RNA–Protein interactions for RNA: ENST00000455099.6

PAX6-212, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-212ENST00000455099 SCAPERQ9BY12 1400 aa28.31■■■□□ 2.12
PAX6-212ENST00000455099 ARHGEF40Q8TER5 1519 aa28.3■■■□□ 2.12
PAX6-212ENST00000455099 ZMYM4Q5VZL5 1548 aa28.29■■■□□ 2.12
PAX6-212ENST00000455099 POGZQ7Z3K3 1410 aa28.29■■■□□ 2.12
PAX6-212ENST00000455099 CDC42BPAQ5VT25 1732 aa28.28■■■□□ 2.12
PAX6-212ENST00000455099 EFCAB2Q5VUJ9 269 aa28.27■■■□□ 2.12
PAX6-212ENST00000455099 YEATS2Q9ULM3 1422 aa28.25■■■□□ 2.11
PAX6-212ENST00000455099 SIGLEC1Q9BZZ2 1709 aa28.21■■■□□ 2.11
PAX6-212ENST00000455099 VPS8Q8N3P4 1428 aa28.21■■■□□ 2.11
PAX6-212ENST00000455099 ZFYVE16Q7Z3T8 1539 aa28.21■■■□□ 2.11
PAX6-212ENST00000455099 MTUS2Q5JR59 1369 aa28.21■■■□□ 2.11
PAX6-212ENST00000455099 ABCC1P33527 1531 aa28.2■■■□□ 2.1
PAX6-212ENST00000455099 ARHGEF12Q9NZN5 1544 aa28.2■■■□□ 2.1
PAX6-212ENST00000455099 EHBP1L1Q8N3D4 1523 aa28.19■■■□□ 2.1
PAX6-212ENST00000455099 GPATCH8Q9UKJ3 1502 aaKnown RBP28.19■■■□□ 2.1
PAX6-212ENST00000455099 KDM5CP41229 1560 aa28.16■■■□□ 2.1
PAX6-212ENST00000455099 SAMD9LQ8IVG5 1584 aa28.16■■■□□ 2.1
PAX6-212ENST00000455099 ITSN2Q9NZM3 1697 aa28.15■■■□□ 2.1
PAX6-212ENST00000455099 TIAM1Q13009 1591 aa28.15■■■□□ 2.1
PAX6-212ENST00000455099 ZNF518AQ6AHZ1 1483 aa28.15■■■□□ 2.1
PAX6-212ENST00000455099 TRAPPC8Q9Y2L5 1435 aa28.13■■■□□ 2.09
PAX6-212ENST00000455099 AFAP1Q8N556 730 aa28.13■■■□□ 2.09
PAX6-212ENST00000455099 MAGI2Q86UL8 1455 aa28.13■■■□□ 2.09
PAX6-212ENST00000455099 ADAMTSL3P82987 1691 aa28.12■■■□□ 2.09
PAX6-212ENST00000455099 BCORL1Q5H9F3 1711 aa28.12■■■□□ 2.09
PAX6-212ENST00000455099 CCNB3Q8WWL7 1395 aa28.1■■■□□ 2.09
PAX6-212ENST00000455099 SYCP2Q9BX26 1530 aa28.09■■■□□ 2.09
PAX6-212ENST00000455099 HECW2Q9P2P5 1572 aa28.08■■■□□ 2.09
PAX6-212ENST00000455099 ZNF777Q9ULD5 760 aaPredicted RBP28.08■■■□□ 2.09
PAX6-212ENST00000455099 ARID4BQ4LE39 1312 aaPredicted RBP28.08■■■□□ 2.09
PAX6-212ENST00000455099 MADDQ8WXG6 1647 aa28.06■■■□□ 2.08
PAX6-212ENST00000455099 ABCA6Q8N139 1617 aa28.04■■■□□ 2.08
PAX6-212ENST00000455099 DIP2CQ9Y2E4 1556 aa28.04■■■□□ 2.08
PAX6-212ENST00000455099 NCOA2Q15596 1464 aa28.03■■■□□ 2.08
PAX6-212ENST00000455099 SUPT6HQ7KZ85 1726 aaKnown RBP28.02■■■□□ 2.08
PAX6-212ENST00000455099 CFDP1Q9UEE9 299 aaPredicted RBP28.02■■■□□ 2.08
PAX6-212ENST00000455099 ATP10AO60312 1499 aa28.02■■■□□ 2.08
PAX6-212ENST00000455099 LRRC9Q6ZRR7 1453 aa28.01■■■□□ 2.07
PAX6-212ENST00000455099 C9orf84Q5VXU9 1444 aa28.01■■■□□ 2.07
PAX6-212ENST00000455099 MLH3Q9UHC1 1453 aa28■■■□□ 2.07
PAX6-212ENST00000455099 ZNF644Q9H582 1327 aaPredicted RBP27.99■■■□□ 2.07
PAX6-212ENST00000455099 PTPRMP28827 1452 aa27.98■■■□□ 2.07
PAX6-212ENST00000455099 HNRNPMP52272 730 aaKnown RBP eCLIP27.98■■■□□ 2.07
PAX6-212ENST00000455099 KANK4Q5T7N3 995 aaPredicted RBP27.98■■■□□ 2.07
PAX6-212ENST00000455099 KIDINS220Q9ULH0 1771 aa27.98■■■□□ 2.07
PAX6-212ENST00000455099 RIMS1Q86UR5 1692 aaKnown RBP27.96■■■□□ 2.07
PAX6-212ENST00000455099 MYT1LQ9UL68 1186 aa27.95■■■□□ 2.06
PAX6-212ENST00000455099 MAP3K1Q13233 1512 aa27.94■■■□□ 2.06
PAX6-212ENST00000455099 KIAA1107Q9UPP5 1409 aa27.93■■■□□ 2.06
PAX6-212ENST00000455099 MLECQ14165 292 aa27.93■■■□□ 2.06
PAX6-212ENST00000455099 PLEKHH2Q8IVE3 1493 aa27.92■■■□□ 2.06
PAX6-212ENST00000455099 REREQ9P2R6 1566 aa27.9■■■□□ 2.06
PAX6-212ENST00000455099 INO80Q9ULG1 1556 aaPredicted RBP27.9■■■□□ 2.06
PAX6-212ENST00000455099 MBD5Q9P267 1494 aa27.89■■■□□ 2.05
PAX6-212ENST00000455099 ATP7AQ04656 1500 aa27.87■■■□□ 2.05
PAX6-212ENST00000455099 FER1L4A9Z1Z3 1794 aa27.87■■■□□ 2.05
PAX6-212ENST00000455099 CAMSAP2Q08AD1 1489 aa27.87■■■□□ 2.05
PAX6-212ENST00000455099 SPAG9O60271 1321 aaKnown RBP27.85■■■□□ 2.05
PAX6-212ENST00000455099 PLPPR3Q6T4P5 718 aa27.8■■■□□ 2.04
PAX6-212ENST00000455099 AGLP35573 1532 aa27.8■■■□□ 2.04
PAX6-212ENST00000455099 PLXNC1O60486 1568 aa27.76■■■□□ 2.03
PAX6-212ENST00000455099 CCDC141Q6ZP82 1450 aa27.76■■■□□ 2.03
PAX6-212ENST00000455099 MYOM3Q5VTT5 1437 aa27.75■■■□□ 2.03
PAX6-212ENST00000455099 A2MP01023 1474 aa27.72■■■□□ 2.03
PAX6-212ENST00000455099 APLP2Q06481 763 aa27.71■■■□□ 2.03
PAX6-212ENST00000455099 ARHGEF5Q12774 1597 aa27.71■■■□□ 2.03
PAX6-212ENST00000455099 ADGBQ8N7X0 1667 aa27.69■■■□□ 2.02
PAX6-212ENST00000455099 LMTK3Q96Q04 1460 aa27.69■■■□□ 2.02
PAX6-212ENST00000455099 CEBPAP49715 358 aaPredicted RBP27.68■■■□□ 2.02
PAX6-212ENST00000455099 RTEL1-TNFRSF6BF6WH68 1400 aa27.67■■■□□ 2.02
PAX6-212ENST00000455099 MIA2Q96PC5 1412 aa27.67■■■□□ 2.02
PAX6-212ENST00000455099 C3P01024 1663 aa27.62■■■□□ 2.01
PAX6-212ENST00000455099 PTPN23Q9H3S7 1636 aa27.61■■■□□ 2.01
PAX6-212ENST00000455099 FGD6Q6ZV73 1430 aa27.58■■■□□ 2
PAX6-212ENST00000455099 MAST1Q9Y2H9 1570 aa27.57■■■□□ 2
PAX6-212ENST00000455099 RSPH4AQ5TD94 716 aa27.56■■■□□ 2
PAX6-212ENST00000455099 DHX29Q7Z478 1369 aaKnown RBP27.56■■■□□ 2
PAX6-212ENST00000455099 CLTCQ00610 1675 aaKnown RBP27.55■■■□□ 2
PAX6-212ENST00000455099 HSPA2P54652 639 aa27.54■■■□□ 2
PAX6-212ENST00000455099 TCOF1Q13428 1488 aaKnown RBP27.53■■■□□ 2
PAX6-212ENST00000455099 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
PAX6-212ENST00000455099 CNTLNQ9NXG0 1405 aa27.52■■■□□ 2
PAX6-212ENST00000455099 GGT6Q6P531 493 aa27.52■■■□□ 2
PAX6-212ENST00000455099 PREX1Q8TCU6 1659 aa27.52■■■□□ 2
PAX6-212ENST00000455099 TSPY4P0CV99 314 aa27.51■■□□□ 1.99
PAX6-212ENST00000455099 TSPY10P0CW01 314 aa27.51■■□□□ 1.99
PAX6-212ENST00000455099 ESF1Q9H501 851 aaKnown RBP27.51■■□□□ 1.99
PAX6-212ENST00000455099 MROH2AA6NES4 1674 aa27.51■■□□□ 1.99
PAX6-212ENST00000455099 ABCC5O15440 1437 aa27.5■■□□□ 1.99
PAX6-212ENST00000455099 DNMT1P26358 1616 aaKnown RBP27.48■■□□□ 1.99
PAX6-212ENST00000455099 DAPK1P53355 1430 aa27.47■■□□□ 1.99
PAX6-212ENST00000455099 KIF3BO15066 747 aa27.46■■□□□ 1.99
PAX6-212ENST00000455099 SHANK2Q9UPX8 1470 aa27.45■■□□□ 1.99
PAX6-212ENST00000455099 ZMYM3Q14202 1370 aa27.45■■□□□ 1.98
PAX6-212ENST00000455099 PPARGC1BQ86YN6 1023 aaKnown RBP27.43■■□□□ 1.98
PAX6-212ENST00000455099 UHRF1BP1Q6BDS2 1440 aa27.41■■□□□ 1.98
PAX6-212ENST00000455099 RNF17Q9BXT8 1623 aaKnown RBP27.39■■□□□ 1.98
PAX6-212ENST00000455099 KDM5DQ9BY66 1539 aa27.38■■□□□ 1.97
PAX6-212ENST00000455099 MROH1Q8NDA8 1641 aa27.38■■□□□ 1.97
PAX6-212ENST00000455099 PTPRKQ15262 1439 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms