RNA–Protein interactions for RNA: ENST00000455768.6

YIPF3-204, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-204ENST00000455768 POGZQ7Z3K3 1410 aa33.36■■■□□ 2.93
YIPF3-204ENST00000455768 CDK11AQ9UQ88 783 aaPredicted RBP33.35■■■□□ 2.93
YIPF3-204ENST00000455768 TROQ12816 1431 aaPredicted RBP33.35■■■□□ 2.93
YIPF3-204ENST00000455768 MAGI2Q86UL8 1455 aa33.32■■■□□ 2.92
YIPF3-204ENST00000455768 MYO5CQ9NQX4 1742 aa33.32■■■□□ 2.92
YIPF3-204ENST00000455768 EFCAB2Q5VUJ9 269 aa33.3■■■□□ 2.92
YIPF3-204ENST00000455768 RIMS1Q86UR5 1692 aaKnown RBP33.29■■■□□ 2.92
YIPF3-204ENST00000455768 PCF11O94913 1555 aaKnown RBP33.26■■■□□ 2.91
YIPF3-204ENST00000455768 CLIP1P30622 1438 aa33.23■■■□□ 2.91
YIPF3-204ENST00000455768 CASKIN1Q8WXD9 1431 aa33.23■■■□□ 2.91
YIPF3-204ENST00000455768 LMTK3Q96Q04 1460 aa33.22■■■□□ 2.91
YIPF3-204ENST00000455768 ARHGAP5Q13017 1502 aa33.22■■■□□ 2.91
YIPF3-204ENST00000455768 MLECQ14165 292 aa33.2■■■□□ 2.91
YIPF3-204ENST00000455768 ATP10AO60312 1499 aa33.18■■■□□ 2.9
YIPF3-204ENST00000455768 AFAP1Q8N556 730 aa33.17■■■□□ 2.9
YIPF3-204ENST00000455768 PLPPR3Q6T4P5 718 aa33.16■■■□□ 2.9
YIPF3-204ENST00000455768 CCDC18Q5T9S5 1454 aa33.14■■■□□ 2.9
YIPF3-204ENST00000455768 ZNF518AQ6AHZ1 1483 aa33.14■■■□□ 2.9
YIPF3-204ENST00000455768 CDC42BPBQ9Y5S2 1711 aa33.14■■■□□ 2.89
YIPF3-204ENST00000455768 C9orf84Q5VXU9 1444 aa33.13■■■□□ 2.89
YIPF3-204ENST00000455768 KDM5CP41229 1560 aa33.13■■■□□ 2.89
YIPF3-204ENST00000455768 ARHGEF12Q9NZN5 1544 aa33.08■■■□□ 2.89
YIPF3-204ENST00000455768 FYCO1Q9BQS8 1478 aa33.08■■■□□ 2.89
YIPF3-204ENST00000455768 PREX2Q70Z35 1606 aa33.08■■■□□ 2.89
YIPF3-204ENST00000455768 FER1L4A9Z1Z3 1794 aa33.08■■■□□ 2.89
YIPF3-204ENST00000455768 HSPA2P54652 639 aa33.06■■■□□ 2.88
YIPF3-204ENST00000455768 TRAPPC8Q9Y2L5 1435 aa33.04■■■□□ 2.88
YIPF3-204ENST00000455768 ABCC1P33527 1531 aa33.03■■■□□ 2.88
YIPF3-204ENST00000455768 DIP2CQ9Y2E4 1556 aa33.02■■■□□ 2.88
YIPF3-204ENST00000455768 MLH3Q9UHC1 1453 aa32.99■■■□□ 2.87
YIPF3-204ENST00000455768 CDC42BPAQ5VT25 1732 aa32.98■■■□□ 2.87
YIPF3-204ENST00000455768 MYT1LQ9UL68 1186 aa32.98■■■□□ 2.87
YIPF3-204ENST00000455768 ABCA6Q8N139 1617 aa32.98■■■□□ 2.87
YIPF3-204ENST00000455768 CEBPAP49715 358 aaPredicted RBP32.96■■■□□ 2.87
YIPF3-204ENST00000455768 ITSN2Q9NZM3 1697 aa32.95■■■□□ 2.87
YIPF3-204ENST00000455768 REREQ9P2R6 1566 aa32.93■■■□□ 2.86
YIPF3-204ENST00000455768 GPATCH8Q9UKJ3 1502 aaKnown RBP32.9■■■□□ 2.86
YIPF3-204ENST00000455768 FBXO41Q8TF61 875 aa32.88■■■□□ 2.85
YIPF3-204ENST00000455768 SAMD9LQ8IVG5 1584 aa32.87■■■□□ 2.85
YIPF3-204ENST00000455768 ZNF777Q9ULD5 760 aaPredicted RBP32.87■■■□□ 2.85
YIPF3-204ENST00000455768 KIDINS220Q9ULH0 1771 aa32.87■■■□□ 2.85
YIPF3-204ENST00000455768 AGLP35573 1532 aa32.84■■■□□ 2.85
YIPF3-204ENST00000455768 SYCP2Q9BX26 1530 aa32.82■■■□□ 2.85
YIPF3-204ENST00000455768 PREX1Q8TCU6 1659 aa32.8■■■□□ 2.84
YIPF3-204ENST00000455768 HNRNPMP52272 730 aaKnown RBP eCLIP32.79■■■□□ 2.84
YIPF3-204ENST00000455768 MTUS2Q5JR59 1369 aa32.75■■■□□ 2.83
YIPF3-204ENST00000455768 CCNB3Q8WWL7 1395 aa32.74■■■□□ 2.83
YIPF3-204ENST00000455768 CFDP1Q9UEE9 299 aaPredicted RBP32.74■■■□□ 2.83
YIPF3-204ENST00000455768 C3P01024 1663 aa32.73■■■□□ 2.83
YIPF3-204ENST00000455768 KIAA1107Q9UPP5 1409 aa32.72■■■□□ 2.83
YIPF3-204ENST00000455768 SPAG9O60271 1321 aaKnown RBP32.72■■■□□ 2.83
YIPF3-204ENST00000455768 CEP162Q5TB80 1403 aa32.71■■■□□ 2.83
YIPF3-204ENST00000455768 UHRF1BP1Q6BDS2 1440 aa32.69■■■□□ 2.82
YIPF3-204ENST00000455768 PLEKHH2Q8IVE3 1493 aa32.67■■■□□ 2.82
YIPF3-204ENST00000455768 ATP7AQ04656 1500 aa32.67■■■□□ 2.82
YIPF3-204ENST00000455768 ZNF644Q9H582 1327 aaPredicted RBP32.66■■■□□ 2.82
YIPF3-204ENST00000455768 TIAM1Q13009 1591 aa32.66■■■□□ 2.82
YIPF3-204ENST00000455768 SETD1BQ9UPS6 1966 aaKnown RBP32.65■■■□□ 2.82
YIPF3-204ENST00000455768 ESF1Q9H501 851 aaKnown RBP32.65■■■□□ 2.82
YIPF3-204ENST00000455768 INO80Q9ULG1 1556 aaPredicted RBP32.65■■■□□ 2.82
YIPF3-204ENST00000455768 STRCQ7RTU9 1775 aa32.64■■■□□ 2.82
YIPF3-204ENST00000455768 EHBP1L1Q8N3D4 1523 aa32.63■■■□□ 2.81
YIPF3-204ENST00000455768 CNTLNQ9NXG0 1405 aa32.61■■■□□ 2.81
YIPF3-204ENST00000455768 SUPT6HQ7KZ85 1726 aaKnown RBP32.6■■■□□ 2.81
YIPF3-204ENST00000455768 PLXNC1O60486 1568 aa32.6■■■□□ 2.81
YIPF3-204ENST00000455768 CERKQ8TCT0 537 aa32.59■■■□□ 2.81
YIPF3-204ENST00000455768 A2MP01023 1474 aa32.58■■■□□ 2.81
YIPF3-204ENST00000455768 MBD5Q9P267 1494 aa32.57■■■□□ 2.8
YIPF3-204ENST00000455768 ZMYM3Q14202 1370 aa32.53■■■□□ 2.8
YIPF3-204ENST00000455768 MROH2AA6NES4 1674 aa32.51■■■□□ 2.79
YIPF3-204ENST00000455768 DMRT2Q9Y5R5 561 aa32.49■■■□□ 2.79
YIPF3-204ENST00000455768 NPATQ14207 1427 aa32.48■■■□□ 2.79
YIPF3-204ENST00000455768 NCOA2Q15596 1464 aa32.48■■■□□ 2.79
YIPF3-204ENST00000455768 LOC105371045A0A1W2PR82 267 aa32.47■■■□□ 2.79
YIPF3-204ENST00000455768 CLTCQ00610 1675 aaKnown RBP32.46■■■□□ 2.79
YIPF3-204ENST00000455768 GGT6Q6P531 493 aa32.46■■■□□ 2.79
YIPF3-204ENST00000455768 ADGBQ8N7X0 1667 aa32.43■■■□□ 2.78
YIPF3-204ENST00000455768 PTPRTO14522 1441 aa32.43■■■□□ 2.78
YIPF3-204ENST00000455768 NCOA1Q15788 1441 aa32.43■■■□□ 2.78
YIPF3-204ENST00000455768 RTEL1-TNFRSF6BF6WH68 1400 aa32.42■■■□□ 2.78
YIPF3-204ENST00000455768 CAMSAP2Q08AD1 1489 aa32.4■■■□□ 2.78
YIPF3-204ENST00000455768 PTPRKQ15262 1439 aa32.39■■■□□ 2.78
YIPF3-204ENST00000455768 CCDC141Q6ZP82 1450 aa32.36■■■□□ 2.77
YIPF3-204ENST00000455768 VPS8Q8N3P4 1428 aa32.36■■■□□ 2.77
YIPF3-204ENST00000455768 DHX29Q7Z478 1369 aaKnown RBP32.36■■■□□ 2.77
YIPF3-204ENST00000455768 CAMSAP1Q5T5Y3 1602 aa32.36■■■□□ 2.77
YIPF3-204ENST00000455768 PPP6R1Q9UPN7 881 aa32.32■■■□□ 2.76
YIPF3-204ENST00000455768 MYO3AQ8NEV4 1616 aa32.32■■■□□ 2.76
YIPF3-204ENST00000455768 LRRC9Q6ZRR7 1453 aa32.31■■■□□ 2.76
YIPF3-204ENST00000455768 LTBP4Q8N2S1 1624 aa32.29■■■□□ 2.76
YIPF3-204ENST00000455768 ZNF142P52746 1687 aaPredicted RBP32.27■■■□□ 2.76
YIPF3-204ENST00000455768 NCKAP5LQ9HCH0 1330 aa32.27■■■□□ 2.76
YIPF3-204ENST00000455768 KIF3BO15066 747 aa32.27■■■□□ 2.76
YIPF3-204ENST00000455768 CEP170BQ9Y4F5 1589 aaPredicted RBP32.27■■■□□ 2.76
YIPF3-204ENST00000455768 KANK4Q5T7N3 995 aaPredicted RBP32.26■■■□□ 2.75
YIPF3-204ENST00000455768 RSPH4AQ5TD94 716 aa32.25■■■□□ 2.75
YIPF3-204ENST00000455768 ARHGEF5Q12774 1597 aa32.24■■■□□ 2.75
YIPF3-204ENST00000455768 FBXO31Q5XUX0 539 aaPredicted RBP32.2■■■□□ 2.75
YIPF3-204ENST00000455768 PLA2R1Q13018 1463 aa32.2■■■□□ 2.75
YIPF3-204ENST00000455768 TCOF1Q13428 1488 aaKnown RBP32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms