□□□ 1.92
FAM239A-203ENST00000456563 ARID4BQ4LE39 1312 aaPredicted RBP27.02■■□□□ 1.92
FAM239A-203ENST00000456563 ERBINQ96RT1 1412 aa26.98■■□□□ 1.91
FAM239A-203ENST00000456563 ANKRD50Q9ULJ7 1429 aa26.94■■□□□ 1.9
FAM239A-203ENST00000456563 KIF3BO15066 747 aa26.94■■□□□ 1.9
FAM239A-203ENST00000456563 EIF2AK4Q9P2K8 1649 aaKnown RBP26.93■■□□□ 1.9
FAM239A-203ENST00000456563 BCORL1Q5H9F3 1711 aa26.93■■□□□ 1.9
FAM239A-203ENST00000456563 HFM1A2PYH4 1435 aa26.92■■□□□ 1.9
FAM239A-203ENST00000456563 TRIM26Q12899 539 aaPredicted RBP26.92■■□□□ 1.9
FAM239A-203ENST00000456563 NAIPQ13075 1403 aa26.91■■□□□ 1.9
FAM239A-203ENST00000456563 MLECQ14165 292 aa26.9■■□□□ 1.9
FAM239A-203ENST00000456563 GGT6Q6P531 493 aa26.87■■□□□ 1.89
FAM239A-203ENST00000456563 PPP6R1Q9UPN7 881 aa26.86■■□□□ 1.89
FAM239A-203ENST00000456563 GCC2Q8IWJ2 1684 aa26.85■■□□□ 1.89
FAM239A-203ENST00000456563 RNF17Q9BXT8 1623 aaKnown RBP26.84■■□□□ 1.89
FAM239A-203ENST00000456563 ADAMTSL3P82987 1691 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms