RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 MAPK8IP3Q9UPT6 1336 aa6.34□□□□□ -1.39
PCDH9-203ENST00000456367 RAB3GAP2Q9H2M9 1393 aa6.34□□□□□ -1.39
PCDH9-203ENST00000456367 KIF27Q86VH2 1401 aa6.34□□□□□ -1.4
PCDH9-203ENST00000456367 RWDD1Q9H446 243 aaPredicted RBP6.33□□□□□ -1.4
PCDH9-203ENST00000456367 CARD11Q9BXL7 1154 aa6.33□□□□□ -1.4
PCDH9-203ENST00000456367 CHIC2Q9UKJ5 165 aa6.33□□□□□ -1.4
PCDH9-203ENST00000456367 MRE11P49959 708 aa6.33□□□□□ -1.4
PCDH9-203ENST00000456367 CALD1Q05682 793 aaKnown RBP6.32□□□□□ -1.4
PCDH9-203ENST00000456367 KTN1Q86UP2 1357 aaKnown RBP6.32□□□□□ -1.4
PCDH9-203ENST00000456367 PHF14O94880 888 aa6.32□□□□□ -1.4
PCDH9-203ENST00000456367 TSPY4P0CV99 314 aa6.32□□□□□ -1.4
PCDH9-203ENST00000456367 TSPY10P0CW01 314 aa6.32□□□□□ -1.4
PCDH9-203ENST00000456367 HAP1P54257 671 aaPredicted RBP6.32□□□□□ -1.4
PCDH9-203ENST00000456367 NFKBIBQ15653 356 aa6.32□□□□□ -1.4
PCDH9-203ENST00000456367 SLKQ9H2G2 1235 aaPredicted RBP6.32□□□□□ -1.4
PCDH9-203ENST00000456367 BAZ1BQ9UIG0 1483 aaKnown RBP6.32□□□□□ -1.4
PCDH9-203ENST00000456367 GZF1Q9H116 711 aaPredicted RBP6.31□□□□□ -1.4
PCDH9-203ENST00000456367 MCCP23508 829 aa6.3□□□□□ -1.4
PCDH9-203ENST00000456367 RRP7BPQ9NSQ0 103 aa6.3□□□□□ -1.4
PCDH9-203ENST00000456367 RRP1P56182 461 aaKnown RBP6.3□□□□□ -1.4
PCDH9-203ENST00000456367 ZNF777Q9ULD5 760 aaPredicted RBP6.3□□□□□ -1.4
PCDH9-203ENST00000456367 CHMP5Q9NZZ3 219 aa6.3□□□□□ -1.4
PCDH9-203ENST00000456367 AAMPQ13685 434 aa6.3□□□□□ -1.4
PCDH9-203ENST00000456367 IL27Q8NEV9 243 aa6.29□□□□□ -1.4
PCDH9-203ENST00000456367 KDM2AQ9Y2K7 1162 aa6.29□□□□□ -1.4
PCDH9-203ENST00000456367 BAZ1AQ9NRL2 1556 aaPredicted RBP6.29□□□□□ -1.4
PCDH9-203ENST00000456367 ARHGAP35Q9NRY4 1499 aa6.29□□□□□ -1.4
PCDH9-203ENST00000456367 NLRP13Q86W25 1043 aa6.29□□□□□ -1.4
PCDH9-203ENST00000456367 PLCB2Q00722 1185 aa6.29□□□□□ -1.4
PCDH9-203ENST00000456367 TAF3Q5VWG9 929 aa6.29□□□□□ -1.4
PCDH9-203ENST00000456367 NGEFQ8N5V2 710 aa6.29□□□□□ -1.4
PCDH9-203ENST00000456367 PRKRIP1Q9H875 184 aaPredicted RBP6.29□□□□□ -1.4
PCDH9-203ENST00000456367 FRAT1Q92837 279 aaPredicted RBP6.28□□□□□ -1.4
PCDH9-203ENST00000456367 SOGA1O94964 1423 aa6.28□□□□□ -1.4
PCDH9-203ENST00000456367 TMF1P82094 1093 aa6.28□□□□□ -1.4
PCDH9-203ENST00000456367 FMN1Q68DA7 1419 aa6.28□□□□□ -1.4
PCDH9-203ENST00000456367 HTATSF1O43719 755 aaKnown RBP6.28□□□□□ -1.4
PCDH9-203ENST00000456367 GOLGA6L4A6NEF3 574 aa6.27□□□□□ -1.41
PCDH9-203ENST00000456367 IPO8O15397 1037 aaKnown RBP6.27□□□□□ -1.41
PCDH9-203ENST00000456367 KIF15Q9NS87 1388 aa6.27□□□□□ -1.41
PCDH9-203ENST00000456367 KCNH8Q96L42 1107 aa6.27□□□□□ -1.41
PCDH9-203ENST00000456367 CCDC66A2RUB6 948 aa6.27□□□□□ -1.41
PCDH9-203ENST00000456367 EIF3AQ14152 1382 aaKnown RBP6.27□□□□□ -1.41
PCDH9-203ENST00000456367 CGNL1Q0VF96 1302 aa6.26□□□□□ -1.41
PCDH9-203ENST00000456367 HMGN5P82970 282 aaKnown RBP6.26□□□□□ -1.41
PCDH9-203ENST00000456367 DRC7Q8IY82 874 aa6.26□□□□□ -1.41
PCDH9-203ENST00000456367 BRPF3Q9ULD4 1205 aa6.26□□□□□ -1.41
PCDH9-203ENST00000456367 KCNA4P22459 653 aa6.26□□□□□ -1.41
PCDH9-203ENST00000456367 GOLGA2Q08379 1002 aa6.26□□□□□ -1.41
PCDH9-203ENST00000456367 ZNF771Q7L3S4 317 aaPredicted RBP6.26□□□□□ -1.41
PCDH9-203ENST00000456367 MYBBP1AQ9BQG0 1328 aaKnown RBP6.26□□□□□ -1.41
PCDH9-203ENST00000456367 GOLGA6L1Q8N7Z2 621 aa6.26□□□□□ -1.41
PCDH9-203ENST00000456367 FAM13BQ9NYF5 915 aa6.26□□□□□ -1.41
PCDH9-203ENST00000456367 A0A0U1RQG5 324 aaPredicted RBP6.25□□□□□ -1.41
PCDH9-203ENST00000456367 MSH5O43196 834 aa6.25□□□□□ -1.41
PCDH9-203ENST00000456367 TAF7LQ5H9L4 462 aa6.25□□□□□ -1.41
PCDH9-203ENST00000456367 CCDC173Q0VFZ6 552 aa6.25□□□□□ -1.41
PCDH9-203ENST00000456367 DIAPH3Q9NSV4 1193 aa6.25□□□□□ -1.41
PCDH9-203ENST00000456367 DDX49Q9Y6V7 483 aaKnown RBP6.25□□□□□ -1.41
PCDH9-203ENST00000456367 C11orf95C9JLR9 678 aaPredicted RBP6.24□□□□□ -1.41
PCDH9-203ENST00000456367 TPM3P06753 285 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 FBXO3Q9UK99 471 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 PAK3O75914 559 aaPredicted RBP6.24□□□□□ -1.41
PCDH9-203ENST00000456367 TEX35Q5T0J7 233 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 SPRYD3Q8NCJ5 442 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 EXOC6Q8TAG9 804 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 PDCL3Q9H2J4 239 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 CCDC39Q9UFE4 941 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 KIF16BQ96L93 1317 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 NACADO15069 1562 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 SETQ01105 290 aaPredicted RBP6.24□□□□□ -1.41
PCDH9-203ENST00000456367 PABPN1Q86U42 306 aaKnown RBP eCLIP6.24□□□□□ -1.41
PCDH9-203ENST00000456367 BACH2Q9BYV9 841 aa6.24□□□□□ -1.41
PCDH9-203ENST00000456367 ST18O60284 1047 aa6.23□□□□□ -1.41
PCDH9-203ENST00000456367 GPS2Q13227 327 aa6.23□□□□□ -1.41
PCDH9-203ENST00000456367 CNTLNQ9NXG0 1405 aa6.23□□□□□ -1.41
PCDH9-203ENST00000456367 KANK4Q5T7N3 995 aaPredicted RBP6.23□□□□□ -1.41
PCDH9-203ENST00000456367 CALRP27797 417 aaKnown RBP6.22□□□□□ -1.41
PCDH9-203ENST00000456367 MFAP1P55081 439 aaKnown RBP6.22□□□□□ -1.41
PCDH9-203ENST00000456367 NOM1Q5C9Z4 860 aaKnown RBP6.22□□□□□ -1.41
PCDH9-203ENST00000456367 TPM4P67936 248 aa6.22□□□□□ -1.41
PCDH9-203ENST00000456367 NUCB2P80303 420 aa6.22□□□□□ -1.41
PCDH9-203ENST00000456367 SMG6Q86US8 1419 aaKnown RBP6.22□□□□□ -1.41
PCDH9-203ENST00000456367 CC2D1BQ5T0F9 858 aaKnown RBP6.22□□□□□ -1.41
PCDH9-203ENST00000456367 CCDC88BA6NC98 1476 aa6.22□□□□□ -1.41
PCDH9-203ENST00000456367 HMGB1P09429 215 aaKnown RBP6.22□□□□□ -1.41
PCDH9-203ENST00000456367 CENPJQ9HC77 1338 aaPredicted RBP6.21□□□□□ -1.41
PCDH9-203ENST00000456367 ATP6V1DQ9Y5K8 247 aa6.21□□□□□ -1.41
PCDH9-203ENST00000456367 ARID3AQ99856 593 aa6.21□□□□□ -1.42
PCDH9-203ENST00000456367 ESPNB1AK53 854 aa6.21□□□□□ -1.42
PCDH9-203ENST00000456367 SLC4A3P48751 1232 aa6.21□□□□□ -1.42
PCDH9-203ENST00000456367 NASPP49321 788 aaPredicted RBP6.21□□□□□ -1.42
PCDH9-203ENST00000456367 CRBNQ96SW2 442 aa6.21□□□□□ -1.42
PCDH9-203ENST00000456367 MPHOSPH9Q99550 1183 aa6.21□□□□□ -1.42
PCDH9-203ENST00000456367 TSPYL1Q9H0U9 437 aa6.21□□□□□ -1.42
PCDH9-203ENST00000456367 TRAK2O60296 914 aa6.2□□□□□ -1.42
PCDH9-203ENST00000456367 CWC15Q9P013 229 aaKnown RBP6.2□□□□□ -1.42
PCDH9-203ENST00000456367 E9PSI1 815 aa6.2□□□□□ -1.42
PCDH9-203ENST00000456367 R3HCC1Q9Y3T6 440 aaKnown RBP6.2□□□□□ -1.42
PCDH9-203ENST00000456367 PDCL2Q8N4E4 241 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms