RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 YEATS2Q9ULM3 1422 aa28.98■■■□□ 2.23
CCDC144B-204ENST00000455629 RIMS1Q86UR5 1692 aaKnown RBP28.98■■■□□ 2.23
CCDC144B-204ENST00000455629 EFCAB2Q5VUJ9 269 aa28.96■■■□□ 2.23
CCDC144B-204ENST00000455629 KIF14Q15058 1648 aa28.95■■■□□ 2.23
CCDC144B-204ENST00000455629 PCF11O94913 1555 aaKnown RBP28.95■■■□□ 2.22
CCDC144B-204ENST00000455629 TROQ12816 1431 aaPredicted RBP28.94■■■□□ 2.22
CCDC144B-204ENST00000455629 SIGLEC1Q9BZZ2 1709 aa28.92■■■□□ 2.22
CCDC144B-204ENST00000455629 CLIP1P30622 1438 aa28.92■■■□□ 2.22
CCDC144B-204ENST00000455629 LMTK3Q96Q04 1460 aa28.91■■■□□ 2.22
CCDC144B-204ENST00000455629 LRRIQ1Q96JM4 1722 aa28.89■■■□□ 2.21
CCDC144B-204ENST00000455629 ATP10AO60312 1499 aa28.86■■■□□ 2.21
CCDC144B-204ENST00000455629 ARHGAP5Q13017 1502 aa28.86■■■□□ 2.21
CCDC144B-204ENST00000455629 ZNF518AQ6AHZ1 1483 aa28.85■■■□□ 2.21
CCDC144B-204ENST00000455629 C9orf84Q5VXU9 1444 aa28.84■■■□□ 2.21
CCDC144B-204ENST00000455629 FER1L4A9Z1Z3 1794 aa28.83■■■□□ 2.21
CCDC144B-204ENST00000455629 CASKIN1Q8WXD9 1431 aa28.82■■■□□ 2.2
CCDC144B-204ENST00000455629 CCDC18Q5T9S5 1454 aa28.82■■■□□ 2.2
CCDC144B-204ENST00000455629 MLECQ14165 292 aa28.81■■■□□ 2.2
CCDC144B-204ENST00000455629 KDM5CP41229 1560 aa28.79■■■□□ 2.2
CCDC144B-204ENST00000455629 ARHGEF12Q9NZN5 1544 aa28.78■■■□□ 2.2
CCDC144B-204ENST00000455629 CDC42BPBQ9Y5S2 1711 aa28.77■■■□□ 2.2
CCDC144B-204ENST00000455629 PLPPR3Q6T4P5 718 aa28.76■■■□□ 2.19
CCDC144B-204ENST00000455629 AFAP1Q8N556 730 aa28.75■■■□□ 2.19
CCDC144B-204ENST00000455629 FBXO41Q8TF61 875 aa28.75■■■□□ 2.19
CCDC144B-204ENST00000455629 PREX2Q70Z35 1606 aa28.73■■■□□ 2.19
CCDC144B-204ENST00000455629 FYCO1Q9BQS8 1478 aa28.71■■■□□ 2.19
CCDC144B-204ENST00000455629 HSPA2P54652 639 aa28.7■■■□□ 2.18
CCDC144B-204ENST00000455629 MLH3Q9UHC1 1453 aa28.69■■■□□ 2.18
CCDC144B-204ENST00000455629 REREQ9P2R6 1566 aa28.68■■■□□ 2.18
CCDC144B-204ENST00000455629 DIP2CQ9Y2E4 1556 aa28.68■■■□□ 2.18
CCDC144B-204ENST00000455629 MYT1LQ9UL68 1186 aa28.68■■■□□ 2.18
CCDC144B-204ENST00000455629 ABCC1P33527 1531 aa28.68■■■□□ 2.18
CCDC144B-204ENST00000455629 ITSN2Q9NZM3 1697 aa28.64■■■□□ 2.17
CCDC144B-204ENST00000455629 CDC42BPAQ5VT25 1732 aa28.63■■■□□ 2.17
CCDC144B-204ENST00000455629 ABCA6Q8N139 1617 aa28.63■■■□□ 2.17
CCDC144B-204ENST00000455629 TRAPPC8Q9Y2L5 1435 aa28.62■■■□□ 2.17
CCDC144B-204ENST00000455629 PREX1Q8TCU6 1659 aa28.62■■■□□ 2.17
CCDC144B-204ENST00000455629 AGLP35573 1532 aa28.59■■■□□ 2.17
CCDC144B-204ENST00000455629 CEBPAP49715 358 aaPredicted RBP28.57■■■□□ 2.16
CCDC144B-204ENST00000455629 KIDINS220Q9ULH0 1771 aa28.55■■■□□ 2.16
CCDC144B-204ENST00000455629 SETD1BQ9UPS6 1966 aaKnown RBP28.54■■■□□ 2.16
CCDC144B-204ENST00000455629 GPATCH8Q9UKJ3 1502 aaKnown RBP28.52■■■□□ 2.16
CCDC144B-204ENST00000455629 SAMD9LQ8IVG5 1584 aa28.5■■■□□ 2.15
CCDC144B-204ENST00000455629 UHRF1BP1Q6BDS2 1440 aa28.5■■■□□ 2.15
CCDC144B-204ENST00000455629 ESF1Q9H501 851 aaKnown RBP28.49■■■□□ 2.15
CCDC144B-204ENST00000455629 ZNF777Q9ULD5 760 aaPredicted RBP28.49■■■□□ 2.15
CCDC144B-204ENST00000455629 C3P01024 1663 aa28.48■■■□□ 2.15
CCDC144B-204ENST00000455629 SYCP2Q9BX26 1530 aa28.47■■■□□ 2.15
CCDC144B-204ENST00000455629 PLEKHH2Q8IVE3 1493 aa28.45■■■□□ 2.14
CCDC144B-204ENST00000455629 CNTLNQ9NXG0 1405 aa28.44■■■□□ 2.14
CCDC144B-204ENST00000455629 KIAA1107Q9UPP5 1409 aa28.44■■■□□ 2.14
CCDC144B-204ENST00000455629 DMRT2Q9Y5R5 561 aa28.43■■■□□ 2.14
CCDC144B-204ENST00000455629 SPAG9O60271 1321 aaKnown RBP28.43■■■□□ 2.14
CCDC144B-204ENST00000455629 CCNB3Q8WWL7 1395 aa28.42■■■□□ 2.14
CCDC144B-204ENST00000455629 CERKQ8TCT0 537 aa28.42■■■□□ 2.14
CCDC144B-204ENST00000455629 CFDP1Q9UEE9 299 aaPredicted RBP28.42■■■□□ 2.14
CCDC144B-204ENST00000455629 MTUS2Q5JR59 1369 aa28.41■■■□□ 2.14
CCDC144B-204ENST00000455629 HNRNPMP52272 730 aaKnown RBP eCLIP28.41■■■□□ 2.14
CCDC144B-204ENST00000455629 STRCQ7RTU9 1775 aa28.41■■■□□ 2.14
CCDC144B-204ENST00000455629 ATP7AQ04656 1500 aa28.38■■■□□ 2.13
CCDC144B-204ENST00000455629 INO80Q9ULG1 1556 aaPredicted RBP28.36■■■□□ 2.13
CCDC144B-204ENST00000455629 MROH2AA6NES4 1674 aa28.35■■■□□ 2.13
CCDC144B-204ENST00000455629 SUPT6HQ7KZ85 1726 aaKnown RBP28.33■■■□□ 2.13
CCDC144B-204ENST00000455629 EHBP1L1Q8N3D4 1523 aa28.32■■■□□ 2.12
CCDC144B-204ENST00000455629 PLXNC1O60486 1568 aa28.32■■■□□ 2.12
CCDC144B-204ENST00000455629 NPATQ14207 1427 aa28.31■■■□□ 2.12
CCDC144B-204ENST00000455629 A2MP01023 1474 aa28.3■■■□□ 2.12
CCDC144B-204ENST00000455629 TIAM1Q13009 1591 aa28.29■■■□□ 2.12
CCDC144B-204ENST00000455629 PTPRTO14522 1441 aa28.28■■■□□ 2.12
CCDC144B-204ENST00000455629 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
CCDC144B-204ENST00000455629 ZMYM3Q14202 1370 aa28.27■■■□□ 2.12
CCDC144B-204ENST00000455629 ADGBQ8N7X0 1667 aa28.25■■■□□ 2.11
CCDC144B-204ENST00000455629 MBD5Q9P267 1494 aa28.23■■■□□ 2.11
CCDC144B-204ENST00000455629 CLTCQ00610 1675 aaKnown RBP28.23■■■□□ 2.11
CCDC144B-204ENST00000455629 ZNF644Q9H582 1327 aaPredicted RBP28.22■■■□□ 2.11
CCDC144B-204ENST00000455629 NCOA1Q15788 1441 aa28.22■■■□□ 2.11
CCDC144B-204ENST00000455629 PPP6R1Q9UPN7 881 aa28.2■■■□□ 2.1
CCDC144B-204ENST00000455629 RTEL1-TNFRSF6BF6WH68 1400 aa28.19■■■□□ 2.1
CCDC144B-204ENST00000455629 GGT6Q6P531 493 aa28.17■■■□□ 2.1
CCDC144B-204ENST00000455629 CAMSAP1Q5T5Y3 1602 aa28.16■■■□□ 2.1
CCDC144B-204ENST00000455629 PTPRKQ15262 1439 aa28.14■■■□□ 2.1
CCDC144B-204ENST00000455629 NCOA2Q15596 1464 aa28.14■■■□□ 2.09
CCDC144B-204ENST00000455629 MYO3AQ8NEV4 1616 aa28.13■■■□□ 2.09
CCDC144B-204ENST00000455629 ZNF142P52746 1687 aaPredicted RBP28.13■■■□□ 2.09
CCDC144B-204ENST00000455629 DHX29Q7Z478 1369 aaKnown RBP28.11■■■□□ 2.09
CCDC144B-204ENST00000455629 CCDC141Q6ZP82 1450 aa28.1■■■□□ 2.09
CCDC144B-204ENST00000455629 RSPH4AQ5TD94 716 aa28.1■■■□□ 2.09
CCDC144B-204ENST00000455629 LTBP4Q8N2S1 1624 aa28.1■■■□□ 2.09
CCDC144B-204ENST00000455629 CAMSAP2Q08AD1 1489 aa28.08■■■□□ 2.09
CCDC144B-204ENST00000455629 CEP170BQ9Y4F5 1589 aaPredicted RBP28.08■■■□□ 2.09
CCDC144B-204ENST00000455629 PLA2R1Q13018 1463 aa28.08■■■□□ 2.09
CCDC144B-204ENST00000455629 IQSEC2Q5JU85 1478 aa28.06■■■□□ 2.08
CCDC144B-204ENST00000455629 PKD2Q13563 968 aa28.04■■■□□ 2.08
CCDC144B-204ENST00000455629 FAM135AQ9P2D6 1515 aa28.02■■■□□ 2.08
CCDC144B-204ENST00000455629 NCKAP5LQ9HCH0 1330 aa28.02■■■□□ 2.08
CCDC144B-204ENST00000455629 KIF3BO15066 747 aa28.01■■■□□ 2.07
CCDC144B-204ENST00000455629 ARHGEF5Q12774 1597 aa28.01■■■□□ 2.07
CCDC144B-204ENST00000455629 TCOF1Q13428 1488 aaKnown RBP28.01■■■□□ 2.07
CCDC144B-204ENST00000455629 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.07
CCDC144B-204ENST00000455629 A2ML1A8K2U0 1454 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms