RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 EFCAB2Q5VUJ9 269 aa16.53■□□□□ 0.24
SYPL1-202ENST00000455385 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
SYPL1-202ENST00000455385 PPRC1Q5VV67 1664 aaKnown RBP16.52■□□□□ 0.24
SYPL1-202ENST00000455385 ARHGAP5Q13017 1502 aa16.52■□□□□ 0.23
SYPL1-202ENST00000455385 FGD6Q6ZV73 1430 aa16.52■□□□□ 0.23
SYPL1-202ENST00000455385 ARAP3Q8WWN8 1544 aa16.51■□□□□ 0.23
SYPL1-202ENST00000455385 MIA2Q96PC5 1412 aa16.51■□□□□ 0.23
SYPL1-202ENST00000455385 ITSN2Q9NZM3 1697 aa16.51■□□□□ 0.23
SYPL1-202ENST00000455385 FANCAO15360 1455 aa16.5■□□□□ 0.23
SYPL1-202ENST00000455385 AKNAQ7Z591 1439 aa16.47■□□□□ 0.23
SYPL1-202ENST00000455385 RRBP1Q9P2E9 1410 aaKnown RBP16.47■□□□□ 0.23
SYPL1-202ENST00000455385 SAMD9LQ8IVG5 1584 aa16.47■□□□□ 0.23
SYPL1-202ENST00000455385 PTPN23Q9H3S7 1636 aa16.46■□□□□ 0.23
SYPL1-202ENST00000455385 HNRNPMP52272 730 aaKnown RBP eCLIP16.45■□□□□ 0.22
SYPL1-202ENST00000455385 FAM50AQ14320 339 aaKnown RBP16.45■□□□□ 0.22
SYPL1-202ENST00000455385 NEO1Q92859 1461 aa16.45■□□□□ 0.22
SYPL1-202ENST00000455385 CAMSAP2Q08AD1 1489 aa16.44■□□□□ 0.22
SYPL1-202ENST00000455385 TCOF1Q13428 1488 aaKnown RBP16.44■□□□□ 0.22
SYPL1-202ENST00000455385 TEX14Q8IWB6 1497 aa16.44■□□□□ 0.22
SYPL1-202ENST00000455385 ARHGEF12Q9NZN5 1544 aa16.44■□□□□ 0.22
SYPL1-202ENST00000455385 SCAPERQ9BY12 1400 aa16.42■□□□□ 0.22
SYPL1-202ENST00000455385 ADGRL1O94910 1474 aa16.41■□□□□ 0.22
SYPL1-202ENST00000455385 MBD5Q9P267 1494 aa16.41■□□□□ 0.22
SYPL1-202ENST00000455385 KIAA1107Q9UPP5 1409 aa16.41■□□□□ 0.22
SYPL1-202ENST00000455385 COL17A1Q9UMD9 1497 aaPredicted RBP16.41■□□□□ 0.22
SYPL1-202ENST00000455385 CFAP74Q9C0B2 1584 aa16.41■□□□□ 0.22
SYPL1-202ENST00000455385 ABCC1P33527 1531 aa16.4■□□□□ 0.22
SYPL1-202ENST00000455385 SYCP2Q9BX26 1530 aa16.4■□□□□ 0.22
SYPL1-202ENST00000455385 AFAP1Q8N556 730 aa16.4■□□□□ 0.22
SYPL1-202ENST00000455385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.39■□□□□ 0.212e-8■□□□□ 11
SYPL1-202ENST00000455385 TRAPPC8Q9Y2L5 1435 aa16.39■□□□□ 0.21
SYPL1-202ENST00000455385 RAPGEF3O95398 923 aa16.39■□□□□ 0.21
SYPL1-202ENST00000455385 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
SYPL1-202ENST00000455385 ABCC5O15440 1437 aa16.36■□□□□ 0.21
SYPL1-202ENST00000455385 ITGAEP38570 1179 aa16.36■□□□□ 0.21
SYPL1-202ENST00000455385 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
SYPL1-202ENST00000455385 TRIM26Q12899 539 aaPredicted RBP16.35■□□□□ 0.21
SYPL1-202ENST00000455385 PTPRKQ15262 1439 aa16.35■□□□□ 0.21
SYPL1-202ENST00000455385 RSPH4AQ5TD94 716 aa16.34■□□□□ 0.21
SYPL1-202ENST00000455385 ARHGEF5Q12774 1597 aa16.34■□□□□ 0.21
SYPL1-202ENST00000455385 DAPK1P53355 1430 aa16.34■□□□□ 0.21
SYPL1-202ENST00000455385 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.21
SYPL1-202ENST00000455385 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
SYPL1-202ENST00000455385 CCDC141Q6ZP82 1450 aa16.32■□□□□ 0.2
SYPL1-202ENST00000455385 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
SYPL1-202ENST00000455385 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
SYPL1-202ENST00000455385 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
SYPL1-202ENST00000455385 TSPY4P0CV99 314 aa16.31■□□□□ 0.2
SYPL1-202ENST00000455385 TSPY10P0CW01 314 aa16.31■□□□□ 0.2
SYPL1-202ENST00000455385 ZNF518AQ6AHZ1 1483 aa16.31■□□□□ 0.2
SYPL1-202ENST00000455385 KDM6BO15054 1643 aa16.29■□□□□ 0.2
SYPL1-202ENST00000455385 SPAG9O60271 1321 aaKnown RBP16.29■□□□□ 0.2
SYPL1-202ENST00000455385 KDM5CP41229 1560 aa16.28■□□□□ 0.2
SYPL1-202ENST00000455385 C9orf84Q5VXU9 1444 aa16.27■□□□□ 0.2
SYPL1-202ENST00000455385 CROCC2H7BZ55 1655 aa16.26■□□□□ 0.19
SYPL1-202ENST00000455385 MLH3Q9UHC1 1453 aa16.25■□□□□ 0.19
SYPL1-202ENST00000455385 SHANK2Q9UPX8 1470 aa16.25■□□□□ 0.19
SYPL1-202ENST00000455385 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
SYPL1-202ENST00000455385 MYT1LQ9UL68 1186 aa16.24■□□□□ 0.19
SYPL1-202ENST00000455385 KIDINS220Q9ULH0 1771 aa16.24■□□□□ 0.19
SYPL1-202ENST00000455385 MAST1Q9Y2H9 1570 aa16.24■□□□□ 0.19
SYPL1-202ENST00000455385 RRP7BPQ9NSQ0 103 aa16.24■□□□□ 0.19
SYPL1-202ENST00000455385 NCOA1Q15788 1441 aa16.23■□□□□ 0.19
SYPL1-202ENST00000455385 ZMYM4Q5VZL5 1548 aa16.23■□□□□ 0.19
SYPL1-202ENST00000455385 PCGF6Q9BYE7 350 aa16.23■□□□□ 0.19
SYPL1-202ENST00000455385 YEATS2Q9ULM3 1422 aa16.23■□□□□ 0.19
SYPL1-202ENST00000455385 ZFYVE16Q7Z3T8 1539 aa16.23■□□□□ 0.19
SYPL1-202ENST00000455385 INO80Q9ULG1 1556 aaPredicted RBP16.22■□□□□ 0.19
SYPL1-202ENST00000455385 ATP7AQ04656 1500 aa16.22■□□□□ 0.19
SYPL1-202ENST00000455385 HECW2Q9P2P5 1572 aa16.22■□□□□ 0.19
SYPL1-202ENST00000455385 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
SYPL1-202ENST00000455385 ROCK1Q13464 1354 aa16.2■□□□□ 0.18
SYPL1-202ENST00000455385 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
SYPL1-202ENST00000455385 MAGI2Q86UL8 1455 aa16.2■□□□□ 0.18
SYPL1-202ENST00000455385 KIF15Q9NS87 1388 aa16.18■□□□□ 0.18
SYPL1-202ENST00000455385 ABCA6Q8N139 1617 aa16.18■□□□□ 0.18
SYPL1-202ENST00000455385 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
SYPL1-202ENST00000455385 PLXNC1O60486 1568 aa16.16■□□□□ 0.18
SYPL1-202ENST00000455385 DIP2CQ9Y2E4 1556 aa16.16■□□□□ 0.18
SYPL1-202ENST00000455385 NAIPQ13075 1403 aa16.16■□□□□ 0.18
SYPL1-202ENST00000455385 HFM1A2PYH4 1435 aa16.15■□□□□ 0.18
SYPL1-202ENST00000455385 ATP10AO60312 1499 aa16.15■□□□□ 0.18
SYPL1-202ENST00000455385 DHX29Q7Z478 1369 aaKnown RBP16.14■□□□□ 0.17
SYPL1-202ENST00000455385 ARHGEF40Q8TER5 1519 aa16.13■□□□□ 0.17
SYPL1-202ENST00000455385 A2MP01023 1474 aa16.13■□□□□ 0.17
SYPL1-202ENST00000455385 DUOX2Q9NRD8 1548 aa16.12■□□□□ 0.17
SYPL1-202ENST00000455385 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
SYPL1-202ENST00000455385 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
SYPL1-202ENST00000455385 SIGLEC1Q9BZZ2 1709 aa16.1■□□□□ 0.17
SYPL1-202ENST00000455385 GCC2Q8IWJ2 1684 aa16.09■□□□□ 0.17
SYPL1-202ENST00000455385 KIF3BO15066 747 aa16.08■□□□□ 0.16
SYPL1-202ENST00000455385 ERBINQ96RT1 1412 aa16.08■□□□□ 0.16
SYPL1-202ENST00000455385 RAB3GAP2Q9H2M9 1393 aa16.07■□□□□ 0.16
SYPL1-202ENST00000455385 REREQ9P2R6 1566 aa16.07■□□□□ 0.16
SYPL1-202ENST00000455385 ARID4BQ4LE39 1312 aaPredicted RBP16.04■□□□□ 0.16
SYPL1-202ENST00000455385 AGLP35573 1532 aa16.04■□□□□ 0.16
SYPL1-202ENST00000455385 HRCP23327 699 aa16.03■□□□□ 0.16
SYPL1-202ENST00000455385 GGT6Q6P531 493 aa16.03■□□□□ 0.16
SYPL1-202ENST00000455385 MLECQ14165 292 aa16.02■□□□□ 0.16
SYPL1-202ENST00000455385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms