RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ZNF777Q9ULD5 760 aaPredicted RBP28.54■■■□□ 2.16
PDLIM2-215ENST00000456545 MYT1LQ9UL68 1186 aa28.52■■■□□ 2.16
PDLIM2-215ENST00000456545 CDC42BPBQ9Y5S2 1711 aa28.52■■■□□ 2.16
PDLIM2-215ENST00000456545 CCNB3Q8WWL7 1395 aa28.51■■■□□ 2.16
PDLIM2-215ENST00000456545 FRMPD1Q5SYB0 1578 aa28.51■■■□□ 2.15
PDLIM2-215ENST00000456545 RICTORQ6R327 1708 aa28.51■■■□□ 2.15
PDLIM2-215ENST00000456545 APLP2Q06481 763 aa28.5■■■□□ 2.15
PDLIM2-215ENST00000456545 ARID4BQ4LE39 1312 aaPredicted RBP28.49■■■□□ 2.15
PDLIM2-215ENST00000456545 PREX2Q70Z35 1606 aa28.49■■■□□ 2.15
PDLIM2-215ENST00000456545 EHBP1L1Q8N3D4 1523 aa28.48■■■□□ 2.15
PDLIM2-215ENST00000456545 CFDP1Q9UEE9 299 aaPredicted RBP28.48■■■□□ 2.15
PDLIM2-215ENST00000456545 CDC42BPAQ5VT25 1732 aa28.47■■■□□ 2.15
PDLIM2-215ENST00000456545 POGZQ7Z3K3 1410 aa28.46■■■□□ 2.15
PDLIM2-215ENST00000456545 GPATCH8Q9UKJ3 1502 aaKnown RBP28.44■■■□□ 2.14
PDLIM2-215ENST00000456545 AFAP1Q8N556 730 aa28.44■■■□□ 2.14
PDLIM2-215ENST00000456545 TIAM1Q13009 1591 aa28.43■■■□□ 2.14
PDLIM2-215ENST00000456545 MAGI2Q86UL8 1455 aa28.41■■■□□ 2.14
PDLIM2-215ENST00000456545 ZNF518AQ6AHZ1 1483 aa28.4■■■□□ 2.14
PDLIM2-215ENST00000456545 ZMYM4Q5VZL5 1548 aa28.4■■■□□ 2.14
PDLIM2-215ENST00000456545 ZFYVE16Q7Z3T8 1539 aa28.39■■■□□ 2.14
PDLIM2-215ENST00000456545 SUPT6HQ7KZ85 1726 aaKnown RBP28.37■■■□□ 2.13
PDLIM2-215ENST00000456545 ARHGEF40Q8TER5 1519 aa28.36■■■□□ 2.13
PDLIM2-215ENST00000456545 YEATS2Q9ULM3 1422 aa28.35■■■□□ 2.13
PDLIM2-215ENST00000456545 HNRNPMP52272 730 aaKnown RBP eCLIP28.35■■■□□ 2.13
PDLIM2-215ENST00000456545 ABCC1P33527 1531 aa28.34■■■□□ 2.13
PDLIM2-215ENST00000456545 LRRC9Q6ZRR7 1453 aa28.34■■■□□ 2.13
PDLIM2-215ENST00000456545 NCOA2Q15596 1464 aa28.33■■■□□ 2.13
PDLIM2-215ENST00000456545 MAP3K1Q13233 1512 aa28.33■■■□□ 2.13
PDLIM2-215ENST00000456545 KANK4Q5T7N3 995 aaPredicted RBP28.32■■■□□ 2.12
PDLIM2-215ENST00000456545 TRAPPC8Q9Y2L5 1435 aa28.32■■■□□ 2.12
PDLIM2-215ENST00000456545 ITSN2Q9NZM3 1697 aa28.32■■■□□ 2.12
PDLIM2-215ENST00000456545 PLEKHH2Q8IVE3 1493 aa28.31■■■□□ 2.12
PDLIM2-215ENST00000456545 ARHGEF12Q9NZN5 1544 aa28.31■■■□□ 2.12
PDLIM2-215ENST00000456545 SAMD9LQ8IVG5 1584 aa28.3■■■□□ 2.12
PDLIM2-215ENST00000456545 ATP10AO60312 1499 aa28.28■■■□□ 2.12
PDLIM2-215ENST00000456545 KDM5CP41229 1560 aa28.27■■■□□ 2.12
PDLIM2-215ENST00000456545 ZNF644Q9H582 1327 aaPredicted RBP28.26■■■□□ 2.11
PDLIM2-215ENST00000456545 MLECQ14165 292 aa28.26■■■□□ 2.11
PDLIM2-215ENST00000456545 SYCP2Q9BX26 1530 aa28.26■■■□□ 2.11
PDLIM2-215ENST00000456545 KIAA1107Q9UPP5 1409 aa28.26■■■□□ 2.11
PDLIM2-215ENST00000456545 HECW2Q9P2P5 1572 aa28.25■■■□□ 2.11
PDLIM2-215ENST00000456545 SPAG9O60271 1321 aaKnown RBP28.25■■■□□ 2.11
PDLIM2-215ENST00000456545 C9orf84Q5VXU9 1444 aa28.24■■■□□ 2.11
PDLIM2-215ENST00000456545 MLH3Q9UHC1 1453 aa28.23■■■□□ 2.11
PDLIM2-215ENST00000456545 BCORL1Q5H9F3 1711 aa28.21■■■□□ 2.11
PDLIM2-215ENST00000456545 ADAMTSL3P82987 1691 aa28.17■■■□□ 2.1
PDLIM2-215ENST00000456545 RSPH4AQ5TD94 716 aa28.15■■■□□ 2.1
PDLIM2-215ENST00000456545 DIP2CQ9Y2E4 1556 aa28.14■■■□□ 2.1
PDLIM2-215ENST00000456545 KIDINS220Q9ULH0 1771 aa28.13■■■□□ 2.09
PDLIM2-215ENST00000456545 ABCA6Q8N139 1617 aa28.12■■■□□ 2.09
PDLIM2-215ENST00000456545 PLPPR3Q6T4P5 718 aa28.12■■■□□ 2.09
PDLIM2-215ENST00000456545 CAMSAP2Q08AD1 1489 aa28.12■■■□□ 2.09
PDLIM2-215ENST00000456545 MADDQ8WXG6 1647 aa28.1■■■□□ 2.09
PDLIM2-215ENST00000456545 SIGLEC1Q9BZZ2 1709 aa28.1■■■□□ 2.09
PDLIM2-215ENST00000456545 MYOM3Q5VTT5 1437 aa28.09■■■□□ 2.09
PDLIM2-215ENST00000456545 TSPY4P0CV99 314 aa28.09■■■□□ 2.09
PDLIM2-215ENST00000456545 TSPY10P0CW01 314 aa28.09■■■□□ 2.09
PDLIM2-215ENST00000456545 PTPRMP28827 1452 aa28.08■■■□□ 2.09
PDLIM2-215ENST00000456545 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
PDLIM2-215ENST00000456545 ESF1Q9H501 851 aaKnown RBP28.08■■■□□ 2.09
PDLIM2-215ENST00000456545 ATP7AQ04656 1500 aa28.08■■■□□ 2.08
PDLIM2-215ENST00000456545 MIA2Q96PC5 1412 aa28.06■■■□□ 2.08
PDLIM2-215ENST00000456545 RIMS1Q86UR5 1692 aaKnown RBP28.06■■■□□ 2.08
PDLIM2-215ENST00000456545 REREQ9P2R6 1566 aa28.05■■■□□ 2.08
PDLIM2-215ENST00000456545 CCDC141Q6ZP82 1450 aa28.04■■■□□ 2.08
PDLIM2-215ENST00000456545 INO80Q9ULG1 1556 aaPredicted RBP28.01■■■□□ 2.07
PDLIM2-215ENST00000456545 RTEL1-TNFRSF6BF6WH68 1400 aa28.01■■■□□ 2.07
PDLIM2-215ENST00000456545 FER1L4A9Z1Z3 1794 aa28■■■□□ 2.07
PDLIM2-215ENST00000456545 AGLP35573 1532 aa27.99■■■□□ 2.07
PDLIM2-215ENST00000456545 A2MP01023 1474 aa27.98■■■□□ 2.07
PDLIM2-215ENST00000456545 ARHGEF5Q12774 1597 aa27.97■■■□□ 2.07
PDLIM2-215ENST00000456545 ADGBQ8N7X0 1667 aa27.94■■■□□ 2.06
PDLIM2-215ENST00000456545 GGT6Q6P531 493 aa27.93■■■□□ 2.06
PDLIM2-215ENST00000456545 PTPN23Q9H3S7 1636 aa27.91■■■□□ 2.06
PDLIM2-215ENST00000456545 FGD6Q6ZV73 1430 aa27.91■■■□□ 2.06
PDLIM2-215ENST00000456545 CEBPAP49715 358 aaPredicted RBP27.9■■■□□ 2.06
PDLIM2-215ENST00000456545 PPARGC1BQ86YN6 1023 aaKnown RBP27.9■■■□□ 2.06
PDLIM2-215ENST00000456545 DHX29Q7Z478 1369 aaKnown RBP27.89■■■□□ 2.06
PDLIM2-215ENST00000456545 FAM50AQ14320 339 aaKnown RBP27.88■■■□□ 2.05
PDLIM2-215ENST00000456545 KIF3BO15066 747 aa27.86■■■□□ 2.05
PDLIM2-215ENST00000456545 PLXNC1O60486 1568 aa27.85■■■□□ 2.05
PDLIM2-215ENST00000456545 CNTLNQ9NXG0 1405 aa27.84■■■□□ 2.05
PDLIM2-215ENST00000456545 PPP6R1Q9UPN7 881 aa27.81■■■□□ 2.04
PDLIM2-215ENST00000456545 MAST1Q9Y2H9 1570 aa27.81■■■□□ 2.04
PDLIM2-215ENST00000456545 TCOF1Q13428 1488 aaKnown RBP27.8■■■□□ 2.04
PDLIM2-215ENST00000456545 ABCC5O15440 1437 aa27.79■■■□□ 2.04
PDLIM2-215ENST00000456545 CHIC2Q9UKJ5 165 aa27.78■■■□□ 2.04
PDLIM2-215ENST00000456545 DAPK1P53355 1430 aa27.77■■■□□ 2.04
PDLIM2-215ENST00000456545 RRP7BPQ9NSQ0 103 aa27.76■■■□□ 2.03
PDLIM2-215ENST00000456545 ZMYM3Q14202 1370 aa27.74■■■□□ 2.03
PDLIM2-215ENST00000456545 DNMT1P26358 1616 aaKnown RBP27.74■■■□□ 2.03
PDLIM2-215ENST00000456545 C3P01024 1663 aa27.73■■■□□ 2.03
PDLIM2-215ENST00000456545 SHANK2Q9UPX8 1470 aa27.72■■■□□ 2.03
PDLIM2-215ENST00000456545 CLTCQ00610 1675 aaKnown RBP27.72■■■□□ 2.03
PDLIM2-215ENST00000456545 WASHC2CQ9Y4E1 1318 aa27.71■■■□□ 2.03
PDLIM2-215ENST00000456545 CROCC2H7BZ55 1655 aa27.71■■■□□ 2.03
PDLIM2-215ENST00000456545 ANKRD30AQ9BXX3 1397 aa27.7■■■□□ 2.02
PDLIM2-215ENST00000456545 KIF15Q9NS87 1388 aa27.7■■■□□ 2.02
PDLIM2-215ENST00000456545 SETD1BQ9UPS6 1966 aaKnown RBP27.69■■■□□ 2.02
PDLIM2-215ENST00000456545 HSPA2P54652 639 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms