RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 FANCAO15360 1455 aa26.74■■□□□ 1.87
PMPCB-206ENST00000456433 CCNB3Q8WWL7 1395 aa26.71■■□□□ 1.87
PMPCB-206ENST00000456433 ITSN2Q9NZM3 1697 aa26.71■■□□□ 1.87
PMPCB-206ENST00000456433 ARHGAP5Q13017 1502 aa26.7■■□□□ 1.87
PMPCB-206ENST00000456433 KDM6BO15054 1643 aa26.7■■□□□ 1.86
PMPCB-206ENST00000456433 AKNAQ7Z591 1439 aa26.68■■□□□ 1.86
PMPCB-206ENST00000456433 EFCAB2Q5VUJ9 269 aa26.68■■□□□ 1.86
PMPCB-206ENST00000456433 COL17A1Q9UMD9 1497 aaPredicted RBP26.65■■□□□ 1.86
PMPCB-206ENST00000456433 ADGRL1O94910 1474 aa26.62■■□□□ 1.85
PMPCB-206ENST00000456433 CFDP1Q9UEE9 299 aaPredicted RBP26.6■■□□□ 1.85
PMPCB-206ENST00000456433 ABCC1P33527 1531 aa26.6■■□□□ 1.85
PMPCB-206ENST00000456433 MYOM3Q5VTT5 1437 aa26.59■■□□□ 1.85
PMPCB-206ENST00000456433 SAMD9LQ8IVG5 1584 aa26.58■■□□□ 1.85
PMPCB-206ENST00000456433 MIA2Q96PC5 1412 aa26.56■■□□□ 1.84
PMPCB-206ENST00000456433 DENND4BO75064 1496 aaPredicted RBP26.56■■□□□ 1.84
PMPCB-206ENST00000456433 PLEKHH2Q8IVE3 1493 aa26.56■■□□□ 1.84
PMPCB-206ENST00000456433 RICTORQ6R327 1708 aa26.56■■□□□ 1.84
PMPCB-206ENST00000456433 SCAPERQ9BY12 1400 aa26.55■■□□□ 1.84
PMPCB-206ENST00000456433 KIAA1107Q9UPP5 1409 aa26.55■■□□□ 1.84
PMPCB-206ENST00000456433 FRMPD1Q5SYB0 1578 aa26.54■■□□□ 1.84
PMPCB-206ENST00000456433 POGZQ7Z3K3 1410 aa26.53■■□□□ 1.84
PMPCB-206ENST00000456433 ARHGEF12Q9NZN5 1544 aa26.51■■□□□ 1.83
PMPCB-206ENST00000456433 ZMYM4Q5VZL5 1548 aa26.49■■□□□ 1.83
PMPCB-206ENST00000456433 SYCP2Q9BX26 1530 aa26.49■■□□□ 1.83
PMPCB-206ENST00000456433 CAMSAP2Q08AD1 1489 aa26.49■■□□□ 1.83
PMPCB-206ENST00000456433 ZNF518AQ6AHZ1 1483 aa26.49■■□□□ 1.83
PMPCB-206ENST00000456433 ZNF777Q9ULD5 760 aaPredicted RBP26.48■■□□□ 1.83
PMPCB-206ENST00000456433 FGD6Q6ZV73 1430 aa26.48■■□□□ 1.83
PMPCB-206ENST00000456433 KDM5CP41229 1560 aa26.47■■□□□ 1.83
PMPCB-206ENST00000456433 RAPGEF3O95398 923 aa26.47■■□□□ 1.83
PMPCB-206ENST00000456433 ZNF644Q9H582 1327 aaPredicted RBP26.44■■□□□ 1.82
PMPCB-206ENST00000456433 MBD5Q9P267 1494 aa26.44■■□□□ 1.82
PMPCB-206ENST00000456433 PTPN23Q9H3S7 1636 aa26.43■■□□□ 1.82
PMPCB-206ENST00000456433 TRAPPC8Q9Y2L5 1435 aa26.43■■□□□ 1.82
PMPCB-206ENST00000456433 TCOF1Q13428 1488 aaKnown RBP26.42■■□□□ 1.82
PMPCB-206ENST00000456433 MAGI2Q86UL8 1455 aa26.42■■□□□ 1.82
PMPCB-206ENST00000456433 ARHGEF5Q12774 1597 aa26.41■■□□□ 1.82
PMPCB-206ENST00000456433 PPARGC1BQ86YN6 1023 aaKnown RBP26.39■■□□□ 1.82
PMPCB-206ENST00000456433 HNRNPMP52272 730 aaKnown RBP eCLIP26.38■■□□□ 1.81
PMPCB-206ENST00000456433 MLH3Q9UHC1 1453 aa26.37■■□□□ 1.81
PMPCB-206ENST00000456433 RSPH4AQ5TD94 716 aa26.37■■□□□ 1.81
PMPCB-206ENST00000456433 AFAP1Q8N556 730 aa26.37■■□□□ 1.81
PMPCB-206ENST00000456433 HECW2Q9P2P5 1572 aa26.37■■□□□ 1.81
PMPCB-206ENST00000456433 CCDC141Q6ZP82 1450 aa26.36■■□□□ 1.81
PMPCB-206ENST00000456433 ARHGEF40Q8TER5 1519 aa26.36■■□□□ 1.81
PMPCB-206ENST00000456433 ZFYVE16Q7Z3T8 1539 aa26.34■■□□□ 1.81
PMPCB-206ENST00000456433 INO80Q9ULG1 1556 aaPredicted RBP26.32■■□□□ 1.8
PMPCB-206ENST00000456433 KIDINS220Q9ULH0 1771 aa26.31■■□□□ 1.8
PMPCB-206ENST00000456433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.3■■□□□ 1.8
PMPCB-206ENST00000456433 RRBP1Q9P2E9 1410 aaKnown RBP26.3■■□□□ 1.8
PMPCB-206ENST00000456433 DNMT1P26358 1616 aaKnown RBP26.29■■□□□ 1.8
PMPCB-206ENST00000456433 YEATS2Q9ULM3 1422 aa26.29■■□□□ 1.8
PMPCB-206ENST00000456433 SPAG9O60271 1321 aaKnown RBP26.28■■□□□ 1.8
PMPCB-206ENST00000456433 RTEL1-TNFRSF6BF6WH68 1400 aa26.28■■□□□ 1.8
PMPCB-206ENST00000456433 ATP7AQ04656 1500 aa26.28■■□□□ 1.8
PMPCB-206ENST00000456433 MAST1Q9Y2H9 1570 aa26.27■■□□□ 1.8
PMPCB-206ENST00000456433 CROCC2H7BZ55 1655 aa26.26■■□□□ 1.79
PMPCB-206ENST00000456433 ABCA6Q8N139 1617 aa26.25■■□□□ 1.79
PMPCB-206ENST00000456433 DIP2CQ9Y2E4 1556 aa26.25■■□□□ 1.79
PMPCB-206ENST00000456433 SHANK2Q9UPX8 1470 aa26.25■■□□□ 1.79
PMPCB-206ENST00000456433 ABCC5O15440 1437 aa26.24■■□□□ 1.79
PMPCB-206ENST00000456433 DAPK1P53355 1430 aa26.23■■□□□ 1.79
PMPCB-206ENST00000456433 REREQ9P2R6 1566 aa26.23■■□□□ 1.79
PMPCB-206ENST00000456433 ATP10AO60312 1499 aa26.23■■□□□ 1.79
PMPCB-206ENST00000456433 TSPY4P0CV99 314 aa26.2■■□□□ 1.78
PMPCB-206ENST00000456433 TSPY10P0CW01 314 aa26.2■■□□□ 1.78
PMPCB-206ENST00000456433 FAM50AQ14320 339 aaKnown RBP26.2■■□□□ 1.78
PMPCB-206ENST00000456433 C9orf84Q5VXU9 1444 aa26.2■■□□□ 1.78
PMPCB-206ENST00000456433 ADGBQ8N7X0 1667 aa26.17■■□□□ 1.78
PMPCB-206ENST00000456433 PLXNC1O60486 1568 aa26.16■■□□□ 1.78
PMPCB-206ENST00000456433 MYT1LQ9UL68 1186 aa26.16■■□□□ 1.78
PMPCB-206ENST00000456433 SIGLEC1Q9BZZ2 1709 aa26.13■■□□□ 1.77
PMPCB-206ENST00000456433 ADGRL2O95490 1459 aa26.12■■□□□ 1.77
PMPCB-206ENST00000456433 AGLP35573 1532 aa26.12■■□□□ 1.77
PMPCB-206ENST00000456433 A2MP01023 1474 aa26.11■■□□□ 1.77
PMPCB-206ENST00000456433 PTPRKQ15262 1439 aa26.08■■□□□ 1.77
PMPCB-206ENST00000456433 DHX29Q7Z478 1369 aaKnown RBP26.06■■□□□ 1.76
PMPCB-206ENST00000456433 NCOA1Q15788 1441 aa26.05■■□□□ 1.76
PMPCB-206ENST00000456433 ANKRD30AQ9BXX3 1397 aa26.05■■□□□ 1.76
PMPCB-206ENST00000456433 BCORL1Q5H9F3 1711 aa26.04■■□□□ 1.76
PMPCB-206ENST00000456433 ROCK1Q13464 1354 aa26.04■■□□□ 1.76
PMPCB-206ENST00000456433 DUOX2Q9NRD8 1548 aa26.04■■□□□ 1.76
PMPCB-206ENST00000456433 AEBP2Q6ZN18 517 aaPredicted RBP26.03■■□□□ 1.76
PMPCB-206ENST00000456433 KIF15Q9NS87 1388 aa26.02■■□□□ 1.76
PMPCB-206ENST00000456433 CHIC2Q9UKJ5 165 aa26■■□□□ 1.75
PMPCB-206ENST00000456433 EIF2AK4Q9P2K8 1649 aaKnown RBP25.99■■□□□ 1.75
PMPCB-206ENST00000456433 ARID4BQ4LE39 1312 aaPredicted RBP25.99■■□□□ 1.75
PMPCB-206ENST00000456433 ADAMTSL3P82987 1691 aa25.99■■□□□ 1.75
PMPCB-206ENST00000456433 ERBINQ96RT1 1412 aa25.97■■□□□ 1.75
PMPCB-206ENST00000456433 RRP7BPQ9NSQ0 103 aa25.94■■□□□ 1.74
PMPCB-206ENST00000456433 ITGAEP38570 1179 aa25.93■■□□□ 1.74
PMPCB-206ENST00000456433 RNF17Q9BXT8 1623 aaKnown RBP25.92■■□□□ 1.74
PMPCB-206ENST00000456433 KDM4FA0A1W2PPD8 638 aa25.9■■□□□ 1.74
PMPCB-206ENST00000456433 MADDQ8WXG6 1647 aa25.89■■□□□ 1.74
PMPCB-206ENST00000456433 ANKRD50Q9ULJ7 1429 aa25.88■■□□□ 1.73
PMPCB-206ENST00000456433 FAM135AQ9P2D6 1515 aa25.88■■□□□ 1.73
PMPCB-206ENST00000456433 FER1L4A9Z1Z3 1794 aa25.88■■□□□ 1.73
PMPCB-206ENST00000456433 KIF3BO15066 747 aa25.87■■□□□ 1.73
PMPCB-206ENST00000456433 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
PMPCB-206ENST00000456433 DEPDC5O75140 1603 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms