RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 CDC42BPBQ9Y5S2 1711 aa13.48□□□□□ -0.25
SP140-207ENST00000456542 AKNAQ7Z591 1439 aa13.47□□□□□ -0.25
SP140-207ENST00000456542 ARHGAP5Q13017 1502 aa13.46□□□□□ -0.25
SP140-207ENST00000456542 FRMPD1Q5SYB0 1578 aa13.45□□□□□ -0.26
SP140-207ENST00000456542 RICTORQ6R327 1708 aa13.45□□□□□ -0.26
SP140-207ENST00000456542 SUPT6HQ7KZ85 1726 aaKnown RBP13.45□□□□□ -0.26
SP140-207ENST00000456542 EFCAB2Q5VUJ9 269 aa13.45□□□□□ -0.26
SP140-207ENST00000456542 DENND4BO75064 1496 aaPredicted RBP13.44□□□□□ -0.26
SP140-207ENST00000456542 ADGRL1O94910 1474 aa13.44□□□□□ -0.26
SP140-207ENST00000456542 ITSN2Q9NZM3 1697 aa13.44□□□□□ -0.26
SP140-207ENST00000456542 GPATCH8Q9UKJ3 1502 aaKnown RBP13.43□□□□□ -0.26
SP140-207ENST00000456542 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
SP140-207ENST00000456542 SCAPERQ9BY12 1400 aa13.41□□□□□ -0.26
SP140-207ENST00000456542 ZMYM4Q5VZL5 1548 aa13.41□□□□□ -0.26
SP140-207ENST00000456542 CCNB3Q8WWL7 1395 aa13.41□□□□□ -0.26
SP140-207ENST00000456542 POGZQ7Z3K3 1410 aa13.4□□□□□ -0.26
SP140-207ENST00000456542 ABCC1P33527 1531 aa13.4□□□□□ -0.26
SP140-207ENST00000456542 RAPGEF3O95398 923 aa13.4□□□□□ -0.26
SP140-207ENST00000456542 NCOA2Q15596 1464 aa13.4□□□□□ -0.26
SP140-207ENST00000456542 SAMD9LQ8IVG5 1584 aa13.38□□□□□ -0.27
SP140-207ENST00000456542 APLP2Q06481 763 aa13.38□□□□□ -0.27
SP140-207ENST00000456542 KDM5CP41229 1560 aa13.37□□□□□ -0.27
SP140-207ENST00000456542 ZNF518AQ6AHZ1 1483 aa13.37□□□□□ -0.27
SP140-207ENST00000456542 MAGI2Q86UL8 1455 aa13.37□□□□□ -0.27
SP140-207ENST00000456542 ARHGEF40Q8TER5 1519 aa13.37□□□□□ -0.27
SP140-207ENST00000456542 PLEKHH2Q8IVE3 1493 aa13.36□□□□□ -0.27
SP140-207ENST00000456542 CFDP1Q9UEE9 299 aaPredicted RBP13.36□□□□□ -0.27
SP140-207ENST00000456542 KANK4Q5T7N3 995 aaPredicted RBP13.35□□□□□ -0.27
SP140-207ENST00000456542 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
SP140-207ENST00000456542 ARHGEF12Q9NZN5 1544 aa13.34□□□□□ -0.27
SP140-207ENST00000456542 KIAA1107Q9UPP5 1409 aa13.34□□□□□ -0.27
SP140-207ENST00000456542 SYCP2Q9BX26 1530 aa13.34□□□□□ -0.27
SP140-207ENST00000456542 HECW2Q9P2P5 1572 aa13.33□□□□□ -0.28
SP140-207ENST00000456542 TRAPPC8Q9Y2L5 1435 aa13.31□□□□□ -0.28
SP140-207ENST00000456542 MLH3Q9UHC1 1453 aa13.31□□□□□ -0.28
SP140-207ENST00000456542 ZNF777Q9ULD5 760 aaPredicted RBP13.31□□□□□ -0.28
SP140-207ENST00000456542 YEATS2Q9ULM3 1422 aa13.3□□□□□ -0.28
SP140-207ENST00000456542 MYOM3Q5VTT5 1437 aa13.3□□□□□ -0.28
SP140-207ENST00000456542 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
SP140-207ENST00000456542 MIA2Q96PC5 1412 aa13.29□□□□□ -0.28
SP140-207ENST00000456542 CAMSAP2Q08AD1 1489 aa13.29□□□□□ -0.28
SP140-207ENST00000456542 KIDINS220Q9ULH0 1771 aa13.28□□□□□ -0.28
SP140-207ENST00000456542 MBD5Q9P267 1494 aa13.28□□□□□ -0.28
SP140-207ENST00000456542 DIP2CQ9Y2E4 1556 aa13.28□□□□□ -0.28
SP140-207ENST00000456542 ATP10AO60312 1499 aa13.27□□□□□ -0.29
SP140-207ENST00000456542 REREQ9P2R6 1566 aa13.27□□□□□ -0.29
SP140-207ENST00000456542 INO80Q9ULG1 1556 aaPredicted RBP13.27□□□□□ -0.29
SP140-207ENST00000456542 ABCA6Q8N139 1617 aa13.27□□□□□ -0.29
SP140-207ENST00000456542 HNRNPMP52272 730 aaKnown RBP eCLIP13.26□□□□□ -0.29
SP140-207ENST00000456542 ARHGEF5Q12774 1597 aa13.26□□□□□ -0.29
SP140-207ENST00000456542 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
SP140-207ENST00000456542 ZNF644Q9H582 1327 aaPredicted RBP13.26□□□□□ -0.29
SP140-207ENST00000456542 BCORL1Q5H9F3 1711 aa13.25□□□□□ -0.29
SP140-207ENST00000456542 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
SP140-207ENST00000456542 ATP7AQ04656 1500 aa13.25□□□□□ -0.29
SP140-207ENST00000456542 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
SP140-207ENST00000456542 CCDC141Q6ZP82 1450 aa13.24□□□□□ -0.29
SP140-207ENST00000456542 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
SP140-207ENST00000456542 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
SP140-207ENST00000456542 SPAG9O60271 1321 aaKnown RBP13.23□□□□□ -0.29
SP140-207ENST00000456542 RTEL1-TNFRSF6BF6WH68 1400 aa13.22□□□□□ -0.29
SP140-207ENST00000456542 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
SP140-207ENST00000456542 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
SP140-207ENST00000456542 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
SP140-207ENST00000456542 AGLP35573 1532 aa13.21□□□□□ -0.29
SP140-207ENST00000456542 TCOF1Q13428 1488 aaKnown RBP13.21□□□□□ -0.3
SP140-207ENST00000456542 ADGBQ8N7X0 1667 aa13.21□□□□□ -0.3
SP140-207ENST00000456542 ARID4BQ4LE39 1312 aaPredicted RBP13.2□□□□□ -0.3
SP140-207ENST00000456542 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
SP140-207ENST00000456542 PLXNC1O60486 1568 aa13.19□□□□□ -0.3
SP140-207ENST00000456542 CROCC2H7BZ55 1655 aa13.18□□□□□ -0.3
SP140-207ENST00000456542 MADDQ8WXG6 1647 aa13.17□□□□□ -0.3
SP140-207ENST00000456542 FER1L4A9Z1Z3 1794 aa13.17□□□□□ -0.3
SP140-207ENST00000456542 DNMT1P26358 1616 aaKnown RBP13.17□□□□□ -0.3
SP140-207ENST00000456542 A2MP01023 1474 aa13.16□□□□□ -0.3
SP140-207ENST00000456542 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
SP140-207ENST00000456542 TSPY4P0CV99 314 aa13.15□□□□□ -0.3
SP140-207ENST00000456542 TSPY10P0CW01 314 aa13.15□□□□□ -0.3
SP140-207ENST00000456542 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.31
SP140-207ENST00000456542 DAPK1P53355 1430 aa13.13□□□□□ -0.31
SP140-207ENST00000456542 PTPRMP28827 1452 aa13.13□□□□□ -0.31
SP140-207ENST00000456542 ABCC5O15440 1437 aa13.13□□□□□ -0.31
SP140-207ENST00000456542 DHX29Q7Z478 1369 aaKnown RBP13.11□□□□□ -0.31
SP140-207ENST00000456542 MLECQ14165 292 aa13.1□□□□□ -0.31
SP140-207ENST00000456542 EIF2AK4Q9P2K8 1649 aaKnown RBP13.1□□□□□ -0.31
SP140-207ENST00000456542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.31
SP140-207ENST00000456542 MROH2AA6NES4 1674 aa13.08□□□□□ -0.32
SP140-207ENST00000456542 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.32
SP140-207ENST00000456542 CNTLNQ9NXG0 1405 aa13.07□□□□□ -0.32
SP140-207ENST00000456542 FAM50AQ14320 339 aaKnown RBP13.07□□□□□ -0.32
SP140-207ENST00000456542 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
SP140-207ENST00000456542 FAM135AQ9P2D6 1515 aa13.07□□□□□ -0.32
SP140-207ENST00000456542 RRBP1Q9P2E9 1410 aaKnown RBP13.06□□□□□ -0.32
SP140-207ENST00000456542 ADGRL2O95490 1459 aa13.06□□□□□ -0.32
SP140-207ENST00000456542 RNF17Q9BXT8 1623 aaKnown RBP13.06□□□□□ -0.32
SP140-207ENST00000456542 PPP6R1Q9UPN7 881 aa13.05□□□□□ -0.32
SP140-207ENST00000456542 ANKRD30AQ9BXX3 1397 aa13.05□□□□□ -0.32
SP140-207ENST00000456542 KIF15Q9NS87 1388 aa13.05□□□□□ -0.32
SP140-207ENST00000456542 ERBINQ96RT1 1412 aa13.05□□□□□ -0.32
SP140-207ENST00000456542 C3P01024 1663 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms